RNA–Protein interactions for RNA: ENST00000471880.5

SSR4-208, Transcript of signal sequence receptor subunit 4, humanhuman

TSL 5

Gene SSR4, Length 785 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR4-208ENST00000471880 TRBV30A0A0K0K1B3 111 aa9.25□□□□□ -0.93
SSR4-208ENST00000471880 LINC00614P0C842 121 aa9.25□□□□□ -0.93
SSR4-208ENST00000471880 PMVKQ15126 192 aa9.25□□□□□ -0.93
SSR4-208ENST00000471880 Q6ZRP5 223 aa9.25□□□□□ -0.93
SSR4-208ENST00000471880 LINC01546A6NGU7 62 aa9.24□□□□□ -0.93
SSR4-208ENST00000471880 PHF5AQ7RTV0 110 aaKnown RBP9.24□□□□□ -0.93
SSR4-208ENST00000471880 FAM19A3Q7Z5A8 133 aa9.24□□□□□ -0.93
SSR4-208ENST00000471880 CST9LQ9H4G1 147 aa9.24□□□□□ -0.93
SSR4-208ENST00000471880 TINCRA0A1B0GVN0 87 aa9.23□□□□□ -0.93
SSR4-208ENST00000471880 FAM168BA1KXE4 195 aa9.23□□□□□ -0.93
SSR4-208ENST00000471880 RAB5BP61020 215 aa9.23□□□□□ -0.93
SSR4-208ENST00000471880 Q8IZM0 81 aa9.23□□□□□ -0.93
SSR4-208ENST00000471880 HBDP02042 147 aa9.22□□□□□ -0.93
SSR4-208ENST00000471880 SPINK8P0C7L1 97 aa9.22□□□□□ -0.93
SSR4-208ENST00000471880 TLX1NBP0CAT3 122 aa9.22□□□□□ -0.93
SSR4-208ENST00000471880 CBLN2Q8IUK8 224 aa9.22□□□□□ -0.93
SSR4-208ENST00000471880 NDUFC2-KCTD14E9PQ53 114 aa9.21□□□□□ -0.94
SSR4-208ENST00000471880 SLC7A5P1Q8MH63 180 aa9.21□□□□□ -0.94
SSR4-208ENST00000471880 SMIM1B2RUZ4 78 aa9.2□□□□□ -0.94
SSR4-208ENST00000471880 H3BRM9 83 aa9.2□□□□□ -0.94
SSR4-208ENST00000471880 COX7B2Q8TF08 81 aa9.2□□□□□ -0.94
SSR4-208ENST00000471880 URB1-AS1Q96HZ7 61 aa9.2□□□□□ -0.94
SSR4-208ENST00000471880 F8VRH5 84 aa9.19□□□□□ -0.94
SSR4-208ENST00000471880 UBE2BP63146 152 aa9.19□□□□□ -0.94
SSR4-208ENST00000471880 C1orf137Q5JT78 98 aa9.19□□□□□ -0.94
SSR4-208ENST00000471880 A0A096LNJ9 63 aa9.18□□□□□ -0.94
SSR4-208ENST00000471880 M0QXV9 152 aa9.18□□□□□ -0.94
SSR4-208ENST00000471880 ATP5LO75964 103 aa9.18□□□□□ -0.94
SSR4-208ENST00000471880 CXCL5P42830 114 aa9.18□□□□□ -0.94
SSR4-208ENST00000471880 PDZD11Q5EBL8 140 aa9.18□□□□□ -0.94
SSR4-208ENST00000471880 XAGE1AQ9HD64 81 aa9.18□□□□□ -0.94
SSR4-208ENST00000471880 PSORS1C2Q9UIG4 136 aa9.18□□□□□ -0.94
SSR4-208ENST00000471880 BAGE3Q86Y29 109 aa9.17□□□□□ -0.94
SSR4-208ENST00000471880 C9orf129Q5T035 196 aaKnown RBP9.16□□□□□ -0.94
SSR4-208ENST00000471880 YPEL4Q96NS1 127 aa9.16□□□□□ -0.94
SSR4-208ENST00000471880 IGLV5-45A0A087WSX0 123 aa9.15□□□□□ -0.94
SSR4-208ENST00000471880 TMEM170BQ5T4T1 132 aa9.15□□□□□ -0.94
SSR4-208ENST00000471880 REG3GQ6UW15 175 aa9.15□□□□□ -0.94
SSR4-208ENST00000471880 SPINK6Q6UWN8 80 aa9.15□□□□□ -0.94
SSR4-208ENST00000471880 HSBP1O75506 76 aa9.14□□□□□ -0.95
SSR4-208ENST00000471880 IGLC3P0DOY3 106 aa9.14□□□□□ -0.95
SSR4-208ENST00000471880 TRGC2P03986 189 aa9.13□□□□□ -0.95
SSR4-208ENST00000471880 ZNF22P17026 224 aaPredicted RBP9.13□□□□□ -0.95
SSR4-208ENST00000471880 CHCHD1Q96BP2 118 aaKnown RBP9.13□□□□□ -0.95
SSR4-208ENST00000471880 CHTOPQ9Y3Y2 248 aaKnown RBP9.13□□□□□ -0.95
SSR4-208ENST00000471880 H0Y8G0 127 aa9.12□□□□□ -0.95
SSR4-208ENST00000471880 MT1HL1P0DM35 61 aa9.12□□□□□ -0.95
SSR4-208ENST00000471880 SERTAD4-AS1Q5TG53 156 aa9.12□□□□□ -0.95
SSR4-208ENST00000471880 C11orf86A6NJI1 115 aa9.11□□□□□ -0.95
SSR4-208ENST00000471880 PFN2P35080 140 aa9.11□□□□□ -0.95
SSR4-208ENST00000471880 FAM19A2Q8N3H0 131 aa9.11□□□□□ -0.95
SSR4-208ENST00000471880 IFI27L1Q96BM0 104 aa9.11□□□□□ -0.95
SSR4-208ENST00000471880 KRTAP11-1Q8IUC1 163 aa9.1□□□□□ -0.95
SSR4-208ENST00000471880 KRTAP7-1Q8IUC3 87 aa9.1□□□□□ -0.95
SSR4-208ENST00000471880 IGLV7-43P04211 117 aa9.09□□□□□ -0.95
SSR4-208ENST00000471880 SRSF9Q13242 221 aaKnown RBP eCLIP9.09□□□□□ -0.95
SSR4-208ENST00000471880 ZNF625Q96I27 306 aaPredicted RBP9.09□□□□□ -0.95
SSR4-208ENST00000471880 C22orf24Q9Y442 160 aa9.09□□□□□ -0.95
SSR4-208ENST00000471880 LBHQ53QV2 105 aaPredicted RBP9.08□□□□□ -0.96
SSR4-208ENST00000471880 HMCN2Q8NDA2 5059 aa9.07□□□□□ -0.96
SSR4-208ENST00000471880 IGLV5-39A0A0G2JS06 123 aa9.07□□□□□ -0.96
SSR4-208ENST00000471880 GAGE10A6NGK3 116 aa9.07□□□□□ -0.96
SSR4-208ENST00000471880 LINC01600Q96MT4 127 aa9.07□□□□□ -0.96
SSR4-208ENST00000471880 SERF1AO75920 110 aa9.06□□□□□ -0.96
SSR4-208ENST00000471880 MRPL55Q7Z7F7 128 aaKnown RBP9.06□□□□□ -0.96
SSR4-208ENST00000471880 NKAPP1Q8N9T2 125 aa9.06□□□□□ -0.96
SSR4-208ENST00000471880 DIRC1Q969H9 104 aa9.06□□□□□ -0.96
SSR4-208ENST00000471880 PLA2G2DQ9UNK4 145 aa9.06□□□□□ -0.96
SSR4-208ENST00000471880 ERG28Q9UKR5 140 aa9.05□□□□□ -0.96
SSR4-208ENST00000471880 TRAV12-1A0A0B4J245 112 aa9.04□□□□□ -0.96
SSR4-208ENST00000471880 RPL37AP8A6NKH3 93 aa9.04□□□□□ -0.96
SSR4-208ENST00000471880 LEPROTL1O95214 131 aa9.04□□□□□ -0.96
SSR4-208ENST00000471880 FABP4P15090 132 aa9.04□□□□□ -0.96
SSR4-208ENST00000471880 A0A0U1RRA0 63 aa9.03□□□□□ -0.96
SSR4-208ENST00000471880 ODF1Q14990 250 aa9.03□□□□□ -0.96
SSR4-208ENST00000471880 COLCA2A8K830 154 aa9.02□□□□□ -0.97
SSR4-208ENST00000471880 SCO1O75880 301 aa9.02□□□□□ -0.97
SSR4-208ENST00000471880 LINC00158P58513 81 aa9.02□□□□□ -0.97
SSR4-208ENST00000471880 TNXBP22105 4242 aa9.01□□□□□ -0.97
SSR4-208ENST00000471880 TMEM223A0PJW6 202 aa9.01□□□□□ -0.97
SSR4-208ENST00000471880 H0Y9J4 135 aa9.01□□□□□ -0.97
SSR4-208ENST00000471880 ATP6V1G1O75348 118 aa9.01□□□□□ -0.97
SSR4-208ENST00000471880 SFTA2Q6UW10 78 aa9.01□□□□□ -0.97
SSR4-208ENST00000471880 LINC00167Q96N53 147 aa9.01□□□□□ -0.97
SSR4-208ENST00000471880 TP73-AS1Q9UF72 201 aa9.01□□□□□ -0.97
SSR4-208ENST00000471880 NUPR1O60356 82 aa9□□□□□ -0.97
SSR4-208ENST00000471880 MEIG1Q5JSS6 88 aa9□□□□□ -0.97
SSR4-208ENST00000471880 SND1-IT1Q9HBX3 110 aa9□□□□□ -0.97
SSR4-208ENST00000471880 HSPB8Q9UJY1 196 aa9□□□□□ -0.97
SSR4-208ENST00000471880 LINC00310P59036 64 aa8.99□□□□□ -0.97
SSR4-208ENST00000471880 COX17Q14061 63 aa8.99□□□□□ -0.97
SSR4-208ENST00000471880 IGKV2-28A0A075B6P5 120 aa8.98□□□□□ -0.97
SSR4-208ENST00000471880 IGKV2D-28P01615 120 aa8.98□□□□□ -0.97
SSR4-208ENST00000471880 PMCHL2Q9BQD1 86 aa8.98□□□□□ -0.97
SSR4-208ENST00000471880 RPL24P83731 157 aaKnown RBP8.97□□□□□ -0.97
SSR4-208ENST00000471880 PRR26Q8N8Z3 221 aa8.97□□□□□ -0.97
SSR4-208ENST00000471880 ZNF861PO60384 105 aa8.96□□□□□ -0.98
SSR4-208ENST00000471880 BCE1O60756 84 aa8.96□□□□□ -0.98
SSR4-208ENST00000471880 RPL28P46779 137 aaKnown RBP8.96□□□□□ -0.98
SSR4-208ENST00000471880 UBE2AP49459 152 aa8.96□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 57.2 ms