RNA–Protein interactions for RNA: ENST00000467563.3

CHRNA4-203, Transcript of cholinergic receptor nicotinic alpha 4 subunit, humanhuman

TSL 1 (best)

Gene CHRNA4, Length 2,098 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA4-203ENST00000467563 A4D1N5 150 aa12.61□□□□□ -0.39
CHRNA4-203ENST00000467563 C9orf118A6NHY6 69 aa12.61□□□□□ -0.39
CHRNA4-203ENST00000467563 EIF4EBP3O60516 100 aaPredicted RBP12.61□□□□□ -0.39
CHRNA4-203ENST00000467563 KRTAP26-1Q6PEX3 210 aa12.61□□□□□ -0.39
CHRNA4-203ENST00000467563 RPL24P83731 157 aaKnown RBP12.6□□□□□ -0.39
CHRNA4-203ENST00000467563 C2orf82Q6UX34 121 aa12.6□□□□□ -0.39
CHRNA4-203ENST00000467563 APOMO95445 188 aa12.6□□□□□ -0.39
CHRNA4-203ENST00000467563 CFC1BP0CG36 223 aa12.6□□□□□ -0.39
CHRNA4-203ENST00000467563 CFC1P0CG37 223 aa12.6□□□□□ -0.39
CHRNA4-203ENST00000467563 H3BUT2 72 aa12.59□□□□□ -0.39
CHRNA4-203ENST00000467563 UPK3BQ9BT76 320 aa12.58□□□□□ -0.39
CHRNA4-203ENST00000467563 APLNQ9ULZ1 77 aa12.58□□□□□ -0.39
CHRNA4-203ENST00000467563 LYSTQ99698 3801 aa12.58□□□□□ -0.4
CHRNA4-203ENST00000467563 KLK5Q9Y337 293 aaPredicted RBP12.58□□□□□ -0.4
CHRNA4-203ENST00000467563 SFTA2Q6UW10 78 aa12.57□□□□□ -0.4
CHRNA4-203ENST00000467563 IFITM1P13164 125 aa12.57□□□□□ -0.4
CHRNA4-203ENST00000467563 LINC00308Q8TCZ7 52 aa12.57□□□□□ -0.4
CHRNA4-203ENST00000467563 CKS1BP61024 79 aa12.56□□□□□ -0.4
CHRNA4-203ENST00000467563 CFAP161Q6P656 301 aa12.56□□□□□ -0.4
CHRNA4-203ENST00000467563 SOSTDC1Q6X4U4 206 aa12.56□□□□□ -0.4
CHRNA4-203ENST00000467563 DNAH7Q8WXX0 4024 aa12.55□□□□□ -0.4
CHRNA4-203ENST00000467563 IBA57-AS1B1ANH7 110 aa12.55□□□□□ -0.4
CHRNA4-203ENST00000467563 SPAG11BQ08648 103 aa12.55□□□□□ -0.4
CHRNA4-203ENST00000467563 C1orf43Q9BWL3 253 aa12.55□□□□□ -0.4
CHRNA4-203ENST00000467563 VAMP3Q15836 100 aa12.54□□□□□ -0.4
CHRNA4-203ENST00000467563 C6orf223Q8N319 242 aa12.54□□□□□ -0.4
CHRNA4-203ENST00000467563 LINC00526Q96FQ7 95 aa12.54□□□□□ -0.4
CHRNA4-203ENST00000467563 Q9HAA7 133 aa12.54□□□□□ -0.4
CHRNA4-203ENST00000467563 IGKV2D-24A0A075B6R9 120 aa12.53□□□□□ -0.4
CHRNA4-203ENST00000467563 PFN2P35080 140 aa12.53□□□□□ -0.4
CHRNA4-203ENST00000467563 CXCL5P42830 114 aa12.53□□□□□ -0.4
CHRNA4-203ENST00000467563 MIR7-3HGQ8N6C7 128 aa12.53□□□□□ -0.4
CHRNA4-203ENST00000467563 ERG28Q9UKR5 140 aa12.53□□□□□ -0.4
CHRNA4-203ENST00000467563 LINC00158P58513 81 aa12.53□□□□□ -0.4
CHRNA4-203ENST00000467563 PGPEP1Q9NXJ5 209 aa12.53□□□□□ -0.4
CHRNA4-203ENST00000467563 DNAH1Q9P2D7 4330 aa12.53□□□□□ -0.4
CHRNA4-203ENST00000467563 FBN3Q75N90 2809 aa12.53□□□□□ -0.4
CHRNA4-203ENST00000467563 TRAV16A0A0A6YYK6 109 aaPredicted RBP12.52□□□□□ -0.4
CHRNA4-203ENST00000467563 A0A0B4J2C4 111 aa12.52□□□□□ -0.4
CHRNA4-203ENST00000467563 A0A1W2PPM0 123 aa12.52□□□□□ -0.4
CHRNA4-203ENST00000467563 NUPR2A6NF83 97 aa12.52□□□□□ -0.41
CHRNA4-203ENST00000467563 PLECQ15149 4684 aaKnown RBP12.52□□□□□ -0.41
CHRNA4-203ENST00000467563 PRO1854Q9UHT4 67 aa12.52□□□□□ -0.41
CHRNA4-203ENST00000467563 TENM2Q9NT68 2774 aa12.51□□□□□ -0.41
CHRNA4-203ENST00000467563 TSPAN13O95857 204 aa12.5□□□□□ -0.41
CHRNA4-203ENST00000467563 C10orf25Q5T742 122 aa12.5□□□□□ -0.41
CHRNA4-203ENST00000467563 UNQ6190/PRO20217Q6UXQ8 127 aa12.5□□□□□ -0.41
CHRNA4-203ENST00000467563 C15orf56Q8N910 161 aa12.49□□□□□ -0.41
CHRNA4-203ENST00000467563 C9orf116Q5BN46 136 aaPredicted RBP12.49□□□□□ -0.41
CHRNA4-203ENST00000467563 COPS9Q8WXC6 57 aa12.49□□□□□ -0.41
CHRNA4-203ENST00000467563 STARD9Q9P2P6 4700 aa12.48□□□□□ -0.41
CHRNA4-203ENST00000467563 HIGD2BQ4VC39 106 aa12.48□□□□□ -0.41
CHRNA4-203ENST00000467563 NTN5Q8WTR8 489 aaPredicted RBP12.48□□□□□ -0.41
CHRNA4-203ENST00000467563 FABP2P12104 132 aa12.47□□□□□ -0.41
CHRNA4-203ENST00000467563 UBE2DNLQ8IWF7 75 aa12.47□□□□□ -0.41
CHRNA4-203ENST00000467563 PPDPFQ9H3Y8 114 aa12.47□□□□□ -0.41
CHRNA4-203ENST00000467563 UBE2V1Q13404 147 aa12.47□□□□□ -0.41
CHRNA4-203ENST00000467563 KRTAP1-5Q9BYS1 174 aa12.46□□□□□ -0.42
CHRNA4-203ENST00000467563 H7C2G1 150 aa12.44□□□□□ -0.42
CHRNA4-203ENST00000467563 ZNF561-AS1K7EIQ3 104 aa12.44□□□□□ -0.42
CHRNA4-203ENST00000467563 COX17Q14061 63 aa12.44□□□□□ -0.42
CHRNA4-203ENST00000467563 GAGE10A6NGK3 116 aa12.44□□□□□ -0.42
CHRNA4-203ENST00000467563 CASC10Q5T4H9 136 aa12.44□□□□□ -0.42
CHRNA4-203ENST00000467563 SPCS1Q9Y6A9 102 aa12.44□□□□□ -0.42
CHRNA4-203ENST00000467563 K7EP34 96 aa12.43□□□□□ -0.42
CHRNA4-203ENST00000467563 SND1-IT1Q9HBX3 110 aa12.42□□□□□ -0.42
CHRNA4-203ENST00000467563 C6orf48Q9UBA6 75 aa12.42□□□□□ -0.42
CHRNA4-203ENST00000467563 GVQW2A0A096LPI5 108 aaPredicted RBP12.41□□□□□ -0.42
CHRNA4-203ENST00000467563 RMI2Q96E14 147 aa12.41□□□□□ -0.42
CHRNA4-203ENST00000467563 GTF2H5Q6ZYL4 71 aa12.4□□□□□ -0.42
CHRNA4-203ENST00000467563 CAMK2N2Q96S95 79 aa12.4□□□□□ -0.42
CHRNA4-203ENST00000467563 LOC107984156A0A0G2JMH3 177 aa12.39□□□□□ -0.43
CHRNA4-203ENST00000467563 RPL13AP40429 203 aaKnown RBP12.39□□□□□ -0.43
CHRNA4-203ENST00000467563 ARL17AQ8IVW1 177 aa12.39□□□□□ -0.43
CHRNA4-203ENST00000467563 IGKV2-28A0A075B6P5 120 aa12.39□□□□□ -0.43
CHRNA4-203ENST00000467563 IGKV2D-28P01615 120 aa12.39□□□□□ -0.43
CHRNA4-203ENST00000467563 Q1RN00 199 aa12.39□□□□□ -0.43
CHRNA4-203ENST00000467563 C2orf48Q96LS8 159 aa12.39□□□□□ -0.43
CHRNA4-203ENST00000467563 Q6ZRU5 148 aa12.38□□□□□ -0.43
CHRNA4-203ENST00000467563 TRBV30A0A0K0K1B3 111 aa12.36□□□□□ -0.43
CHRNA4-203ENST00000467563 USP17L23D6RBM5 183 aa12.36□□□□□ -0.43
CHRNA4-203ENST00000467563 LINC00337Q8N6G1 96 aa12.36□□□□□ -0.43
CHRNA4-203ENST00000467563 TGP01266 2768 aa12.36□□□□□ -0.43
CHRNA4-203ENST00000467563 PSMB2P49721 201 aa12.36□□□□□ -0.43
CHRNA4-203ENST00000467563 DNAH10Q8IVF4 4471 aa12.35□□□□□ -0.43
CHRNA4-203ENST00000467563 TRIAP1O43715 76 aa12.34□□□□□ -0.43
CHRNA4-203ENST00000467563 VPS13DQ5THJ4 4388 aa12.34□□□□□ -0.43
CHRNA4-203ENST00000467563 LECT2O14960 151 aa12.33□□□□□ -0.44
CHRNA4-203ENST00000467563 MUC7Q8TAX7 377 aa12.33□□□□□ -0.44
CHRNA4-203ENST00000467563 H3BMG7 143 aa12.33□□□□□ -0.44
CHRNA4-203ENST00000467563 SCGB1C2P0DMR2 95 aa12.33□□□□□ -0.44
CHRNA4-203ENST00000467563 Q8NDZ9 215 aa12.33□□□□□ -0.44
CHRNA4-203ENST00000467563 TRAV13-2A0A0B4J235 113 aa12.32□□□□□ -0.44
CHRNA4-203ENST00000467563 F8WDY8 70 aa12.32□□□□□ -0.44
CHRNA4-203ENST00000467563 SYCNQ0VAF6 134 aa12.32□□□□□ -0.44
CHRNA4-203ENST00000467563 SLPIP03973 132 aa12.31□□□□□ -0.44
CHRNA4-203ENST00000467563 PRR3P79522 188 aaKnown RBP12.31□□□□□ -0.44
CHRNA4-203ENST00000467563 LYRM7Q5U5X0 104 aa12.31□□□□□ -0.44
CHRNA4-203ENST00000467563 NBDYA0A0U1RRE5 68 aa12.31□□□□□ -0.44
CHRNA4-203ENST00000467563 TCL1BO95988 128 aa12.31□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms