RNA–Protein interactions for RNA: ENST00000468143.1

CDHR3-205, Transcript of cadherin related family member 3, humanhuman

TSL 4

Gene CDHR3, Length 575 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDHR3-205ENST00000468143 LINC00469Q8N7U9 141 aa7.15□□□□□ -1.26
CDHR3-205ENST00000468143 CST9LQ9H4G1 147 aa7.15□□□□□ -1.26
CDHR3-205ENST00000468143 TRBV30A0A0K0K1B3 111 aa7.14□□□□□ -1.27
CDHR3-205ENST00000468143 LINC00614P0C842 121 aa7.14□□□□□ -1.27
CDHR3-205ENST00000468143 PMCHL1Q16048 86 aa7.14□□□□□ -1.27
CDHR3-205ENST00000468143 C18orf32Q8TCD1 76 aa7.14□□□□□ -1.27
CDHR3-205ENST00000468143 FAT3Q8TDW7 4589 aa7.14□□□□□ -1.27
CDHR3-205ENST00000468143 A0A096LNJ9 63 aa7.13□□□□□ -1.27
CDHR3-205ENST00000468143 TINCRA0A1B0GVN0 87 aa7.13□□□□□ -1.27
CDHR3-205ENST00000468143 LINC01549A6NIU2 74 aa7.13□□□□□ -1.27
CDHR3-205ENST00000468143 NDUFC2-KCTD14E9PQ53 114 aa7.13□□□□□ -1.27
CDHR3-205ENST00000468143 MT1HL1P0DM35 61 aa7.13□□□□□ -1.27
CDHR3-205ENST00000468143 NDUFA6P56556 154 aa7.13□□□□□ -1.27
CDHR3-205ENST00000468143 PMVKQ15126 192 aa7.13□□□□□ -1.27
CDHR3-205ENST00000468143 KRTAP7-1Q8IUC3 87 aa7.13□□□□□ -1.27
CDHR3-205ENST00000468143 Q8IZM0 81 aa7.13□□□□□ -1.27
CDHR3-205ENST00000468143 PSORS1C2Q9UIG4 136 aa7.13□□□□□ -1.27
CDHR3-205ENST00000468143 SMIM1B2RUZ4 78 aa7.12□□□□□ -1.27
CDHR3-205ENST00000468143 SRSF9Q13242 221 aaKnown RBP eCLIP7.12□□□□□ -1.27
CDHR3-205ENST00000468143 C9orf129Q5T035 196 aaKnown RBP7.12□□□□□ -1.27
CDHR3-205ENST00000468143 KRTAP11-1Q8IUC1 163 aa7.12□□□□□ -1.27
CDHR3-205ENST00000468143 PKHD1L1Q86WI1 4243 aa7.12□□□□□ -1.27
CDHR3-205ENST00000468143 SPINK8P0C7L1 97 aa7.11□□□□□ -1.27
CDHR3-205ENST00000468143 C1orf137Q5JT78 98 aa7.11□□□□□ -1.27
CDHR3-205ENST00000468143 SPINK6Q6UWN8 80 aa7.11□□□□□ -1.27
CDHR3-205ENST00000468143 YPEL4Q96NS1 127 aa7.11□□□□□ -1.27
CDHR3-205ENST00000468143 IGLV5-45A0A087WSX0 123 aa7.1□□□□□ -1.27
CDHR3-205ENST00000468143 F8VRH5 84 aa7.1□□□□□ -1.27
CDHR3-205ENST00000468143 HBDP02042 147 aa7.1□□□□□ -1.27
CDHR3-205ENST00000468143 PDZD11Q5EBL8 140 aa7.1□□□□□ -1.27
CDHR3-205ENST00000468143 SERTAD4-AS1Q5TG53 156 aa7.1□□□□□ -1.27
CDHR3-205ENST00000468143 CBLN2Q8IUK8 224 aa7.1□□□□□ -1.27
CDHR3-205ENST00000468143 SLC7A5P1Q8MH63 180 aa7.1□□□□□ -1.27
CDHR3-205ENST00000468143 COX7B2Q8TF08 81 aa7.1□□□□□ -1.27
CDHR3-205ENST00000468143 XAGE1AQ9HD64 81 aa7.1□□□□□ -1.27
CDHR3-205ENST00000468143 M0QXV9 152 aa7.09□□□□□ -1.27
CDHR3-205ENST00000468143 RAB5BP61020 215 aa7.08□□□□□ -1.28
CDHR3-205ENST00000468143 UBE2BP63146 152 aa7.08□□□□□ -1.28
CDHR3-205ENST00000468143 LINC01600Q96MT4 127 aa7.08□□□□□ -1.28
CDHR3-205ENST00000468143 H3BRM9 83 aa7.07□□□□□ -1.28
CDHR3-205ENST00000468143 IGLC3P0DOY3 106 aa7.07□□□□□ -1.28
CDHR3-205ENST00000468143 CXCL5P42830 114 aa7.07□□□□□ -1.28
CDHR3-205ENST00000468143 ODF1Q14990 250 aa7.07□□□□□ -1.28
CDHR3-205ENST00000468143 REG3GQ6UW15 175 aa7.07□□□□□ -1.28
CDHR3-205ENST00000468143 BAGE3Q86Y29 109 aa7.07□□□□□ -1.28
CDHR3-205ENST00000468143 IGLV7-43P04211 117 aa7.06□□□□□ -1.28
CDHR3-205ENST00000468143 ZNF22P17026 224 aaPredicted RBP7.06□□□□□ -1.28
CDHR3-205ENST00000468143 ATP5LO75964 103 aa7.05□□□□□ -1.28
CDHR3-205ENST00000468143 PLA2G2DQ9UNK4 145 aa7.05□□□□□ -1.28
CDHR3-205ENST00000468143 C22orf24Q9Y442 160 aa7.05□□□□□ -1.28
CDHR3-205ENST00000468143 C11orf86A6NJI1 115 aa7.04□□□□□ -1.28
CDHR3-205ENST00000468143 TRGC2P03986 189 aa7.03□□□□□ -1.28
CDHR3-205ENST00000468143 KRTAP10-8P60410 259 aa7.03□□□□□ -1.28
CDHR3-205ENST00000468143 TMEM170BQ5T4T1 132 aa7.03□□□□□ -1.28
CDHR3-205ENST00000468143 FAM19A2Q8N3H0 131 aa7.03□□□□□ -1.28
CDHR3-205ENST00000468143 CHCHD1Q96BP2 118 aaKnown RBP7.03□□□□□ -1.28
CDHR3-205ENST00000468143 CHTOPQ9Y3Y2 248 aaKnown RBP7.03□□□□□ -1.28
CDHR3-205ENST00000468143 IGLV5-39A0A0G2JS06 123 aa7.02□□□□□ -1.29
CDHR3-205ENST00000468143 PFN2P35080 140 aa7.02□□□□□ -1.29
CDHR3-205ENST00000468143 ZNF625Q96I27 306 aaPredicted RBP7.02□□□□□ -1.29
CDHR3-205ENST00000468143 HMCN2Q8NDA2 5059 aa7.02□□□□□ -1.29
CDHR3-205ENST00000468143 HSBP1O75506 76 aa7.01□□□□□ -1.29
CDHR3-205ENST00000468143 LBHQ53QV2 105 aaPredicted RBP7.01□□□□□ -1.29
CDHR3-205ENST00000468143 DIRC1Q969H9 104 aa7.01□□□□□ -1.29
CDHR3-205ENST00000468143 IFI27L1Q96BM0 104 aa7.01□□□□□ -1.29
CDHR3-205ENST00000468143 GAGE10A6NGK3 116 aa7□□□□□ -1.29
CDHR3-205ENST00000468143 RPL37AP8A6NKH3 93 aa7□□□□□ -1.29
CDHR3-205ENST00000468143 MRPL55Q7Z7F7 128 aaKnown RBP7□□□□□ -1.29
CDHR3-205ENST00000468143 UBR4Q5T4S7 5183 aa6.99□□□□□ -1.29
CDHR3-205ENST00000468143 H0Y8G0 127 aa6.99□□□□□ -1.29
CDHR3-205ENST00000468143 H0Y9J4 135 aa6.99□□□□□ -1.29
CDHR3-205ENST00000468143 LINC00167Q96N53 147 aa6.99□□□□□ -1.29
CDHR3-205ENST00000468143 TRAV12-1A0A0B4J245 112 aa6.98□□□□□ -1.29
CDHR3-205ENST00000468143 COLCA2A8K830 154 aa6.98□□□□□ -1.29
CDHR3-205ENST00000468143 SCO1O75880 301 aa6.98□□□□□ -1.29
CDHR3-205ENST00000468143 SERF1AO75920 110 aa6.98□□□□□ -1.29
CDHR3-205ENST00000468143 PRR26Q8N8Z3 221 aa6.98□□□□□ -1.29
CDHR3-205ENST00000468143 ERG28Q9UKR5 140 aa6.98□□□□□ -1.29
CDHR3-205ENST00000468143 TMEM223A0PJW6 202 aa6.97□□□□□ -1.29
CDHR3-205ENST00000468143 NUPR1O60356 82 aa6.97□□□□□ -1.29
CDHR3-205ENST00000468143 LINC00310P59036 64 aa6.97□□□□□ -1.29
CDHR3-205ENST00000468143 TP73-AS1Q9UF72 201 aa6.97□□□□□ -1.29
CDHR3-205ENST00000468143 A0A0U1RRA0 63 aa6.96□□□□□ -1.3
CDHR3-205ENST00000468143 ZNF861PO60384 105 aa6.96□□□□□ -1.3
CDHR3-205ENST00000468143 NKAPP1Q8N9T2 125 aa6.96□□□□□ -1.3
CDHR3-205ENST00000468143 SND1-IT1Q9HBX3 110 aa6.96□□□□□ -1.3
CDHR3-205ENST00000468143 LEPROTL1O95214 131 aa6.95□□□□□ -1.3
CDHR3-205ENST00000468143 FABP4P15090 132 aa6.95□□□□□ -1.3
CDHR3-205ENST00000468143 TNXBP22105 4242 aa6.94□□□□□ -1.3
CDHR3-205ENST00000468143 IGLV5-37A0A075B6J1 123 aa6.94□□□□□ -1.3
CDHR3-205ENST00000468143 IGKV2-28A0A075B6P5 120 aa6.94□□□□□ -1.3
CDHR3-205ENST00000468143 BCE1O60756 84 aa6.94□□□□□ -1.3
CDHR3-205ENST00000468143 IGKV2D-28P01615 120 aa6.94□□□□□ -1.3
CDHR3-205ENST00000468143 KRTAP1-4P0C5Y4 121 aa6.94□□□□□ -1.3
CDHR3-205ENST00000468143 LINC00158P58513 81 aa6.94□□□□□ -1.3
CDHR3-205ENST00000468143 COX17Q14061 63 aa6.94□□□□□ -1.3
CDHR3-205ENST00000468143 VPREB1P12018 145 aa6.93□□□□□ -1.3
CDHR3-205ENST00000468143 Q8NDZ9 215 aa6.93□□□□□ -1.3
CDHR3-205ENST00000468143 PMCHL2Q9BQD1 86 aa6.93□□□□□ -1.3
CDHR3-205ENST00000468143 SMIM13P0DJ93 91 aa6.91□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 75.7 ms