RNA–Protein interactions for RNA: ENST00000471250.5

U2AF1-208, Transcript of U2 small nuclear RNA auxiliary factor 1, humanhuman

TSL 2

Gene U2AF1, Length 1,676 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1-208ENST00000471250 C1orf43Q9BWL3 253 aa17.39■□□□□ 0.37
U2AF1-208ENST00000471250 CFAP161Q6P656 301 aa17.38■□□□□ 0.37
U2AF1-208ENST00000471250 RPL24P83731 157 aaKnown RBP17.37■□□□□ 0.37
U2AF1-208ENST00000471250 COX11Q9Y6N1 276 aa17.37■□□□□ 0.37
U2AF1-208ENST00000471250 K7ERJ3 54 aa17.36■□□□□ 0.37
U2AF1-208ENST00000471250 IFITM1P13164 125 aa17.36■□□□□ 0.37
U2AF1-208ENST00000471250 CXCL5P42830 114 aa17.36■□□□□ 0.37
U2AF1-208ENST00000471250 CKS1BP61024 79 aa17.35■□□□□ 0.37
U2AF1-208ENST00000471250 DAND5Q8N907 189 aa17.35■□□□□ 0.37
U2AF1-208ENST00000471250 A0A0U1RRA0 63 aa17.34■□□□□ 0.37
U2AF1-208ENST00000471250 C2orf82Q6UX34 121 aa17.34■□□□□ 0.37
U2AF1-208ENST00000471250 RAB37Q96AX2 223 aa17.34■□□□□ 0.37
U2AF1-208ENST00000471250 IGKV2D-24A0A075B6R9 120 aa17.33■□□□□ 0.37
U2AF1-208ENST00000471250 A4D1N5 150 aa17.33■□□□□ 0.37
U2AF1-208ENST00000471250 SPAG11BQ08648 103 aa17.33■□□□□ 0.37
U2AF1-208ENST00000471250 UBE2DNLQ8IWF7 75 aa17.33■□□□□ 0.37
U2AF1-208ENST00000471250 Q9HAA7 133 aa17.32■□□□□ 0.36
U2AF1-208ENST00000471250 C9orf118A6NHY6 69 aa17.31■□□□□ 0.36
U2AF1-208ENST00000471250 NPC2P61916 151 aa17.31■□□□□ 0.36
U2AF1-208ENST00000471250 LINC00308Q8TCZ7 52 aa17.31■□□□□ 0.36
U2AF1-208ENST00000471250 CFC1BP0CG36 223 aa17.3■□□□□ 0.36
U2AF1-208ENST00000471250 CFC1P0CG37 223 aa17.3■□□□□ 0.36
U2AF1-208ENST00000471250 ERG28Q9UKR5 140 aa17.29■□□□□ 0.36
U2AF1-208ENST00000471250 COPS9Q8WXC6 57 aa17.29■□□□□ 0.36
U2AF1-208ENST00000471250 TRAV16A0A0A6YYK6 109 aaPredicted RBP17.28■□□□□ 0.36
U2AF1-208ENST00000471250 EIF4EBP3O60516 100 aaPredicted RBP17.28■□□□□ 0.36
U2AF1-208ENST00000471250 LINC00158P58513 81 aa17.28■□□□□ 0.36
U2AF1-208ENST00000471250 PPDPFQ9H3Y8 114 aa17.28■□□□□ 0.36
U2AF1-208ENST00000471250 C6orf223Q8N319 242 aa17.26■□□□□ 0.35
U2AF1-208ENST00000471250 MIR7-3HGQ8N6C7 128 aa17.26■□□□□ 0.35
U2AF1-208ENST00000471250 RMI2Q96E14 147 aa17.26■□□□□ 0.35
U2AF1-208ENST00000471250 SOSTDC1Q6X4U4 206 aa17.26■□□□□ 0.35
U2AF1-208ENST00000471250 NTN5Q8WTR8 489 aaPredicted RBP17.26■□□□□ 0.35
U2AF1-208ENST00000471250 A0A0B4J2C4 111 aa17.25■□□□□ 0.35
U2AF1-208ENST00000471250 PFN2P35080 140 aa17.25■□□□□ 0.35
U2AF1-208ENST00000471250 C15orf56Q8N910 161 aa17.25■□□□□ 0.35
U2AF1-208ENST00000471250 H3BUT2 72 aa17.24■□□□□ 0.35
U2AF1-208ENST00000471250 LINC00526Q96FQ7 95 aa17.24■□□□□ 0.35
U2AF1-208ENST00000471250 DNAH7Q8WXX0 4024 aa17.23■□□□□ 0.35
U2AF1-208ENST00000471250 UNQ6190/PRO20217Q6UXQ8 127 aa17.23■□□□□ 0.35
U2AF1-208ENST00000471250 NAA38Q9BRA0 125 aaKnown RBP17.23■□□□□ 0.35
U2AF1-208ENST00000471250 COX17Q14061 63 aa17.22■□□□□ 0.35
U2AF1-208ENST00000471250 C10orf25Q5T742 122 aa17.22■□□□□ 0.35
U2AF1-208ENST00000471250 ZNF561-AS1K7EIQ3 104 aa17.21■□□□□ 0.35
U2AF1-208ENST00000471250 HIGD2BQ4VC39 106 aa17.21■□□□□ 0.35
U2AF1-208ENST00000471250 PRO1854Q9UHT4 67 aa17.21■□□□□ 0.35
U2AF1-208ENST00000471250 KRTAP1-5Q9BYS1 174 aa17.2■□□□□ 0.34
U2AF1-208ENST00000471250 GVQW2A0A096LPI5 108 aaPredicted RBP17.19■□□□□ 0.34
U2AF1-208ENST00000471250 PGPEP1Q9NXJ5 209 aa17.19■□□□□ 0.34
U2AF1-208ENST00000471250 C2orf48Q96LS8 159 aa17.18■□□□□ 0.34
U2AF1-208ENST00000471250 VAMP3Q15836 100 aa17.17■□□□□ 0.34
U2AF1-208ENST00000471250 C9orf116Q5BN46 136 aaPredicted RBP17.17■□□□□ 0.34
U2AF1-208ENST00000471250 CSMD3Q7Z407 3707 aa17.17■□□□□ 0.34
U2AF1-208ENST00000471250 A0A1W2PPM0 123 aa17.16■□□□□ 0.34
U2AF1-208ENST00000471250 DNAH1Q9P2D7 4330 aa17.16■□□□□ 0.34
U2AF1-208ENST00000471250 F8WDY8 70 aa17.16■□□□□ 0.34
U2AF1-208ENST00000471250 TSPAN13O95857 204 aa17.16■□□□□ 0.34
U2AF1-208ENST00000471250 CASC10Q5T4H9 136 aa17.15■□□□□ 0.34
U2AF1-208ENST00000471250 MUC7Q8TAX7 377 aa17.15■□□□□ 0.34
U2AF1-208ENST00000471250 CAMK2N2Q96S95 79 aa17.15■□□□□ 0.34
U2AF1-208ENST00000471250 PLECQ15149 4684 aaKnown RBP17.15■□□□□ 0.34
U2AF1-208ENST00000471250 C6orf48Q9UBA6 75 aa17.14■□□□□ 0.33
U2AF1-208ENST00000471250 LOC107984156A0A0G2JMH3 177 aa17.13■□□□□ 0.33
U2AF1-208ENST00000471250 TRBV30A0A0K0K1B3 111 aa17.13■□□□□ 0.33
U2AF1-208ENST00000471250 ARL17AQ8IVW1 177 aa17.13■□□□□ 0.33
U2AF1-208ENST00000471250 FABP2P12104 132 aa17.11■□□□□ 0.33
U2AF1-208ENST00000471250 SND1-IT1Q9HBX3 110 aa17.11■□□□□ 0.33
U2AF1-208ENST00000471250 STARD9Q9P2P6 4700 aa17.11■□□□□ 0.33
U2AF1-208ENST00000471250 USP17L23D6RBM5 183 aa17.1■□□□□ 0.33
U2AF1-208ENST00000471250 TTC32Q5I0X7 151 aa17.1■□□□□ 0.33
U2AF1-208ENST00000471250 FBN3Q75N90 2809 aa17.1■□□□□ 0.33
U2AF1-208ENST00000471250 Q6ZRU5 148 aa17.1■□□□□ 0.33
U2AF1-208ENST00000471250 NBDYA0A0U1RRE5 68 aa17.09■□□□□ 0.33
U2AF1-208ENST00000471250 UBE2V1Q13404 147 aa17.07■□□□□ 0.32
U2AF1-208ENST00000471250 WWC2-AS2Q96NR7 200 aa17.07■□□□□ 0.32
U2AF1-208ENST00000471250 H7C2G1 150 aa17.05■□□□□ 0.32
U2AF1-208ENST00000471250 RPL13AP40429 203 aaKnown RBP17.05■□□□□ 0.32
U2AF1-208ENST00000471250 SYCNQ0VAF6 134 aa17.05■□□□□ 0.32
U2AF1-208ENST00000471250 GAGE10A6NGK3 116 aa17.04■□□□□ 0.32
U2AF1-208ENST00000471250 K7EP34 96 aa17.04■□□□□ 0.32
U2AF1-208ENST00000471250 SPCS1Q9Y6A9 102 aa17.04■□□□□ 0.32
U2AF1-208ENST00000471250 IGKV2-28A0A075B6P5 120 aa17.03■□□□□ 0.32
U2AF1-208ENST00000471250 IGKV2D-28P01615 120 aa17.03■□□□□ 0.32
U2AF1-208ENST00000471250 Q1RN00 199 aa17.03■□□□□ 0.32
U2AF1-208ENST00000471250 GTF2H5Q6ZYL4 71 aa17.03■□□□□ 0.32
U2AF1-208ENST00000471250 LYSTQ99698 3801 aa17.02■□□□□ 0.32
U2AF1-208ENST00000471250 TRAV13-2A0A0B4J235 113 aa17.01■□□□□ 0.31
U2AF1-208ENST00000471250 PSCAO43653 123 aa17■□□□□ 0.31
U2AF1-208ENST00000471250 NDUFC2O95298 119 aa17■□□□□ 0.31
U2AF1-208ENST00000471250 RNF151Q2KHN1 245 aa17■□□□□ 0.31
U2AF1-208ENST00000471250 VPS13DQ5THJ4 4388 aa16.99■□□□□ 0.31
U2AF1-208ENST00000471250 LECT2O14960 151 aa16.99■□□□□ 0.31
U2AF1-208ENST00000471250 PSMB2P49721 201 aa16.99■□□□□ 0.31
U2AF1-208ENST00000471250 LINC00337Q8N6G1 96 aa16.99■□□□□ 0.31
U2AF1-208ENST00000471250 SLPIP03973 132 aa16.98■□□□□ 0.31
U2AF1-208ENST00000471250 LYRM7Q5U5X0 104 aa16.98■□□□□ 0.31
U2AF1-208ENST00000471250 CARD19Q96LW7 228 aa16.98■□□□□ 0.31
U2AF1-208ENST00000471250 NDUFC2-KCTD14E9PQ53 114 aa16.97■□□□□ 0.31
U2AF1-208ENST00000471250 WFDC2Q14508 124 aa16.96■□□□□ 0.31
U2AF1-208ENST00000471250 TRIAP1O43715 76 aa16.94■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms