RNA–Protein interactions for RNA: ENST00000470994.1

GPNMB-208, Transcript of glycoprotein nmb, humanhuman

TSL 2

Gene GPNMB, Length 538 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPNMB-208ENST00000470994 KRTAP12-2P59991 146 aa3.5□□□□□ -1.85
GPNMB-208ENST00000470994 HBBP68871 147 aa3.5□□□□□ -1.85
GPNMB-208ENST00000470994 PRR4Q16378 134 aa3.5□□□□□ -1.85
GPNMB-208ENST00000470994 AKAP14Q86UN6 197 aa3.5□□□□□ -1.85
GPNMB-208ENST00000470994 OR10D4PQ8NGN7 298 aa3.5□□□□□ -1.85
GPNMB-208ENST00000470994 C20orf78Q9BR46 151 aa3.5□□□□□ -1.85
GPNMB-208ENST00000470994 TIMM21Q9BVV7 248 aa3.5□□□□□ -1.85
GPNMB-208ENST00000470994 MRPL35Q9NZE8 188 aaKnown RBP3.5□□□□□ -1.85
GPNMB-208ENST00000470994 TGIF2-C20orf24A0A0A6YYL0 155 aa3.49□□□□□ -1.85
GPNMB-208ENST00000470994 LINC00862A6NCI5 91 aa3.49□□□□□ -1.85
GPNMB-208ENST00000470994 D6R8Y8 96 aa3.49□□□□□ -1.85
GPNMB-208ENST00000470994 F8WDY8 70 aa3.49□□□□□ -1.85
GPNMB-208ENST00000470994 DSCR10P59022 87 aa3.49□□□□□ -1.85
GPNMB-208ENST00000470994 MRPL54Q6P161 138 aaKnown RBP3.49□□□□□ -1.85
GPNMB-208ENST00000470994 KRTAP11-1Q8IUC1 163 aa3.49□□□□□ -1.85
GPNMB-208ENST00000470994 PACRGQ96M98 296 aaPredicted RBP3.49□□□□□ -1.85
GPNMB-208ENST00000470994 SPANXA1Q9NS26 97 aa3.49□□□□□ -1.85
GPNMB-208ENST00000470994 C6orf48Q9UBA6 75 aa3.49□□□□□ -1.85
GPNMB-208ENST00000470994 RNF213Q63HN8 5207 aa3.49□□□□□ -1.85
GPNMB-208ENST00000470994 IGHV3OR16-9A0A0B4J2B5 98 aa3.48□□□□□ -1.85
GPNMB-208ENST00000470994 LOC389332A0A1B0GUA5 103 aa3.48□□□□□ -1.85
GPNMB-208ENST00000470994 F8W036 122 aa3.48□□□□□ -1.85
GPNMB-208ENST00000470994 H0Y9J4 135 aa3.48□□□□□ -1.85
GPNMB-208ENST00000470994 M0QXV9 152 aa3.48□□□□□ -1.85
GPNMB-208ENST00000470994 TSPAN13O95857 204 aa3.48□□□□□ -1.85
GPNMB-208ENST00000470994 NPYP01303 97 aa3.48□□□□□ -1.85
GPNMB-208ENST00000470994 S100A8P05109 93 aa3.48□□□□□ -1.85
GPNMB-208ENST00000470994 IFI27P40305 119 aaPredicted RBP3.48□□□□□ -1.85
GPNMB-208ENST00000470994 RPL23P62829 140 aaKnown RBP3.48□□□□□ -1.85
GPNMB-208ENST00000470994 FAM74A3Q4VXF1 159 aa3.48□□□□□ -1.85
GPNMB-208ENST00000470994 C2orf82Q6UX34 121 aa3.48□□□□□ -1.85
GPNMB-208ENST00000470994 SMIM2Q9BVW6 85 aa3.48□□□□□ -1.85
GPNMB-208ENST00000470994 TOMM7Q9P0U1 55 aa3.48□□□□□ -1.85
GPNMB-208ENST00000470994 NAT8Q9UHE5 227 aa3.48□□□□□ -1.85
GPNMB-208ENST00000470994 IGLV1-50A0A075B6I6 118 aa3.47□□□□□ -1.85
GPNMB-208ENST00000470994 TRBV24-1A0A075B6N3 115 aa3.47□□□□□ -1.85
GPNMB-208ENST00000470994 A0A1B0GW15 77 aa3.47□□□□□ -1.85
GPNMB-208ENST00000470994 SMIM27A0A1W2PRY6 76 aa3.47□□□□□ -1.85
GPNMB-208ENST00000470994 RPL32P62910 135 aaKnown RBP3.47□□□□□ -1.85
GPNMB-208ENST00000470994 MRPS36P82909 103 aaKnown RBP3.47□□□□□ -1.85
GPNMB-208ENST00000470994 TMEM136Q6ZRR5 245 aa3.47□□□□□ -1.85
GPNMB-208ENST00000470994 LINC00469Q8N7U9 141 aa3.47□□□□□ -1.85
GPNMB-208ENST00000470994 SMDT1Q9H4I9 107 aa3.47□□□□□ -1.85
GPNMB-208ENST00000470994 PKHD1L1Q86WI1 4243 aa3.47□□□□□ -1.85
GPNMB-208ENST00000470994 C9JQL5 133 aa3.46□□□□□ -1.86
GPNMB-208ENST00000470994 PPBPP02775 128 aa3.46□□□□□ -1.86
GPNMB-208ENST00000470994 TLX1NBP0CAT3 122 aa3.46□□□□□ -1.86
GPNMB-208ENST00000470994 CKS1BP61024 79 aa3.46□□□□□ -1.86
GPNMB-208ENST00000470994 KIAA0087Q14695 138 aa3.46□□□□□ -1.86
GPNMB-208ENST00000470994 PEA15Q15121 130 aa3.46□□□□□ -1.86
GPNMB-208ENST00000470994 C6orf226Q5I0X4 101 aa3.46□□□□□ -1.86
GPNMB-208ENST00000470994 LINC00242Q5T6M2 205 aa3.46□□□□□ -1.86
GPNMB-208ENST00000470994 TEX43Q6ZNM6 134 aa3.46□□□□□ -1.86
GPNMB-208ENST00000470994 ORMDL3Q8N138 153 aa3.46□□□□□ -1.86
GPNMB-208ENST00000470994 FAM104AQ969W3 186 aa3.46□□□□□ -1.86
GPNMB-208ENST00000470994 PRELID3AQ96N28 172 aa3.46□□□□□ -1.86
GPNMB-208ENST00000470994 C2orf88Q9BSF0 95 aa3.46□□□□□ -1.86
GPNMB-208ENST00000470994 VCX2Q9H322 139 aa3.46□□□□□ -1.86
GPNMB-208ENST00000470994 LRP2P98164 4655 aa3.46□□□□□ -1.86
GPNMB-208ENST00000470994 IGLV4-3A0A075B6K6 122 aa3.45□□□□□ -1.86
GPNMB-208ENST00000470994 TRBV30A0A0K0K1B3 111 aa3.45□□□□□ -1.86
GPNMB-208ENST00000470994 NDUFC2-KCTD14E9PQ53 114 aa3.45□□□□□ -1.86
GPNMB-208ENST00000470994 RPL13AP40429 203 aaKnown RBP3.45□□□□□ -1.86
GPNMB-208ENST00000470994 LBHQ53QV2 105 aaPredicted RBP3.45□□□□□ -1.86
GPNMB-208ENST00000470994 C9orf129Q5T035 196 aaKnown RBP3.45□□□□□ -1.86
GPNMB-208ENST00000470994 Q6ZN92 141 aa3.45□□□□□ -1.86
GPNMB-208ENST00000470994 TMEM141Q96I45 108 aa3.45□□□□□ -1.86
GPNMB-208ENST00000470994 CTDSP1Q9GZU7 261 aa3.45□□□□□ -1.86
GPNMB-208ENST00000470994 XAGE1AQ9HD64 81 aa3.45□□□□□ -1.86
GPNMB-208ENST00000470994 C22orf24Q9Y442 160 aa3.45□□□□□ -1.86
GPNMB-208ENST00000470994 ZNF861PO60384 105 aa3.44□□□□□ -1.86
GPNMB-208ENST00000470994 KRTAP1-4P0C5Y4 121 aa3.44□□□□□ -1.86
GPNMB-208ENST00000470994 C2orf66Q6UXQ4 117 aa3.44□□□□□ -1.86
GPNMB-208ENST00000470994 ALKBH7Q9BT30 221 aaPredicted RBP3.44□□□□□ -1.86
GPNMB-208ENST00000470994 MAP1LC3AQ9H492 121 aa3.44□□□□□ -1.86
GPNMB-208ENST00000470994 GEMIN7Q9H840 131 aaKnown RBP3.44□□□□□ -1.86
GPNMB-208ENST00000470994 CYSLTR1Q9Y271 337 aa3.44□□□□□ -1.86
GPNMB-208ENST00000470994 PYGO1Q9Y3Y4 419 aa3.44□□□□□ -1.86
GPNMB-208ENST00000470994 A0A1B0GXF2 115 aa3.43□□□□□ -1.86
GPNMB-208ENST00000470994 GAGE10A6NGK3 116 aa3.43□□□□□ -1.86
GPNMB-208ENST00000470994 CARHSP1Q9Y2V2 147 aaKnown RBP3.43□□□□□ -1.86
GPNMB-208ENST00000470994 TNXBP22105 4242 aa3.43□□□□□ -1.86
GPNMB-208ENST00000470994 A0A0U1RQV1 116 aa3.42□□□□□ -1.86
GPNMB-208ENST00000470994 RPL37AP8A6NKH3 93 aa3.42□□□□□ -1.86
GPNMB-208ENST00000470994 NUPR1O60356 82 aa3.42□□□□□ -1.86
GPNMB-208ENST00000470994 RPL28P46779 137 aaKnown RBP3.42□□□□□ -1.86
GPNMB-208ENST00000470994 RAB5BP61020 215 aa3.42□□□□□ -1.86
GPNMB-208ENST00000470994 ORMDL2Q53FV1 153 aa3.42□□□□□ -1.86
GPNMB-208ENST00000470994 LINC01561Q8N1V8 128 aa3.42□□□□□ -1.86
GPNMB-208ENST00000470994 Q8N8P6 123 aa3.42□□□□□ -1.86
GPNMB-208ENST00000470994 TYMSOSQ8TAI1 123 aa3.42□□□□□ -1.86
GPNMB-208ENST00000470994 ANAPC11Q9NYG5 84 aa3.42□□□□□ -1.86
GPNMB-208ENST00000470994 CRYGAP11844 174 aa3.41□□□□□ -1.86
GPNMB-208ENST00000470994 UBE2AP49459 152 aa3.41□□□□□ -1.86
GPNMB-208ENST00000470994 SEC11AP67812 179 aa3.41□□□□□ -1.86
GPNMB-208ENST00000470994 PAPPA-AS1Q5QFB9 102 aa3.41□□□□□ -1.86
GPNMB-208ENST00000470994 ATP5L2Q7Z4Y8 100 aa3.41□□□□□ -1.86
GPNMB-208ENST00000470994 MRPL55Q7Z7F7 128 aaKnown RBP3.41□□□□□ -1.86
GPNMB-208ENST00000470994 Q8IZM0 81 aa3.41□□□□□ -1.86
GPNMB-208ENST00000470994 AMELXQ99217 191 aa3.41□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 59.1 ms