RNA–Protein interactions for RNA: ENST00000473376.1

CHD3-209, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 2

Gene CHD3, Length 562 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-209ENST00000473376 TIMM17AQ99595 171 aa8.12□□□□□ -1.11
CHD3-209ENST00000473376 LOC389332A0A1B0GUA5 103 aa8.11□□□□□ -1.11
CHD3-209ENST00000473376 F8VRH5 84 aa8.11□□□□□ -1.11
CHD3-209ENST00000473376 ALKBH7Q9BT30 221 aaPredicted RBP8.11□□□□□ -1.11
CHD3-209ENST00000473376 C22orf24Q9Y442 160 aa8.1□□□□□ -1.11
CHD3-209ENST00000473376 A0A1B0GVG6 124 aa8.08□□□□□ -1.12
CHD3-209ENST00000473376 TOMM6Q96B49 74 aa8.08□□□□□ -1.12
CHD3-209ENST00000473376 CTDSP1Q9GZU7 261 aa8.08□□□□□ -1.12
CHD3-209ENST00000473376 GEMIN7Q9H840 131 aaKnown RBP8.08□□□□□ -1.12
CHD3-209ENST00000473376 CDKN2A-AS1Q9UH64 79 aa8.08□□□□□ -1.12
CHD3-209ENST00000473376 RPL28P46779 137 aaKnown RBP8.07□□□□□ -1.12
CHD3-209ENST00000473376 ERASQ7Z444 233 aa8.07□□□□□ -1.12
CHD3-209ENST00000473376 TOMM7Q9P0U1 55 aa8.07□□□□□ -1.12
CHD3-209ENST00000473376 TRAV9-1A0A075B6T8 112 aa8.06□□□□□ -1.12
CHD3-209ENST00000473376 PDZD11Q5EBL8 140 aa8.06□□□□□ -1.12
CHD3-209ENST00000473376 MRPL55Q7Z7F7 128 aaKnown RBP8.06□□□□□ -1.12
CHD3-209ENST00000473376 IGLV5-45A0A087WSX0 123 aa8.05□□□□□ -1.12
CHD3-209ENST00000473376 TINCRA0A1B0GVN0 87 aa8.05□□□□□ -1.12
CHD3-209ENST00000473376 LINC01546A6NGU7 62 aa8.05□□□□□ -1.12
CHD3-209ENST00000473376 BCE1O60756 84 aa8.05□□□□□ -1.12
CHD3-209ENST00000473376 RAB14P61106 215 aa8.05□□□□□ -1.12
CHD3-209ENST00000473376 CTAG1AP78358 180 aa8.05□□□□□ -1.12
CHD3-209ENST00000473376 ZC2HC1BQ5TFG8 222 aa8.05□□□□□ -1.12
CHD3-209ENST00000473376 XAGE1AQ9HD64 81 aa8.04□□□□□ -1.12
CHD3-209ENST00000473376 IGLV5-37A0A075B6J1 123 aa8.03□□□□□ -1.12
CHD3-209ENST00000473376 SMIM1B2RUZ4 78 aa8.03□□□□□ -1.12
CHD3-209ENST00000473376 LINC00469Q8N7U9 141 aa8.03□□□□□ -1.12
CHD3-209ENST00000473376 CRYGAP11844 174 aa8.02□□□□□ -1.13
CHD3-209ENST00000473376 PRR4Q16378 134 aa8.02□□□□□ -1.13
CHD3-209ENST00000473376 SCGB3A1Q96QR1 104 aa8.02□□□□□ -1.13
CHD3-209ENST00000473376 MRPL18Q9H0U6 180 aaKnown RBP8.02□□□□□ -1.13
CHD3-209ENST00000473376 LPAP08519 4548 aa8.01□□□□□ -1.13
CHD3-209ENST00000473376 COX19Q49B96 90 aa8.01□□□□□ -1.13
CHD3-209ENST00000473376 COX7B2Q8TF08 81 aa8.01□□□□□ -1.13
CHD3-209ENST00000473376 A0A0U1RQV1 116 aa8□□□□□ -1.13
CHD3-209ENST00000473376 FAM229BQ4G0N7 80 aa8□□□□□ -1.13
CHD3-209ENST00000473376 UQCC3Q6UW78 93 aa8□□□□□ -1.13
CHD3-209ENST00000473376 LINC00167Q96N53 147 aa8□□□□□ -1.13
CHD3-209ENST00000473376 GNB1LQ9BYB4 327 aa8□□□□□ -1.13
CHD3-209ENST00000473376 CST9LQ9H4G1 147 aa7.99□□□□□ -1.13
CHD3-209ENST00000473376 PMVKQ15126 192 aa7.98□□□□□ -1.13
CHD3-209ENST00000473376 CLLU1Q5K131 121 aa7.98□□□□□ -1.13
CHD3-209ENST00000473376 KRTAP13-1Q8IUC0 172 aa7.98□□□□□ -1.13
CHD3-209ENST00000473376 TYMSOSQ8TAI1 123 aa7.98□□□□□ -1.13
CHD3-209ENST00000473376 A0A087X002 238 aa7.97□□□□□ -1.13
CHD3-209ENST00000473376 H3BRM9 83 aa7.97□□□□□ -1.13
CHD3-209ENST00000473376 ATP5LO75964 103 aa7.96□□□□□ -1.14
CHD3-209ENST00000473376 ADCYAP1P18509 176 aa7.96□□□□□ -1.14
CHD3-209ENST00000473376 COX17Q14061 63 aa7.96□□□□□ -1.14
CHD3-209ENST00000473376 SFTA2Q6UW10 78 aa7.96□□□□□ -1.14
CHD3-209ENST00000473376 IGLV5-39A0A0G2JS06 123 aa7.95□□□□□ -1.14
CHD3-209ENST00000473376 S100PP25815 95 aa7.95□□□□□ -1.14
CHD3-209ENST00000473376 KIAA1644Q3SXP7 199 aa7.95□□□□□ -1.14
CHD3-209ENST00000473376 NKAPP1Q8N9T2 125 aa7.95□□□□□ -1.14
CHD3-209ENST00000473376 TMEM218A2RU14 115 aa7.94□□□□□ -1.14
CHD3-209ENST00000473376 RPL37AP8A6NKH3 93 aa7.94□□□□□ -1.14
CHD3-209ENST00000473376 IGLC3P0DOY3 106 aa7.93□□□□□ -1.14
CHD3-209ENST00000473376 UBE2AP49459 152 aa7.93□□□□□ -1.14
CHD3-209ENST00000473376 SEC11CQ9BY50 192 aa7.93□□□□□ -1.14
CHD3-209ENST00000473376 MUC2Q02817 5179 aa7.92□□□□□ -1.14
CHD3-209ENST00000473376 TSPAN13O95857 204 aa7.92□□□□□ -1.14
CHD3-209ENST00000473376 SPINK8P0C7L1 97 aa7.92□□□□□ -1.14
CHD3-209ENST00000473376 RPL24P83731 157 aaKnown RBP7.92□□□□□ -1.14
CHD3-209ENST00000473376 FA2HQ7L5A8 372 aa7.92□□□□□ -1.14
CHD3-209ENST00000473376 SMCO4Q9NRQ5 59 aa7.92□□□□□ -1.14
CHD3-209ENST00000473376 GAGE10A6NGK3 116 aa7.9□□□□□ -1.14
CHD3-209ENST00000473376 RAB5BP61020 215 aa7.9□□□□□ -1.14
CHD3-209ENST00000473376 KRTAP13-2Q52LG2 175 aa7.9□□□□□ -1.14
CHD3-209ENST00000473376 VPREB1P12018 145 aa7.89□□□□□ -1.15
CHD3-209ENST00000473376 TPRXLQ17RH7 258 aa7.89□□□□□ -1.15
CHD3-209ENST00000473376 LINC00304Q8N9R0 145 aa7.89□□□□□ -1.15
CHD3-209ENST00000473376 IGKV2D-26A0A0A0MRZ7 120 aa7.88□□□□□ -1.15
CHD3-209ENST00000473376 TMEM126AQ9H061 195 aa7.88□□□□□ -1.15
CHD3-209ENST00000473376 SND1-IT1Q9HBX3 110 aa7.88□□□□□ -1.15
CHD3-209ENST00000473376 ERG28Q9UKR5 140 aa7.88□□□□□ -1.15
CHD3-209ENST00000473376 ZNF22P17026 224 aaPredicted RBP7.87□□□□□ -1.15
CHD3-209ENST00000473376 FABP9Q0Z7S8 132 aa7.87□□□□□ -1.15
CHD3-209ENST00000473376 RHEBQ15382 184 aa7.87□□□□□ -1.15
CHD3-209ENST00000473376 IGKV2-28A0A075B6P5 120 aa7.86□□□□□ -1.15
CHD3-209ENST00000473376 A0A096LNJ9 63 aa7.86□□□□□ -1.15
CHD3-209ENST00000473376 IGKV2D-28P01615 120 aa7.86□□□□□ -1.15
CHD3-209ENST00000473376 LINC00614P0C842 121 aa7.86□□□□□ -1.15
CHD3-209ENST00000473376 PFN2P35080 140 aa7.86□□□□□ -1.15
CHD3-209ENST00000473376 C10orf91Q5T1B1 145 aa7.86□□□□□ -1.15
CHD3-209ENST00000473376 SPAG11AQ6PDA7 123 aa7.86□□□□□ -1.15
CHD3-209ENST00000473376 M0R378 163 aa7.85□□□□□ -1.15
CHD3-209ENST00000473376 HBDP02042 147 aa7.85□□□□□ -1.15
CHD3-209ENST00000473376 FAM19A1Q7Z5A9 133 aa7.85□□□□□ -1.15
CHD3-209ENST00000473376 PLEKHB2Q96CS7 222 aa7.85□□□□□ -1.15
CHD3-209ENST00000473376 ANAPC11Q9NYG5 84 aa7.85□□□□□ -1.15
CHD3-209ENST00000473376 C18orf32Q8TCD1 76 aa7.83□□□□□ -1.16
CHD3-209ENST00000473376 ZNF625Q96I27 306 aaPredicted RBP7.83□□□□□ -1.16
CHD3-209ENST00000473376 NDUFA6P56556 154 aa7.82□□□□□ -1.16
CHD3-209ENST00000473376 PRLHP81277 87 aa7.82□□□□□ -1.16
CHD3-209ENST00000473376 LCE2AQ5TA79 106 aaPredicted RBP7.82□□□□□ -1.16
CHD3-209ENST00000473376 IGLV7-46A0A075B6I9 117 aa7.81□□□□□ -1.16
CHD3-209ENST00000473376 TMEM238C9JI98 176 aa7.81□□□□□ -1.16
CHD3-209ENST00000473376 SCO1O75880 301 aa7.81□□□□□ -1.16
CHD3-209ENST00000473376 CBLN2Q8IUK8 224 aa7.81□□□□□ -1.16
CHD3-209ENST00000473376 URB1-AS1Q96HZ7 61 aa7.81□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 88 ms