RNA–Protein interactions for RNA: ENST00000468565.1

COL27A1-203, Transcript of collagen type XXVII alpha 1 chain, humanhuman

TSL 2

Gene COL27A1, Length 1,946 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-203ENST00000468565 A0A0J9YXV3 536 aa9.74□□□□□ -0.85
COL27A1-203ENST00000468565 ZNF22P17026 224 aaPredicted RBP9.74□□□□□ -0.85
COL27A1-203ENST00000468565 RYR1P21817 5038 aa9.74□□□□□ -0.85
COL27A1-203ENST00000468565 A0A1B0GWB2 263 aa9.74□□□□□ -0.85
COL27A1-203ENST00000468565 Q9UF83 564 aa9.74□□□□□ -0.85
COL27A1-203ENST00000468565 TRBV10-1A0A0K0K1A3 114 aa9.73□□□□□ -0.85
COL27A1-203ENST00000468565 TSPEAR-AS2P59090 65 aa9.73□□□□□ -0.85
COL27A1-203ENST00000468565 KRTAP10-2P60368 255 aa9.73□□□□□ -0.85
COL27A1-203ENST00000468565 UBE2D4Q9Y2X8 147 aa9.73□□□□□ -0.85
COL27A1-203ENST00000468565 IBA57-AS1B1ANH7 110 aa9.72□□□□□ -0.85
COL27A1-203ENST00000468565 MRPS36P82909 103 aaKnown RBP9.72□□□□□ -0.85
COL27A1-203ENST00000468565 RPL36AP83881 106 aaKnown RBP9.72□□□□□ -0.85
COL27A1-203ENST00000468565 RPL36ALQ969Q0 106 aaKnown RBP9.72□□□□□ -0.85
COL27A1-203ENST00000468565 IGKV2D-29A0A075B6S2 120 aaPredicted RBP9.71□□□□□ -0.86
COL27A1-203ENST00000468565 IGKV2-29A2NJV5 120 aaPredicted RBP9.71□□□□□ -0.86
COL27A1-203ENST00000468565 CDK2AP2O75956 126 aa9.71□□□□□ -0.86
COL27A1-203ENST00000468565 FAM104AQ969W3 186 aa9.71□□□□□ -0.86
COL27A1-203ENST00000468565 ERG28Q9UKR5 140 aa9.71□□□□□ -0.86
COL27A1-203ENST00000468565 A0A087WTM6 91 aa9.7□□□□□ -0.86
COL27A1-203ENST00000468565 IGHV3-30P01768 117 aa9.7□□□□□ -0.86
COL27A1-203ENST00000468565 IGHV3-33P01772 117 aa9.7□□□□□ -0.86
COL27A1-203ENST00000468565 IGHV3-30-3P0DP02 117 aa9.7□□□□□ -0.86
COL27A1-203ENST00000468565 IGHV3-30-5P0DP03 117 aa9.7□□□□□ -0.86
COL27A1-203ENST00000468565 TIMM21Q9BVV7 248 aa9.7□□□□□ -0.86
COL27A1-203ENST00000468565 HSPG2P98160 4391 aa9.7□□□□□ -0.86
COL27A1-203ENST00000468565 TINCRA0A1B0GVN0 87 aa9.7□□□□□ -0.86
COL27A1-203ENST00000468565 GAGE6Q13070 117 aa9.7□□□□□ -0.86
COL27A1-203ENST00000468565 DAZ4Q86SG3 579 aaKnown RBP9.69□□□□□ -0.86
COL27A1-203ENST00000468565 DAZ3Q9NR90 486 aaKnown RBP9.69□□□□□ -0.86
COL27A1-203ENST00000468565 APOBP04114 4563 aaKnown RBP9.69□□□□□ -0.86
COL27A1-203ENST00000468565 UBE2D3P61077 147 aa9.68□□□□□ -0.86
COL27A1-203ENST00000468565 UBE2D2P62837 147 aa9.68□□□□□ -0.86
COL27A1-203ENST00000468565 DGAT2L7PQ6IED9 249 aa9.68□□□□□ -0.86
COL27A1-203ENST00000468565 Q6ZUT4 128 aa9.68□□□□□ -0.86
COL27A1-203ENST00000468565 IGHV3-64A0A075B6Q5 118 aa9.68□□□□□ -0.86
COL27A1-203ENST00000468565 UBE2D1P51668 147 aa9.68□□□□□ -0.86
COL27A1-203ENST00000468565 RNASE13Q5GAN3 156 aaKnown RBP9.68□□□□□ -0.86
COL27A1-203ENST00000468565 PSCAO43653 123 aa9.66□□□□□ -0.86
COL27A1-203ENST00000468565 Q9HAA7 133 aa9.66□□□□□ -0.86
COL27A1-203ENST00000468565 IGHV1-58A0A0C4DH39 117 aa9.66□□□□□ -0.86
COL27A1-203ENST00000468565 Q8N3U1 123 aa9.66□□□□□ -0.86
COL27A1-203ENST00000468565 TRAV8-3A0A0A6YYJ7 113 aa9.64□□□□□ -0.87
COL27A1-203ENST00000468565 LRCOL1A6NCL2 159 aa9.64□□□□□ -0.87
COL27A1-203ENST00000468565 SPINK8P0C7L1 97 aa9.64□□□□□ -0.87
COL27A1-203ENST00000468565 CSDC2Q9Y534 153 aaKnown RBP9.64□□□□□ -0.87
COL27A1-203ENST00000468565 APOMO95445 188 aa9.63□□□□□ -0.87
COL27A1-203ENST00000468565 ANAPC13Q9BS18 74 aa9.63□□□□□ -0.87
COL27A1-203ENST00000468565 TRBV6-8A0A0A6YYG3 113 aa9.62□□□□□ -0.87
COL27A1-203ENST00000468565 A0A0J9YXY3 114 aa9.62□□□□□ -0.87
COL27A1-203ENST00000468565 H3BMG7 143 aa9.62□□□□□ -0.87
COL27A1-203ENST00000468565 LYRM7Q5U5X0 104 aa9.62□□□□□ -0.87
COL27A1-203ENST00000468565 IGLV5-45A0A087WSX0 123 aa9.62□□□□□ -0.87
COL27A1-203ENST00000468565 TMEM262E9PQX1 116 aa9.62□□□□□ -0.87
COL27A1-203ENST00000468565 FUSP35637 526 aaKnown RBP eCLIP9.62□□□□□ -0.87
COL27A1-203ENST00000468565 HERVK_113P63121 156 aa9.62□□□□□ -0.87
COL27A1-203ENST00000468565 WFDC2Q14508 124 aa9.61□□□□□ -0.87
COL27A1-203ENST00000468565 NTM-AS1Q6ZSK4 140 aa9.61□□□□□ -0.87
COL27A1-203ENST00000468565 NTN5Q8WTR8 489 aaPredicted RBP9.61□□□□□ -0.87
COL27A1-203ENST00000468565 TMEM243Q9BU79 118 aa9.61□□□□□ -0.87
COL27A1-203ENST00000468565 NDUFA12Q9UI09 145 aa9.61□□□□□ -0.87
COL27A1-203ENST00000468565 UBE2L6O14933 153 aa9.6□□□□□ -0.87
COL27A1-203ENST00000468565 CFC1BP0CG36 223 aa9.6□□□□□ -0.87
COL27A1-203ENST00000468565 CFC1P0CG37 223 aa9.6□□□□□ -0.87
COL27A1-203ENST00000468565 Q8N814 137 aa9.6□□□□□ -0.87
COL27A1-203ENST00000468565 RMI2Q96E14 147 aa9.6□□□□□ -0.87
COL27A1-203ENST00000468565 H7C423 109 aa9.6□□□□□ -0.87
COL27A1-203ENST00000468565 FOXI1Q12951 378 aa9.6□□□□□ -0.87
COL27A1-203ENST00000468565 ETDBQ3ZM63 59 aa9.6□□□□□ -0.87
COL27A1-203ENST00000468565 FAM19A3Q7Z5A8 133 aa9.6□□□□□ -0.87
COL27A1-203ENST00000468565 TMEM101Q96IK0 257 aa9.6□□□□□ -0.87
COL27A1-203ENST00000468565 KRTAP17-1Q9BYP8 105 aa9.6□□□□□ -0.87
COL27A1-203ENST00000468565 PCLOQ9Y6V0 5065 aa9.59□□□□□ -0.87
COL27A1-203ENST00000468565 TRAV16A0A0A6YYK6 109 aaPredicted RBP9.59□□□□□ -0.87
COL27A1-203ENST00000468565 CDKN2A-AS1Q9UH64 79 aa9.59□□□□□ -0.87
COL27A1-203ENST00000468565 PRO1854Q9UHT4 67 aa9.59□□□□□ -0.87
COL27A1-203ENST00000468565 KLK12Q9UKR0 248 aa9.59□□□□□ -0.87
COL27A1-203ENST00000468565 A4D1N5 150 aa9.58□□□□□ -0.88
COL27A1-203ENST00000468565 MUSTN1Q8IVN3 82 aa9.58□□□□□ -0.88
COL27A1-203ENST00000468565 SS18L2Q9UHA2 77 aa9.58□□□□□ -0.88
COL27A1-203ENST00000468565 PRO0461Q9UI25 63 aa9.58□□□□□ -0.88
COL27A1-203ENST00000468565 IGLV5-52A0A0A0MRZ9 124 aa9.58□□□□□ -0.88
COL27A1-203ENST00000468565 A0A0B4J2C4 111 aa9.58□□□□□ -0.88
COL27A1-203ENST00000468565 LOC107984156A0A0G2JMH3 177 aa9.58□□□□□ -0.88
COL27A1-203ENST00000468565 LINC00242Q5T6M2 205 aa9.58□□□□□ -0.88
COL27A1-203ENST00000468565 ARL17AQ8IVW1 177 aa9.58□□□□□ -0.88
COL27A1-203ENST00000468565 SPANXDQ9BXN6 97 aa9.58□□□□□ -0.88
COL27A1-203ENST00000468565 CDIP1Q9H305 208 aa9.58□□□□□ -0.88
COL27A1-203ENST00000468565 SPANXCQ9NY87 97 aa9.58□□□□□ -0.88
COL27A1-203ENST00000468565 KRTAP10-1P60331 282 aa9.57□□□□□ -0.88
COL27A1-203ENST00000468565 CDC42SE2Q9NRR3 84 aa9.57□□□□□ -0.88
COL27A1-203ENST00000468565 TIMM17BO60830 172 aa9.56□□□□□ -0.88
COL27A1-203ENST00000468565 Q8N1X5 172 aa9.56□□□□□ -0.88
COL27A1-203ENST00000468565 PPDPFLQ8WWR9 84 aa9.56□□□□□ -0.88
COL27A1-203ENST00000468565 UBE2WQ96B02 151 aa9.56□□□□□ -0.88
COL27A1-203ENST00000468565 LITAFQ99732 161 aa9.56□□□□□ -0.88
COL27A1-203ENST00000468565 CHCHD5Q9BSY4 110 aa9.56□□□□□ -0.88
COL27A1-203ENST00000468565 NDUFA1O15239 70 aa9.56□□□□□ -0.88
COL27A1-203ENST00000468565 COX6A2Q02221 97 aa9.56□□□□□ -0.88
COL27A1-203ENST00000468565 KRTAP4-5Q9BYR2 181 aa9.56□□□□□ -0.88
COL27A1-203ENST00000468565 TRAV13-1A0A0B4J241 112 aa9.55□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms