RNA–Protein interactions for RNA: ENST00000468267.1

SSBP1-207, Transcript of single stranded DNA binding protein 1, humanhuman

TSL 2

Gene SSBP1, Length 800 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1-207ENST00000468267 SPINK6Q6UWN8 80 aa10.57□□□□□ -0.72
SSBP1-207ENST00000468267 CDKN2A-AS1Q9UH64 79 aa10.57□□□□□ -0.72
SSBP1-207ENST00000468267 PRSS2P07478 247 aa10.56□□□□□ -0.72
SSBP1-207ENST00000468267 GAGE2EQ4V326 116 aa10.56□□□□□ -0.72
SSBP1-207ENST00000468267 PHF5AQ7RTV0 110 aaKnown RBP10.56□□□□□ -0.72
SSBP1-207ENST00000468267 PACRGQ96M98 296 aaPredicted RBP10.56□□□□□ -0.72
SSBP1-207ENST00000468267 GEMIN7Q9H840 131 aaKnown RBP10.56□□□□□ -0.72
SSBP1-207ENST00000468267 GAGE2DQ9UEU5 116 aa10.56□□□□□ -0.72
SSBP1-207ENST00000468267 FAM168BA1KXE4 195 aa10.55□□□□□ -0.72
SSBP1-207ENST00000468267 C6orf226Q5I0X4 101 aa10.55□□□□□ -0.72
SSBP1-207ENST00000468267 FA2HQ7L5A8 372 aa10.55□□□□□ -0.72
SSBP1-207ENST00000468267 Q8IZM0 81 aa10.55□□□□□ -0.72
SSBP1-207ENST00000468267 TOMM7Q9P0U1 55 aa10.55□□□□□ -0.72
SSBP1-207ENST00000468267 PSORS1C2Q9UIG4 136 aa10.55□□□□□ -0.72
SSBP1-207ENST00000468267 NDUFC2-KCTD14E9PQ53 114 aa10.54□□□□□ -0.72
SSBP1-207ENST00000468267 CKS1BP61024 79 aa10.54□□□□□ -0.72
SSBP1-207ENST00000468267 LINC01600Q96MT4 127 aa10.54□□□□□ -0.72
SSBP1-207ENST00000468267 APOC3P02656 99 aa10.53□□□□□ -0.72
SSBP1-207ENST00000468267 CST9LQ9H4G1 147 aa10.53□□□□□ -0.72
SSBP1-207ENST00000468267 SMCO4Q9NRQ5 59 aa10.53□□□□□ -0.72
SSBP1-207ENST00000468267 TINCRA0A1B0GVN0 87 aa10.52□□□□□ -0.73
SSBP1-207ENST00000468267 REG3GQ6UW15 175 aa10.52□□□□□ -0.73
SSBP1-207ENST00000468267 TRAPPC1Q9Y5R8 145 aa10.52□□□□□ -0.73
SSBP1-207ENST00000468267 FAM19A5Q7Z5A7 132 aaPredicted RBP10.51□□□□□ -0.73
SSBP1-207ENST00000468267 KRTAP7-1Q8IUC3 87 aa10.51□□□□□ -0.73
SSBP1-207ENST00000468267 LINC00469Q8N7U9 141 aa10.51□□□□□ -0.73
SSBP1-207ENST00000468267 SNAPINO95295 136 aa10.5□□□□□ -0.73
SSBP1-207ENST00000468267 NDUFA5Q16718 116 aa10.5□□□□□ -0.73
SSBP1-207ENST00000468267 C1orf137Q5JT78 98 aa10.5□□□□□ -0.73
SSBP1-207ENST00000468267 C9orf129Q5T035 196 aaKnown RBP10.5□□□□□ -0.73
SSBP1-207ENST00000468267 SVBPQ8N300 66 aa10.5□□□□□ -0.73
SSBP1-207ENST00000468267 IGLV5-45A0A087WSX0 123 aa10.49□□□□□ -0.73
SSBP1-207ENST00000468267 PMVKQ15126 192 aa10.49□□□□□ -0.73
SSBP1-207ENST00000468267 C18orf32Q8TCD1 76 aa10.49□□□□□ -0.73
SSBP1-207ENST00000468267 SMIM1B2RUZ4 78 aa10.48□□□□□ -0.73
SSBP1-207ENST00000468267 F8VRH5 84 aa10.48□□□□□ -0.73
SSBP1-207ENST00000468267 PDZD11Q5EBL8 140 aa10.48□□□□□ -0.73
SSBP1-207ENST00000468267 KRTAP11-1Q8IUC1 163 aa10.48□□□□□ -0.73
SSBP1-207ENST00000468267 URB1-AS1Q96HZ7 61 aa10.48□□□□□ -0.73
SSBP1-207ENST00000468267 PLA2G2DQ9UNK4 145 aa10.48□□□□□ -0.73
SSBP1-207ENST00000468267 A0A096LNJ9 63 aa10.47□□□□□ -0.73
SSBP1-207ENST00000468267 LINC00614P0C842 121 aa10.47□□□□□ -0.73
SSBP1-207ENST00000468267 M0QXV9 152 aa10.46□□□□□ -0.73
SSBP1-207ENST00000468267 CXCL5P42830 114 aa10.46□□□□□ -0.73
SSBP1-207ENST00000468267 KRTAP10-8P60410 259 aa10.46□□□□□ -0.73
SSBP1-207ENST00000468267 COX7B2Q8TF08 81 aa10.46□□□□□ -0.73
SSBP1-207ENST00000468267 IGLV7-43P04211 117 aa10.45□□□□□ -0.74
SSBP1-207ENST00000468267 SPINK8P0C7L1 97 aa10.44□□□□□ -0.74
SSBP1-207ENST00000468267 HBDP02042 147 aa10.43□□□□□ -0.74
SSBP1-207ENST00000468267 RAB5BP61020 215 aa10.43□□□□□ -0.74
SSBP1-207ENST00000468267 XP32Q5T750 250 aa10.43□□□□□ -0.74
SSBP1-207ENST00000468267 YPEL4Q96NS1 127 aa10.43□□□□□ -0.74
SSBP1-207ENST00000468267 XAGE1AQ9HD64 81 aa10.43□□□□□ -0.74
SSBP1-207ENST00000468267 H3BRM9 83 aa10.42□□□□□ -0.74
SSBP1-207ENST00000468267 IGLC3P0DOY3 106 aa10.42□□□□□ -0.74
SSBP1-207ENST00000468267 NDUFA6P56556 154 aa10.42□□□□□ -0.74
SSBP1-207ENST00000468267 UBE2BP63146 152 aa10.42□□□□□ -0.74
SSBP1-207ENST00000468267 PMCHL1Q16048 86 aa10.41□□□□□ -0.74
SSBP1-207ENST00000468267 DIRC1Q969H9 104 aa10.41□□□□□ -0.74
SSBP1-207ENST00000468267 UBR4Q5T4S7 5183 aa10.4□□□□□ -0.74
SSBP1-207ENST00000468267 ODF1Q14990 250 aa10.4□□□□□ -0.74
SSBP1-207ENST00000468267 C22orf24Q9Y442 160 aa10.4□□□□□ -0.74
SSBP1-207ENST00000468267 ATP5LO75964 103 aa10.39□□□□□ -0.75
SSBP1-207ENST00000468267 IGLV5-39A0A0G2JS06 123 aa10.38□□□□□ -0.75
SSBP1-207ENST00000468267 LBHQ53QV2 105 aaPredicted RBP10.38□□□□□ -0.75
SSBP1-207ENST00000468267 H0Y9J4 135 aa10.37□□□□□ -0.75
SSBP1-207ENST00000468267 ZNF22P17026 224 aaPredicted RBP10.37□□□□□ -0.75
SSBP1-207ENST00000468267 TP73-AS1Q9UF72 201 aa10.37□□□□□ -0.75
SSBP1-207ENST00000468267 BAGE3Q86Y29 109 aa10.36□□□□□ -0.75
SSBP1-207ENST00000468267 CHCHD1Q96BP2 118 aaKnown RBP10.35□□□□□ -0.75
SSBP1-207ENST00000468267 C11orf86A6NJI1 115 aa10.34□□□□□ -0.75
SSBP1-207ENST00000468267 MRPL55Q7Z7F7 128 aaKnown RBP10.34□□□□□ -0.75
SSBP1-207ENST00000468267 CBLN2Q8IUK8 224 aa10.34□□□□□ -0.75
SSBP1-207ENST00000468267 NUPR1O60356 82 aa10.33□□□□□ -0.76
SSBP1-207ENST00000468267 LRP2P98164 4655 aa10.33□□□□□ -0.76
SSBP1-207ENST00000468267 TMEM170BQ5T4T1 132 aa10.31□□□□□ -0.76
SSBP1-207ENST00000468267 LINC00167Q96N53 147 aa10.31□□□□□ -0.76
SSBP1-207ENST00000468267 CHTOPQ9Y3Y2 248 aaKnown RBP10.31□□□□□ -0.76
SSBP1-207ENST00000468267 IGLV5-37A0A075B6J1 123 aa10.3□□□□□ -0.76
SSBP1-207ENST00000468267 ZNF861PO60384 105 aa10.3□□□□□ -0.76
SSBP1-207ENST00000468267 PRR26Q8N8Z3 221 aa10.3□□□□□ -0.76
SSBP1-207ENST00000468267 IFI27L1Q96BM0 104 aa10.3□□□□□ -0.76
SSBP1-207ENST00000468267 TRAV12-1A0A0B4J245 112 aa10.29□□□□□ -0.76
SSBP1-207ENST00000468267 KRTAP1-4P0C5Y4 121 aa10.29□□□□□ -0.76
SSBP1-207ENST00000468267 PFN2P35080 140 aa10.29□□□□□ -0.76
SSBP1-207ENST00000468267 RPL37AP8A6NKH3 93 aa10.28□□□□□ -0.76
SSBP1-207ENST00000468267 COX17Q14061 63 aa10.28□□□□□ -0.76
SSBP1-207ENST00000468267 SLC7A5P1Q8MH63 180 aa10.28□□□□□ -0.76
SSBP1-207ENST00000468267 ERG28Q9UKR5 140 aa10.28□□□□□ -0.76
SSBP1-207ENST00000468267 IGLV1-50A0A075B6I6 118 aa10.27□□□□□ -0.77
SSBP1-207ENST00000468267 BCE1O60756 84 aa10.27□□□□□ -0.77
SSBP1-207ENST00000468267 TRGC2P03986 189 aa10.27□□□□□ -0.77
SSBP1-207ENST00000468267 SFTA2Q6UW10 78 aa10.27□□□□□ -0.77
SSBP1-207ENST00000468267 NKAPP1Q8N9T2 125 aa10.27□□□□□ -0.77
SSBP1-207ENST00000468267 GAGE10A6NGK3 116 aa10.26□□□□□ -0.77
SSBP1-207ENST00000468267 HSBP1O75506 76 aa10.26□□□□□ -0.77
SSBP1-207ENST00000468267 FAM19A2Q8N3H0 131 aa10.26□□□□□ -0.77
SSBP1-207ENST00000468267 ZNF625Q96I27 306 aaPredicted RBP10.26□□□□□ -0.77
SSBP1-207ENST00000468267 SND1-IT1Q9HBX3 110 aa10.26□□□□□ -0.77
SSBP1-207ENST00000468267 TMEM223A0PJW6 202 aa10.25□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 55.2 ms