RNA–Protein interactions for RNA: ENST00000472729.1

COMMD1-208, Transcript of copper metabolism domain containing 1, humanhuman

TSL 3

Gene COMMD1, Length 629 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD1-208ENST00000472729 CDKN2A-AS1Q9UH64 79 aa12.09□□□□□ -0.47
COMMD1-208ENST00000472729 PHF5AQ7RTV0 110 aaKnown RBP12.08□□□□□ -0.48
COMMD1-208ENST00000472729 Q8IZM0 81 aa12.08□□□□□ -0.48
COMMD1-208ENST00000472729 LRP1Q07954 4544 aaKnown RBP12.07□□□□□ -0.48
COMMD1-208ENST00000472729 FAM19A5Q7Z5A7 132 aaPredicted RBP12.07□□□□□ -0.48
COMMD1-208ENST00000472729 LINC01546A6NGU7 62 aa12.06□□□□□ -0.48
COMMD1-208ENST00000472729 C1orf137Q5JT78 98 aa12.06□□□□□ -0.48
COMMD1-208ENST00000472729 TINCRA0A1B0GVN0 87 aa12.05□□□□□ -0.48
COMMD1-208ENST00000472729 NDUFA6P56556 154 aa12.05□□□□□ -0.48
COMMD1-208ENST00000472729 UBE2BP63146 152 aa12.05□□□□□ -0.48
COMMD1-208ENST00000472729 PMVKQ15126 192 aa12.05□□□□□ -0.48
COMMD1-208ENST00000472729 CST9LQ9H4G1 147 aa12.05□□□□□ -0.48
COMMD1-208ENST00000472729 PSORS1C2Q9UIG4 136 aa12.05□□□□□ -0.48
COMMD1-208ENST00000472729 CXCL5P42830 114 aa12.04□□□□□ -0.48
COMMD1-208ENST00000472729 PLA2G2DQ9UNK4 145 aa12.04□□□□□ -0.48
COMMD1-208ENST00000472729 FAM168BA1KXE4 195 aa12.03□□□□□ -0.48
COMMD1-208ENST00000472729 F8VRH5 84 aa12.03□□□□□ -0.48
COMMD1-208ENST00000472729 H3BRM9 83 aa12.03□□□□□ -0.48
COMMD1-208ENST00000472729 LINC00614P0C842 121 aa12.03□□□□□ -0.48
COMMD1-208ENST00000472729 RAB5BP61020 215 aa12.03□□□□□ -0.48
COMMD1-208ENST00000472729 M0QXV9 152 aa12.02□□□□□ -0.49
COMMD1-208ENST00000472729 PDZD11Q5EBL8 140 aa12.01□□□□□ -0.49
COMMD1-208ENST00000472729 LINC01600Q96MT4 127 aa12.01□□□□□ -0.49
COMMD1-208ENST00000472729 FAT3Q8TDW7 4589 aa12□□□□□ -0.49
COMMD1-208ENST00000472729 SRSF9Q13242 221 aaKnown RBP eCLIP12□□□□□ -0.49
COMMD1-208ENST00000472729 COX7B2Q8TF08 81 aa12□□□□□ -0.49
COMMD1-208ENST00000472729 HBDP02042 147 aa11.99□□□□□ -0.49
COMMD1-208ENST00000472729 SMIM1B2RUZ4 78 aa11.98□□□□□ -0.49
COMMD1-208ENST00000472729 MT1HL1P0DM35 61 aa11.98□□□□□ -0.49
COMMD1-208ENST00000472729 C18orf32Q8TCD1 76 aa11.98□□□□□ -0.49
COMMD1-208ENST00000472729 SPINK8P0C7L1 97 aa11.97□□□□□ -0.49
COMMD1-208ENST00000472729 C9orf129Q5T035 196 aaKnown RBP11.97□□□□□ -0.49
COMMD1-208ENST00000472729 IGLV5-45A0A087WSX0 123 aa11.96□□□□□ -0.49
COMMD1-208ENST00000472729 ATP5LO75964 103 aa11.96□□□□□ -0.49
COMMD1-208ENST00000472729 LBHQ53QV2 105 aaPredicted RBP11.96□□□□□ -0.49
COMMD1-208ENST00000472729 DIRC1Q969H9 104 aa11.96□□□□□ -0.49
COMMD1-208ENST00000472729 XAGE1AQ9HD64 81 aa11.96□□□□□ -0.49
COMMD1-208ENST00000472729 IGLV7-43P04211 117 aa11.95□□□□□ -0.5
COMMD1-208ENST00000472729 PMCHL1Q16048 86 aa11.94□□□□□ -0.5
COMMD1-208ENST00000472729 PKHD1L1Q86WI1 4243 aa11.92□□□□□ -0.5
COMMD1-208ENST00000472729 BAGE3Q86Y29 109 aa11.92□□□□□ -0.5
COMMD1-208ENST00000472729 IGLC3P0DOY3 106 aa11.91□□□□□ -0.5
COMMD1-208ENST00000472729 C22orf24Q9Y442 160 aa11.91□□□□□ -0.5
COMMD1-208ENST00000472729 A0A096LNJ9 63 aa11.89□□□□□ -0.51
COMMD1-208ENST00000472729 TMEM170BQ5T4T1 132 aa11.89□□□□□ -0.51
COMMD1-208ENST00000472729 KRTAP7-1Q8IUC3 87 aa11.89□□□□□ -0.51
COMMD1-208ENST00000472729 CHCHD1Q96BP2 118 aaKnown RBP11.89□□□□□ -0.51
COMMD1-208ENST00000472729 URB1-AS1Q96HZ7 61 aa11.89□□□□□ -0.51
COMMD1-208ENST00000472729 MRPL55Q7Z7F7 128 aaKnown RBP11.87□□□□□ -0.51
COMMD1-208ENST00000472729 HMCN2Q8NDA2 5059 aa11.87□□□□□ -0.51
COMMD1-208ENST00000472729 H0Y9J4 135 aa11.86□□□□□ -0.51
COMMD1-208ENST00000472729 NUPR1O60356 82 aa11.86□□□□□ -0.51
COMMD1-208ENST00000472729 ZNF22P17026 224 aaPredicted RBP11.86□□□□□ -0.51
COMMD1-208ENST00000472729 PFN2P35080 140 aa11.86□□□□□ -0.51
COMMD1-208ENST00000472729 KRTAP11-1Q8IUC1 163 aa11.86□□□□□ -0.51
COMMD1-208ENST00000472729 NKAPP1Q8N9T2 125 aa11.86□□□□□ -0.51
COMMD1-208ENST00000472729 TP73-AS1Q9UF72 201 aa11.86□□□□□ -0.51
COMMD1-208ENST00000472729 CHTOPQ9Y3Y2 248 aaKnown RBP11.86□□□□□ -0.51
COMMD1-208ENST00000472729 KRTAP10-8P60410 259 aa11.85□□□□□ -0.51
COMMD1-208ENST00000472729 SFTA2Q6UW10 78 aa11.85□□□□□ -0.51
COMMD1-208ENST00000472729 HSBP1O75506 76 aa11.84□□□□□ -0.51
COMMD1-208ENST00000472729 CBLN2Q8IUK8 224 aa11.84□□□□□ -0.51
COMMD1-208ENST00000472729 IGLV5-39A0A0G2JS06 123 aa11.83□□□□□ -0.52
COMMD1-208ENST00000472729 IFI27L1Q96BM0 104 aa11.82□□□□□ -0.52
COMMD1-208ENST00000472729 YPEL4Q96NS1 127 aa11.82□□□□□ -0.52
COMMD1-208ENST00000472729 C11orf86A6NJI1 115 aa11.81□□□□□ -0.52
COMMD1-208ENST00000472729 ODF1Q14990 250 aa11.81□□□□□ -0.52
COMMD1-208ENST00000472729 GAGE10A6NGK3 116 aa11.8□□□□□ -0.52
COMMD1-208ENST00000472729 ZNF861PO60384 105 aa11.8□□□□□ -0.52
COMMD1-208ENST00000472729 COX17Q14061 63 aa11.8□□□□□ -0.52
COMMD1-208ENST00000472729 ERG28Q9UKR5 140 aa11.8□□□□□ -0.52
COMMD1-208ENST00000472729 RPL37AP8A6NKH3 93 aa11.79□□□□□ -0.52
COMMD1-208ENST00000472729 RPL28P46779 137 aaKnown RBP11.79□□□□□ -0.52
COMMD1-208ENST00000472729 ZNF625Q96I27 306 aaPredicted RBP11.79□□□□□ -0.52
COMMD1-208ENST00000472729 TRAV12-1A0A0B4J245 112 aa11.78□□□□□ -0.52
COMMD1-208ENST00000472729 RPL24P83731 157 aaKnown RBP11.78□□□□□ -0.52
COMMD1-208ENST00000472729 PRR26Q8N8Z3 221 aa11.78□□□□□ -0.52
COMMD1-208ENST00000472729 LINC00167Q96N53 147 aa11.78□□□□□ -0.52
COMMD1-208ENST00000472729 IGLV1-50A0A075B6I6 118 aa11.77□□□□□ -0.53
COMMD1-208ENST00000472729 ATP6V1G1O75348 118 aa11.77□□□□□ -0.53
COMMD1-208ENST00000472729 TRGC2P03986 189 aa11.77□□□□□ -0.53
COMMD1-208ENST00000472729 H0Y8G0 127 aa11.76□□□□□ -0.53
COMMD1-208ENST00000472729 BCE1O60756 84 aa11.76□□□□□ -0.53
COMMD1-208ENST00000472729 SLC7A5P1Q8MH63 180 aa11.76□□□□□ -0.53
COMMD1-208ENST00000472729 FAM19A2Q8N3H0 131 aa11.76□□□□□ -0.53
COMMD1-208ENST00000472729 RPL13AP40429 203 aaKnown RBP11.75□□□□□ -0.53
COMMD1-208ENST00000472729 LINC00158P58513 81 aa11.75□□□□□ -0.53
COMMD1-208ENST00000472729 SND1-IT1Q9HBX3 110 aa11.75□□□□□ -0.53
COMMD1-208ENST00000472729 IGLV5-37A0A075B6J1 123 aa11.74□□□□□ -0.53
COMMD1-208ENST00000472729 UBE2AP49459 152 aa11.74□□□□□ -0.53
COMMD1-208ENST00000472729 LEPROTL1O95214 131 aa11.73□□□□□ -0.53
COMMD1-208ENST00000472729 TMEM223A0PJW6 202 aa11.72□□□□□ -0.53
COMMD1-208ENST00000472729 IGKV2-28A0A075B6P5 120 aa11.71□□□□□ -0.53
COMMD1-208ENST00000472729 IGKV2D-28P01615 120 aa11.71□□□□□ -0.53
COMMD1-208ENST00000472729 HSPB8Q9UJY1 196 aa11.71□□□□□ -0.53
COMMD1-208ENST00000472729 TNXBP22105 4242 aa11.7□□□□□ -0.54
COMMD1-208ENST00000472729 LINC00587B1AMM8 73 aa11.7□□□□□ -0.54
COMMD1-208ENST00000472729 SERF1AO75920 110 aa11.7□□□□□ -0.54
COMMD1-208ENST00000472729 MEIG1Q5JSS6 88 aa11.7□□□□□ -0.54
COMMD1-208ENST00000472729 A0A0U1RRA0 63 aa11.69□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms