RNA–Protein interactions for RNA: ENST00000472789.1

SMARCD3-208, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 3, humanhuman

TSL 2

Gene SMARCD3, Length 863 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD3-208ENST00000472789 FOXI1Q12951 378 aa7.02□□□□□ -1.29
SMARCD3-208ENST00000472789 C6orf226Q5I0X4 101 aa7.02□□□□□ -1.29
SMARCD3-208ENST00000472789 MIEN1Q9BRT3 115 aa7.02□□□□□ -1.29
SMARCD3-208ENST00000472789 A0A087WTM6 91 aa7.01□□□□□ -1.29
SMARCD3-208ENST00000472789 ZNF815PA8K554 130 aa7.01□□□□□ -1.29
SMARCD3-208ENST00000472789 LINC00587B1AMM8 73 aa7.01□□□□□ -1.29
SMARCD3-208ENST00000472789 LECT2O14960 151 aa7.01□□□□□ -1.29
SMARCD3-208ENST00000472789 CXCL5P42830 114 aa7.01□□□□□ -1.29
SMARCD3-208ENST00000472789 BOD1L2Q8IYS8 172 aa7.01□□□□□ -1.29
SMARCD3-208ENST00000472789 COX7B2Q8TF08 81 aa7.01□□□□□ -1.29
SMARCD3-208ENST00000472789 PRO1933Q9H354 126 aa7.01□□□□□ -1.29
SMARCD3-208ENST00000472789 TOMM7Q9P0U1 55 aa7.01□□□□□ -1.29
SMARCD3-208ENST00000472789 IGKV2D-26A0A0A0MRZ7 120 aa7□□□□□ -1.29
SMARCD3-208ENST00000472789 CKS1BP61024 79 aa7□□□□□ -1.29
SMARCD3-208ENST00000472789 HERV-K104P63124 156 aa7□□□□□ -1.29
SMARCD3-208ENST00000472789 CIRBPQ14011 172 aaKnown RBP7□□□□□ -1.29
SMARCD3-208ENST00000472789 SCGB1D4Q6XE38 83 aa7□□□□□ -1.29
SMARCD3-208ENST00000472789 Q8IZM0 81 aa7□□□□□ -1.29
SMARCD3-208ENST00000472789 NDUFA12Q9UI09 145 aa7□□□□□ -1.29
SMARCD3-208ENST00000472789 F8WDY8 70 aa6.99□□□□□ -1.29
SMARCD3-208ENST00000472789 ZNF561-AS1K7EIQ3 104 aa6.99□□□□□ -1.29
SMARCD3-208ENST00000472789 FUSP35637 526 aaKnown RBP eCLIP6.99□□□□□ -1.29
SMARCD3-208ENST00000472789 PCP2Q8IVA1 136 aa6.99□□□□□ -1.29
SMARCD3-208ENST00000472789 ORAOV1Q8WV07 137 aa6.99□□□□□ -1.29
SMARCD3-208ENST00000472789 KRTAP4-5Q9BYR2 181 aa6.99□□□□□ -1.29
SMARCD3-208ENST00000472789 LRP1BQ9NZR2 4599 aa6.98□□□□□ -1.29
SMARCD3-208ENST00000472789 C16orf90A8MZG2 172 aa6.98□□□□□ -1.29
SMARCD3-208ENST00000472789 NDUFA1O15239 70 aa6.98□□□□□ -1.29
SMARCD3-208ENST00000472789 GCSHP23434 173 aa6.98□□□□□ -1.29
SMARCD3-208ENST00000472789 HNRNPA3P51991 378 aaKnown RBP6.98□□□□□ -1.29
SMARCD3-208ENST00000472789 KRTAP10-2P60368 255 aa6.98□□□□□ -1.29
SMARCD3-208ENST00000472789 MAPKAPK5-AS1Q8N8E1 139 aa6.98□□□□□ -1.29
SMARCD3-208ENST00000472789 LRCOL1A6NCL2 159 aa6.97□□□□□ -1.29
SMARCD3-208ENST00000472789 WFDC2Q14508 124 aa6.97□□□□□ -1.29
SMARCD3-208ENST00000472789 C14orf177Q52M58 125 aa6.97□□□□□ -1.29
SMARCD3-208ENST00000472789 HIGD1BQ9P298 99 aa6.97□□□□□ -1.29
SMARCD3-208ENST00000472789 IGLV2-33A0A075B6J2 118 aaPredicted RBP6.96□□□□□ -1.3
SMARCD3-208ENST00000472789 PCP4L1A6NKN8 68 aa6.96□□□□□ -1.3
SMARCD3-208ENST00000472789 DDTP30046 118 aa6.96□□□□□ -1.3
SMARCD3-208ENST00000472789 SPAG11BQ08648 103 aa6.96□□□□□ -1.3
SMARCD3-208ENST00000472789 KRTAP26-1Q6PEX3 210 aa6.96□□□□□ -1.3
SMARCD3-208ENST00000472789 APOBP04114 4563 aaKnown RBP6.95□□□□□ -1.3
SMARCD3-208ENST00000472789 IGLV5-52A0A0A0MRZ9 124 aa6.95□□□□□ -1.3
SMARCD3-208ENST00000472789 TMEM238C9JI98 176 aa6.95□□□□□ -1.3
SMARCD3-208ENST00000472789 USP17L23D6RBM5 183 aa6.95□□□□□ -1.3
SMARCD3-208ENST00000472789 TSPEAR-AS2P59090 65 aa6.95□□□□□ -1.3
SMARCD3-208ENST00000472789 MEIG1Q5JSS6 88 aa6.95□□□□□ -1.3
SMARCD3-208ENST00000472789 Q8N814 137 aa6.95□□□□□ -1.3
SMARCD3-208ENST00000472789 COPS9Q8WXC6 57 aa6.95□□□□□ -1.3
SMARCD3-208ENST00000472789 C2orf48Q96LS8 159 aa6.95□□□□□ -1.3
SMARCD3-208ENST00000472789 TTTY13Q9BZ97 58 aa6.95□□□□□ -1.3
SMARCD3-208ENST00000472789 PGPEP1Q9NXJ5 209 aa6.95□□□□□ -1.3
SMARCD3-208ENST00000472789 TIMM17BO60830 172 aa6.94□□□□□ -1.3
SMARCD3-208ENST00000472789 SRSF9Q13242 221 aaKnown RBP eCLIP6.94□□□□□ -1.3
SMARCD3-208ENST00000472789 Q6ZVH6 145 aa6.94□□□□□ -1.3
SMARCD3-208ENST00000472789 ZNF625Q96I27 306 aaPredicted RBP6.94□□□□□ -1.3
SMARCD3-208ENST00000472789 GVQW2A0A096LPI5 108 aaPredicted RBP6.93□□□□□ -1.3
SMARCD3-208ENST00000472789 A0A0J9YXY3 114 aa6.93□□□□□ -1.3
SMARCD3-208ENST00000472789 COX17Q14061 63 aa6.93□□□□□ -1.3
SMARCD3-208ENST00000472789 KIAA0087Q14695 138 aa6.93□□□□□ -1.3
SMARCD3-208ENST00000472789 TAL2Q16559 108 aa6.93□□□□□ -1.3
SMARCD3-208ENST00000472789 CAMK2N2Q96S95 79 aa6.93□□□□□ -1.3
SMARCD3-208ENST00000472789 HIST1H4GQ99525 98 aa6.93□□□□□ -1.3
SMARCD3-208ENST00000472789 DNAH5Q8TE73 4624 aa6.92□□□□□ -1.3
SMARCD3-208ENST00000472789 TRBV30A0A0K0K1B3 111 aa6.92□□□□□ -1.3
SMARCD3-208ENST00000472789 M0R143 59 aa6.92□□□□□ -1.3
SMARCD3-208ENST00000472789 NTN5Q8WTR8 489 aaPredicted RBP6.92□□□□□ -1.3
SMARCD3-208ENST00000472789 SPANXB1Q9NS25 103 aaPredicted RBP6.92□□□□□ -1.3
SMARCD3-208ENST00000472789 TRAV16A0A0A6YYK6 109 aaPredicted RBP6.91□□□□□ -1.3
SMARCD3-208ENST00000472789 LINC00158P58513 81 aa6.91□□□□□ -1.3
SMARCD3-208ENST00000472789 CTAG1AP78358 180 aa6.91□□□□□ -1.3
SMARCD3-208ENST00000472789 HSD52Q0P140 79 aa6.91□□□□□ -1.3
SMARCD3-208ENST00000472789 HIGD2BQ4VC39 106 aa6.91□□□□□ -1.3
SMARCD3-208ENST00000472789 C15orf56Q8N910 161 aa6.91□□□□□ -1.3
SMARCD3-208ENST00000472789 IFITM1P13164 125 aa6.9□□□□□ -1.3
SMARCD3-208ENST00000472789 SYCNQ0VAF6 134 aa6.9□□□□□ -1.3
SMARCD3-208ENST00000472789 C2orf82Q6UX34 121 aa6.9□□□□□ -1.3
SMARCD3-208ENST00000472789 C2orf91Q6ZV80 131 aa6.9□□□□□ -1.3
SMARCD3-208ENST00000472789 ERG28Q9UKR5 140 aa6.9□□□□□ -1.3
SMARCD3-208ENST00000472789 PKIGQ9Y2B9 76 aa6.9□□□□□ -1.3
SMARCD3-208ENST00000472789 TMEM238LA0A1B0GVL6 79 aa6.89□□□□□ -1.31
SMARCD3-208ENST00000472789 A6NJY4 79 aa6.89□□□□□ -1.31
SMARCD3-208ENST00000472789 RNF151Q2KHN1 245 aa6.89□□□□□ -1.31
SMARCD3-208ENST00000472789 SPANXDQ9BXN6 97 aa6.89□□□□□ -1.31
SMARCD3-208ENST00000472789 SPANXCQ9NY87 97 aa6.89□□□□□ -1.31
SMARCD3-208ENST00000472789 SMIM13P0DJ93 91 aa6.88□□□□□ -1.31
SMARCD3-208ENST00000472789 PFN2P35080 140 aa6.88□□□□□ -1.31
SMARCD3-208ENST00000472789 PTTG1IPP53801 180 aa6.88□□□□□ -1.31
SMARCD3-208ENST00000472789 RPL24P83731 157 aaKnown RBP6.88□□□□□ -1.31
SMARCD3-208ENST00000472789 LINC01620Q4KN68 170 aa6.88□□□□□ -1.31
SMARCD3-208ENST00000472789 UNQ6190/PRO20217Q6UXQ8 127 aa6.88□□□□□ -1.31
SMARCD3-208ENST00000472789 CARD19Q96LW7 228 aa6.88□□□□□ -1.31
SMARCD3-208ENST00000472789 TP73-AS1Q9UF72 201 aa6.88□□□□□ -1.31
SMARCD3-208ENST00000472789 KRTAP10-1P60331 282 aa6.87□□□□□ -1.31
SMARCD3-208ENST00000472789 CEND1Q8N111 149 aa6.87□□□□□ -1.31
SMARCD3-208ENST00000472789 LINC00526Q96FQ7 95 aa6.87□□□□□ -1.31
SMARCD3-208ENST00000472789 A0A0U1RRA0 63 aa6.86□□□□□ -1.31
SMARCD3-208ENST00000472789 A6NDN8 102 aa6.86□□□□□ -1.31
SMARCD3-208ENST00000472789 PPDPFQ9H3Y8 114 aa6.86□□□□□ -1.31
SMARCD3-208ENST00000472789 HINT1P49773 126 aaPredicted RBP6.85□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms