RNA–Protein interactions for RNA: ENST00000467558.5

BRAT1-203, Transcript of BRCA1 associated ATM activator 1, humanhuman

TSL 5

Gene BRAT1, Length 4,440 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRAT1-203ENST00000467558 TEX49A0A1B0GTD5 131 aa9.82□□□□□ -0.84
BRAT1-203ENST00000467558 TSPEAR-AS2P59090 65 aa9.81□□□□□ -0.84
BRAT1-203ENST00000467558 Q6ZTC4 211 aa9.81□□□□□ -0.84
BRAT1-203ENST00000467558 A0A1B0GUV1 79 aa9.81□□□□□ -0.84
BRAT1-203ENST00000467558 LINC01546A6NGU7 62 aa9.81□□□□□ -0.84
BRAT1-203ENST00000467558 COX6A2Q02221 97 aa9.8□□□□□ -0.84
BRAT1-203ENST00000467558 CYSRT1A8MQ03 144 aa9.8□□□□□ -0.84
BRAT1-203ENST00000467558 LINC00643Q86TS7 51 aa9.8□□□□□ -0.84
BRAT1-203ENST00000467558 LST1O00453 97 aa9.79□□□□□ -0.84
BRAT1-203ENST00000467558 HIGD2AQ9BW72 106 aa9.79□□□□□ -0.84
BRAT1-203ENST00000467558 TRAV23DV6A0A075B6W5 121 aa9.78□□□□□ -0.84
BRAT1-203ENST00000467558 FLNAP21333 2647 aaKnown RBP9.78□□□□□ -0.84
BRAT1-203ENST00000467558 IGLV2-33A0A075B6J2 118 aaPredicted RBP9.78□□□□□ -0.84
BRAT1-203ENST00000467558 SLPIP03973 132 aa9.78□□□□□ -0.84
BRAT1-203ENST00000467558 MUC4Q99102 2169 aa9.78□□□□□ -0.84
BRAT1-203ENST00000467558 M0R378 163 aa9.77□□□□□ -0.85
BRAT1-203ENST00000467558 B9D2Q9BPU9 175 aa9.77□□□□□ -0.85
BRAT1-203ENST00000467558 A0A096LNT2 108 aa9.77□□□□□ -0.85
BRAT1-203ENST00000467558 FAM236AA0A1B0GUQ0 79 aa9.76□□□□□ -0.85
BRAT1-203ENST00000467558 FAM236BA0A1B0GV22 79 aa9.76□□□□□ -0.85
BRAT1-203ENST00000467558 SMIM11BQ8TCY0 68 aa9.76□□□□□ -0.85
BRAT1-203ENST00000467558 ATOX1O00244 68 aa9.76□□□□□ -0.85
BRAT1-203ENST00000467558 UNQ6190/PRO20217Q6UXQ8 127 aa9.76□□□□□ -0.85
BRAT1-203ENST00000467558 ZZEF1O43149 2961 aa9.76□□□□□ -0.85
BRAT1-203ENST00000467558 FAM19A5Q7Z5A7 132 aaPredicted RBP9.75□□□□□ -0.85
BRAT1-203ENST00000467558 NDUFB1O75438 58 aa9.75□□□□□ -0.85
BRAT1-203ENST00000467558 CFAP47Q6ZTR5 3102 aa9.74□□□□□ -0.85
BRAT1-203ENST00000467558 ITPR3Q14573 2671 aa9.74□□□□□ -0.85
BRAT1-203ENST00000467558 EGFEM1PQ0D2K5 195 aa9.74□□□□□ -0.85
BRAT1-203ENST00000467558 FAM19A1Q7Z5A9 133 aa9.74□□□□□ -0.85
BRAT1-203ENST00000467558 A0A1B0GX51 115 aa9.73□□□□□ -0.85
BRAT1-203ENST00000467558 HELZ2Q9BYK8 2649 aaKnown RBP9.73□□□□□ -0.85
BRAT1-203ENST00000467558 ADAMTSL4-AS1Q5T5F5 129 aa9.73□□□□□ -0.85
BRAT1-203ENST00000467558 Q6ZQY7 126 aa9.72□□□□□ -0.85
BRAT1-203ENST00000467558 LYPD5Q6UWN5 251 aa9.72□□□□□ -0.85
BRAT1-203ENST00000467558 COL12A1Q99715 3063 aa9.72□□□□□ -0.85
BRAT1-203ENST00000467558 IGKV2-28A0A075B6P5 120 aa9.72□□□□□ -0.85
BRAT1-203ENST00000467558 IGKV2D-28P01615 120 aa9.72□□□□□ -0.85
BRAT1-203ENST00000467558 FLNCQ14315 2725 aa9.72□□□□□ -0.85
BRAT1-203ENST00000467558 USP24Q9UPU5 2620 aa9.72□□□□□ -0.85
BRAT1-203ENST00000467558 LOC107984640A0A0U1RRK4 108 aa9.72□□□□□ -0.85
BRAT1-203ENST00000467558 IGSF10Q6WRI0 2623 aa9.71□□□□□ -0.86
BRAT1-203ENST00000467558 NTM-AS1Q6ZSK4 140 aa9.7□□□□□ -0.86
BRAT1-203ENST00000467558 ZNF73O43830 326 aaPredicted RBP9.7□□□□□ -0.86
BRAT1-203ENST00000467558 LINC01561Q8N1V8 128 aa9.7□□□□□ -0.86
BRAT1-203ENST00000467558 C9orf116Q5BN46 136 aaPredicted RBP9.7□□□□□ -0.86
BRAT1-203ENST00000467558 KALRNO60229 2985 aa9.69□□□□□ -0.86
BRAT1-203ENST00000467558 B5MCH6 92 aa9.69□□□□□ -0.86
BRAT1-203ENST00000467558 NUPR2A6NF83 97 aa9.69□□□□□ -0.86
BRAT1-203ENST00000467558 RPL28P46779 137 aaKnown RBP9.69□□□□□ -0.86
BRAT1-203ENST00000467558 DHRS4-AS1Q9P1J3 65 aa9.68□□□□□ -0.86
BRAT1-203ENST00000467558 NDUFS5O43920 106 aa9.68□□□□□ -0.86
BRAT1-203ENST00000467558 WFDC10BQ8IUB3 73 aa9.68□□□□□ -0.86
BRAT1-203ENST00000467558 LRBAP50851 2863 aa9.68□□□□□ -0.86
BRAT1-203ENST00000467558 M0R2N4 97 aa9.68□□□□□ -0.86
BRAT1-203ENST00000467558 BPY2O14599 106 aa9.68□□□□□ -0.86
BRAT1-203ENST00000467558 MT-ATP8P03928 68 aa9.68□□□□□ -0.86
BRAT1-203ENST00000467558 CELA1Q9UNI1 258 aa9.68□□□□□ -0.86
BRAT1-203ENST00000467558 X6R8D5 127 aa9.67□□□□□ -0.86
BRAT1-203ENST00000467558 IGLV5-39A0A0G2JS06 123 aa9.67□□□□□ -0.86
BRAT1-203ENST00000467558 SMIM20Q8N5G0 67 aa9.66□□□□□ -0.86
BRAT1-203ENST00000467558 IGHV3OR16-9A0A0B4J2B5 98 aa9.66□□□□□ -0.86
BRAT1-203ENST00000467558 Q9UF83 564 aa9.66□□□□□ -0.86
BRAT1-203ENST00000467558 WDFY3Q8IZQ1 3526 aa9.66□□□□□ -0.86
BRAT1-203ENST00000467558 KRTAP24-1Q3LI83 254 aa9.66□□□□□ -0.86
BRAT1-203ENST00000467558 ATP5EP2Q5VTU8 51 aa9.66□□□□□ -0.86
BRAT1-203ENST00000467558 TACC2O95359 2948 aa9.65□□□□□ -0.86
BRAT1-203ENST00000467558 C4orf48Q5BLP8 95 aa9.65□□□□□ -0.86
BRAT1-203ENST00000467558 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP9.65□□□□□ -0.87
BRAT1-203ENST00000467558 CCKP06307 115 aa9.64□□□□□ -0.87
BRAT1-203ENST00000467558 F8WDY8 70 aa9.64□□□□□ -0.87
BRAT1-203ENST00000467558 NDUFC2O95298 119 aa9.64□□□□□ -0.87
BRAT1-203ENST00000467558 A8MTW9 85 aa9.64□□□□□ -0.87
BRAT1-203ENST00000467558 USP17L23D6RBM5 183 aa9.64□□□□□ -0.87
BRAT1-203ENST00000467558 C2orf48Q96LS8 159 aa9.64□□□□□ -0.87
BRAT1-203ENST00000467558 DMDP11532 3685 aa9.63□□□□□ -0.87
BRAT1-203ENST00000467558 A0A096LNI7 61 aa9.63□□□□□ -0.87
BRAT1-203ENST00000467558 LINC00474Q9P2X8 69 aa9.63□□□□□ -0.87
BRAT1-203ENST00000467558 RPL37AP8A6NKH3 93 aa9.63□□□□□ -0.87
BRAT1-203ENST00000467558 UPK3BQ9BT76 320 aa9.63□□□□□ -0.87
BRAT1-203ENST00000467558 NDUFC2-KCTD14E9PQ53 114 aa9.63□□□□□ -0.87
BRAT1-203ENST00000467558 MP68P56378 58 aa9.63□□□□□ -0.87
BRAT1-203ENST00000467558 WFDC9Q8NEX5 89 aa9.63□□□□□ -0.87
BRAT1-203ENST00000467558 ATRQ13535 2644 aa9.62□□□□□ -0.87
BRAT1-203ENST00000467558 TRBV10-3A0A0K0K1G6 114 aa9.62□□□□□ -0.87
BRAT1-203ENST00000467558 SDIM1Q6ZPB5 146 aa9.62□□□□□ -0.87
BRAT1-203ENST00000467558 PRR3P79522 188 aaKnown RBP9.62□□□□□ -0.87
BRAT1-203ENST00000467558 LY6G6CO95867 125 aa9.62□□□□□ -0.87
BRAT1-203ENST00000467558 IGLV5-45A0A087WSX0 123 aa9.62□□□□□ -0.87
BRAT1-203ENST00000467558 C6orf223Q8N319 242 aa9.62□□□□□ -0.87
BRAT1-203ENST00000467558 MGAM2Q2M2H8 2515 aa9.61□□□□□ -0.87
BRAT1-203ENST00000467558 H0Y9J4 135 aa9.59□□□□□ -0.87
BRAT1-203ENST00000467558 NDUFV3P56181 108 aaKnown RBP9.59□□□□□ -0.87
BRAT1-203ENST00000467558 H3BNG1 76 aa9.59□□□□□ -0.87
BRAT1-203ENST00000467558 Q8N814 137 aa9.59□□□□□ -0.87
BRAT1-203ENST00000467558 C7orf33Q8WU49 177 aa9.59□□□□□ -0.87
BRAT1-203ENST00000467558 NHLRC4P0CG21 123 aaPredicted RBP9.58□□□□□ -0.88
BRAT1-203ENST00000467558 IMUPQ9GZP8 106 aa9.57□□□□□ -0.88
BRAT1-203ENST00000467558 LINC01556Q5JQF7 62 aa9.57□□□□□ -0.88
BRAT1-203ENST00000467558 ENHOQ6UWT2 76 aa9.57□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 109.6 ms