RNA–Protein interactions for RNA: ENST00000469093.1

COL5A1-207, Transcript of collagen type V alpha 1 chain, humanhuman

TSL 3

Gene COL5A1, Length 670 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1-207ENST00000469093 FAM19A5Q7Z5A7 132 aaPredicted RBP7.36□□□□□ -1.23
COL5A1-207ENST00000469093 BAGE3Q86Y29 109 aa7.36□□□□□ -1.23
COL5A1-207ENST00000469093 C18orf32Q8TCD1 76 aa7.36□□□□□ -1.23
COL5A1-207ENST00000469093 SPANXA1Q9NS26 97 aa7.36□□□□□ -1.23
COL5A1-207ENST00000469093 KIAA0087Q14695 138 aa7.35□□□□□ -1.23
COL5A1-207ENST00000469093 CYSLTR1Q9Y271 337 aa7.34□□□□□ -1.23
COL5A1-207ENST00000469093 LINC01549A6NIU2 74 aa7.33□□□□□ -1.24
COL5A1-207ENST00000469093 IFITM10A6NMD0 228 aa7.33□□□□□ -1.24
COL5A1-207ENST00000469093 LINC00614P0C842 121 aa7.33□□□□□ -1.24
COL5A1-207ENST00000469093 M0QXV9 152 aa7.32□□□□□ -1.24
COL5A1-207ENST00000469093 HSBP1O75506 76 aa7.32□□□□□ -1.24
COL5A1-207ENST00000469093 PRR4Q16378 134 aa7.32□□□□□ -1.24
COL5A1-207ENST00000469093 C9orf129Q5T035 196 aaKnown RBP7.32□□□□□ -1.24
COL5A1-207ENST00000469093 LINC00242Q5T6M2 205 aa7.32□□□□□ -1.24
COL5A1-207ENST00000469093 C2orf82Q6UX34 121 aa7.32□□□□□ -1.24
COL5A1-207ENST00000469093 CHCHD1Q96BP2 118 aaKnown RBP7.32□□□□□ -1.24
COL5A1-207ENST00000469093 UBE2D1P51668 147 aa7.31□□□□□ -1.24
COL5A1-207ENST00000469093 UBE2BP63146 152 aa7.31□□□□□ -1.24
COL5A1-207ENST00000469093 C2orf66Q6UXQ4 117 aa7.31□□□□□ -1.24
COL5A1-207ENST00000469093 TRBV30A0A0K0K1B3 111 aa7.3□□□□□ -1.24
COL5A1-207ENST00000469093 LINC01546A6NGU7 62 aa7.3□□□□□ -1.24
COL5A1-207ENST00000469093 NDUFC2-KCTD14E9PQ53 114 aa7.3□□□□□ -1.24
COL5A1-207ENST00000469093 HBDP02042 147 aa7.3□□□□□ -1.24
COL5A1-207ENST00000469093 RPL13AP40429 203 aaKnown RBP7.3□□□□□ -1.24
COL5A1-207ENST00000469093 PAPPA-AS1Q5QFB9 102 aa7.3□□□□□ -1.24
COL5A1-207ENST00000469093 Q6ZN92 141 aa7.3□□□□□ -1.24
COL5A1-207ENST00000469093 PYGO1Q9Y3Y4 419 aa7.3□□□□□ -1.24
COL5A1-207ENST00000469093 HIST1H2BKO60814 126 aa7.29□□□□□ -1.24
COL5A1-207ENST00000469093 SERF1AO75920 110 aa7.29□□□□□ -1.24
COL5A1-207ENST00000469093 HIST1H2BJP06899 126 aa7.29□□□□□ -1.24
COL5A1-207ENST00000469093 HIST1H2BOP23527 126 aa7.29□□□□□ -1.24
COL5A1-207ENST00000469093 HIST1H2BBP33778 126 aa7.29□□□□□ -1.24
COL5A1-207ENST00000469093 HIST1H2BDP58876 126 aa7.29□□□□□ -1.24
COL5A1-207ENST00000469093 HIST1H2BCP62807 126 aa7.29□□□□□ -1.24
COL5A1-207ENST00000469093 HIST2H2BEQ16778 126 aa7.29□□□□□ -1.24
COL5A1-207ENST00000469093 HIST2H2BFQ5QNW6 126 aaPredicted RBP7.29□□□□□ -1.24
COL5A1-207ENST00000469093 HIST1H2BHQ93079 126 aa7.29□□□□□ -1.24
COL5A1-207ENST00000469093 SCGB3A1Q96QR1 104 aa7.29□□□□□ -1.24
COL5A1-207ENST00000469093 HIST1H2BNQ99877 126 aa7.29□□□□□ -1.24
COL5A1-207ENST00000469093 HIST1H2BMQ99879 126 aa7.29□□□□□ -1.24
COL5A1-207ENST00000469093 MUC2Q02817 5179 aa7.29□□□□□ -1.24
COL5A1-207ENST00000469093 IGLV4-3A0A075B6K6 122 aa7.28□□□□□ -1.24
COL5A1-207ENST00000469093 ZNF861PO60384 105 aa7.28□□□□□ -1.24
COL5A1-207ENST00000469093 TOMM6Q96B49 74 aa7.28□□□□□ -1.24
COL5A1-207ENST00000469093 TMEM141Q96I45 108 aa7.28□□□□□ -1.24
COL5A1-207ENST00000469093 PACRGQ96M98 296 aaPredicted RBP7.28□□□□□ -1.24
COL5A1-207ENST00000469093 C2orf88Q9BSF0 95 aa7.28□□□□□ -1.24
COL5A1-207ENST00000469093 ATP5LO75964 103 aa7.27□□□□□ -1.25
COL5A1-207ENST00000469093 NPSP0C0P6 89 aa7.27□□□□□ -1.25
COL5A1-207ENST00000469093 NDUFA6P56556 154 aa7.27□□□□□ -1.25
COL5A1-207ENST00000469093 LINC01561Q8N1V8 128 aa7.27□□□□□ -1.25
COL5A1-207ENST00000469093 S100A6P06703 90 aa7.26□□□□□ -1.25
COL5A1-207ENST00000469093 PMCHL1Q16048 86 aa7.26□□□□□ -1.25
COL5A1-207ENST00000469093 TEX43Q6ZNM6 134 aa7.26□□□□□ -1.25
COL5A1-207ENST00000469093 ERASQ7Z444 233 aa7.26□□□□□ -1.25
COL5A1-207ENST00000469093 URB1-AS1Q96HZ7 61 aa7.26□□□□□ -1.25
COL5A1-207ENST00000469093 TIMM17AQ99595 171 aa7.26□□□□□ -1.25
COL5A1-207ENST00000469093 VCX2Q9H322 139 aa7.26□□□□□ -1.25
COL5A1-207ENST00000469093 TSPAN13O95857 204 aa7.25□□□□□ -1.25
COL5A1-207ENST00000469093 ZC2HC1BQ5TFG8 222 aa7.25□□□□□ -1.25
COL5A1-207ENST00000469093 C22orf24Q9Y442 160 aa7.25□□□□□ -1.25
COL5A1-207ENST00000469093 FAM19A2Q8N3H0 131 aa7.24□□□□□ -1.25
COL5A1-207ENST00000469093 LINC00469Q8N7U9 141 aa7.24□□□□□ -1.25
COL5A1-207ENST00000469093 HSPB8Q9UJY1 196 aa7.24□□□□□ -1.25
COL5A1-207ENST00000469093 IGIPA6NJ69 53 aa7.23□□□□□ -1.25
COL5A1-207ENST00000469093 NUPR1O60356 82 aa7.23□□□□□ -1.25
COL5A1-207ENST00000469093 LEPROTL1O95214 131 aa7.23□□□□□ -1.25
COL5A1-207ENST00000469093 PRSS2P07478 247 aa7.23□□□□□ -1.25
COL5A1-207ENST00000469093 CKS1BP61024 79 aa7.23□□□□□ -1.25
COL5A1-207ENST00000469093 LBHQ53QV2 105 aaPredicted RBP7.23□□□□□ -1.25
COL5A1-207ENST00000469093 C6orf226Q5I0X4 101 aa7.23□□□□□ -1.25
COL5A1-207ENST00000469093 LINC00173Q6ZV60 143 aa7.23□□□□□ -1.25
COL5A1-207ENST00000469093 AMELXQ99217 191 aa7.23□□□□□ -1.25
COL5A1-207ENST00000469093 KRTAP9-2Q9BYQ4 174 aa7.23□□□□□ -1.25
COL5A1-207ENST00000469093 XAGE1AQ9HD64 81 aa7.23□□□□□ -1.25
COL5A1-207ENST00000469093 A0A087X002 238 aa7.22□□□□□ -1.25
COL5A1-207ENST00000469093 A0A0U1RQV1 116 aa7.22□□□□□ -1.25
COL5A1-207ENST00000469093 S100A2P29034 98 aa7.22□□□□□ -1.25
COL5A1-207ENST00000469093 PDZD11Q5EBL8 140 aa7.22□□□□□ -1.25
COL5A1-207ENST00000469093 COA6Q5JTJ3 125 aaKnown RBP7.22□□□□□ -1.25
COL5A1-207ENST00000469093 TOMM7Q9P0U1 55 aa7.22□□□□□ -1.25
COL5A1-207ENST00000469093 A0A096LNJ9 63 aa7.21□□□□□ -1.26
COL5A1-207ENST00000469093 FABP4P15090 132 aa7.21□□□□□ -1.26
COL5A1-207ENST00000469093 SEC11AP67812 179 aa7.21□□□□□ -1.26
COL5A1-207ENST00000469093 PMVKQ15126 192 aa7.21□□□□□ -1.26
COL5A1-207ENST00000469093 Q8IZM0 81 aa7.21□□□□□ -1.26
COL5A1-207ENST00000469093 IFI27L1Q96BM0 104 aa7.21□□□□□ -1.26
COL5A1-207ENST00000469093 LINC00310P59036 64 aa7.2□□□□□ -1.26
COL5A1-207ENST00000469093 FAM19A3Q7Z5A8 133 aa7.2□□□□□ -1.26
COL5A1-207ENST00000469093 MAP1LC3CQ9BXW4 147 aa7.2□□□□□ -1.26
COL5A1-207ENST00000469093 GEMIN7Q9H840 131 aaKnown RBP7.2□□□□□ -1.26
COL5A1-207ENST00000469093 BCE1O60756 84 aa7.19□□□□□ -1.26
COL5A1-207ENST00000469093 CRYGAP11844 174 aa7.19□□□□□ -1.26
COL5A1-207ENST00000469093 RPL28P46779 137 aaKnown RBP7.19□□□□□ -1.26
COL5A1-207ENST00000469093 LCE2AQ5TA79 106 aaPredicted RBP7.19□□□□□ -1.26
COL5A1-207ENST00000469093 MRPL55Q7Z7F7 128 aaKnown RBP7.19□□□□□ -1.26
COL5A1-207ENST00000469093 TYMSOSQ8TAI1 123 aa7.19□□□□□ -1.26
COL5A1-207ENST00000469093 TP73-AS1Q9UF72 201 aa7.19□□□□□ -1.26
COL5A1-207ENST00000469093 KRTAP9-6A0A140TA67 174 aa7.18□□□□□ -1.26
COL5A1-207ENST00000469093 H0Y8G0 127 aa7.18□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 53.9 ms