RNA–Protein interactions for RNA: ENST00000467065.1

UBXN4-205, Transcript of UBX domain protein 4, humanhuman

TSL 5

Gene UBXN4, Length 334 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN4-205ENST00000467065 hDV102S1A0JD36 115 aa4.42□□□□□ -1.7
UBXN4-205ENST00000467065 F8VRH5 84 aa4.42□□□□□ -1.7
UBXN4-205ENST00000467065 SYS1-DBNDD2H3BUS1 97 aa4.42□□□□□ -1.7
UBXN4-205ENST00000467065 IGKCP01834 107 aa4.42□□□□□ -1.7
UBXN4-205ENST00000467065 GCSHP23434 173 aa4.42□□□□□ -1.7
UBXN4-205ENST00000467065 DDTP30046 118 aa4.42□□□□□ -1.7
UBXN4-205ENST00000467065 UBE2D1P51668 147 aa4.42□□□□□ -1.7
UBXN4-205ENST00000467065 C5orf38Q86SI9 138 aa4.42□□□□□ -1.7
UBXN4-205ENST00000467065 OR10D4PQ8NGN7 298 aa4.42□□□□□ -1.7
UBXN4-205ENST00000467065 AMELXQ99217 191 aa4.42□□□□□ -1.7
UBXN4-205ENST00000467065 TOMM7Q9P0U1 55 aa4.42□□□□□ -1.7
UBXN4-205ENST00000467065 A0A0J9YXV3 536 aa4.41□□□□□ -1.7
UBXN4-205ENST00000467065 F8WDY8 70 aa4.41□□□□□ -1.7
UBXN4-205ENST00000467065 CDK2AP2O75956 126 aa4.41□□□□□ -1.7
UBXN4-205ENST00000467065 CIRBPQ14011 172 aaKnown RBP4.41□□□□□ -1.7
UBXN4-205ENST00000467065 LINC01561Q8N1V8 128 aa4.41□□□□□ -1.7
UBXN4-205ENST00000467065 MAPKAPK5-AS1Q8N8E1 139 aa4.41□□□□□ -1.7
UBXN4-205ENST00000467065 URB1-AS1Q96HZ7 61 aa4.41□□□□□ -1.7
UBXN4-205ENST00000467065 C14orf144Q96I85 54 aa4.41□□□□□ -1.7
UBXN4-205ENST00000467065 CHAC1Q9BUX1 264 aa4.41□□□□□ -1.7
UBXN4-205ENST00000467065 A0A087WZ39 114 aa4.4□□□□□ -1.71
UBXN4-205ENST00000467065 NUPR1O60356 82 aa4.4□□□□□ -1.71
UBXN4-205ENST00000467065 LGALS3P17931 250 aaKnown RBP4.4□□□□□ -1.71
UBXN4-205ENST00000467065 LINC00242Q5T6M2 205 aa4.4□□□□□ -1.71
UBXN4-205ENST00000467065 ORAOV1Q8WV07 137 aa4.4□□□□□ -1.71
UBXN4-205ENST00000467065 CAMK2N2Q96S95 79 aa4.4□□□□□ -1.71
UBXN4-205ENST00000467065 KRTAP9-8Q9BYQ0 159 aa4.4□□□□□ -1.71
UBXN4-205ENST00000467065 A0A087WTM6 91 aa4.39□□□□□ -1.71
UBXN4-205ENST00000467065 USP17L23D6RBM5 183 aa4.39□□□□□ -1.71
UBXN4-205ENST00000467065 NDUFA1O15239 70 aa4.39□□□□□ -1.71
UBXN4-205ENST00000467065 C3orf79P0CE67 100 aa4.39□□□□□ -1.71
UBXN4-205ENST00000467065 IGLC3P0DOY3 106 aa4.39□□□□□ -1.71
UBXN4-205ENST00000467065 CXCL5P42830 114 aa4.39□□□□□ -1.71
UBXN4-205ENST00000467065 ZC2HC1BQ5TFG8 222 aa4.39□□□□□ -1.71
UBXN4-205ENST00000467065 NTN5Q8WTR8 489 aaPredicted RBP4.39□□□□□ -1.71
UBXN4-205ENST00000467065 PLEKHB2Q96CS7 222 aa4.39□□□□□ -1.71
UBXN4-205ENST00000467065 MRPL35Q9NZE8 188 aaKnown RBP4.39□□□□□ -1.71
UBXN4-205ENST00000467065 IGHV3-64A0A075B6Q5 118 aa4.38□□□□□ -1.71
UBXN4-205ENST00000467065 A0A096LNJ9 63 aa4.38□□□□□ -1.71
UBXN4-205ENST00000467065 IGLV5-52A0A0A0MRZ9 124 aa4.38□□□□□ -1.71
UBXN4-205ENST00000467065 MYMXA0A1B0GTQ4 84 aa4.38□□□□□ -1.71
UBXN4-205ENST00000467065 C11orf86A6NJI1 115 aa4.38□□□□□ -1.71
UBXN4-205ENST00000467065 LECT2O14960 151 aa4.38□□□□□ -1.71
UBXN4-205ENST00000467065 SPINK8P0C7L1 97 aa4.38□□□□□ -1.71
UBXN4-205ENST00000467065 SPAG11BQ08648 103 aa4.38□□□□□ -1.71
UBXN4-205ENST00000467065 FOXI1Q12951 378 aa4.38□□□□□ -1.71
UBXN4-205ENST00000467065 FAM19A3Q7Z5A8 133 aa4.38□□□□□ -1.71
UBXN4-205ENST00000467065 COX7B2Q8TF08 81 aa4.38□□□□□ -1.71
UBXN4-205ENST00000467065 COPS9Q8WXC6 57 aa4.38□□□□□ -1.71
UBXN4-205ENST00000467065 CDKN2A-AS1Q9UH64 79 aa4.38□□□□□ -1.71
UBXN4-205ENST00000467065 IGLV4-69A0A075B6H9 119 aa4.37□□□□□ -1.71
UBXN4-205ENST00000467065 IGLV2-33A0A075B6J2 118 aaPredicted RBP4.37□□□□□ -1.71
UBXN4-205ENST00000467065 IGHV3OR16-9A0A0B4J2B5 98 aa4.37□□□□□ -1.71
UBXN4-205ENST00000467065 NMUP48645 174 aa4.37□□□□□ -1.71
UBXN4-205ENST00000467065 HERV-K104P63124 156 aa4.37□□□□□ -1.71
UBXN4-205ENST00000467065 SYCNQ0VAF6 134 aa4.37□□□□□ -1.71
UBXN4-205ENST00000467065 ODF1Q14990 250 aa4.37□□□□□ -1.71
UBXN4-205ENST00000467065 HIGD2BQ4VC39 106 aa4.37□□□□□ -1.71
UBXN4-205ENST00000467065 LINC01545Q5VT33 79 aa4.37□□□□□ -1.71
UBXN4-205ENST00000467065 LINC00173Q6ZV60 143 aa4.37□□□□□ -1.71
UBXN4-205ENST00000467065 Q8IZM0 81 aa4.37□□□□□ -1.71
UBXN4-205ENST00000467065 Q8N814 137 aa4.37□□□□□ -1.71
UBXN4-205ENST00000467065 C2orf48Q96LS8 159 aa4.37□□□□□ -1.71
UBXN4-205ENST00000467065 PMCHL2Q9BQD1 86 aa4.37□□□□□ -1.71
UBXN4-205ENST00000467065 LINC00474Q9P2X8 69 aa4.37□□□□□ -1.71
UBXN4-205ENST00000467065 M0R143 59 aa4.36□□□□□ -1.71
UBXN4-205ENST00000467065 KRTAP10-1P60331 282 aa4.36□□□□□ -1.71
UBXN4-205ENST00000467065 COX6A2Q02221 97 aa4.36□□□□□ -1.71
UBXN4-205ENST00000467065 MEIG1Q5JSS6 88 aa4.36□□□□□ -1.71
UBXN4-205ENST00000467065 SCGB1D4Q6XE38 83 aa4.36□□□□□ -1.71
UBXN4-205ENST00000467065 Q8N1X5 172 aa4.36□□□□□ -1.71
UBXN4-205ENST00000467065 CARD19Q96LW7 228 aa4.36□□□□□ -1.71
UBXN4-205ENST00000467065 MIEN1Q9BRT3 115 aa4.36□□□□□ -1.71
UBXN4-205ENST00000467065 VAMP8Q9BV40 100 aa4.36□□□□□ -1.71
UBXN4-205ENST00000467065 FAT1Q14517 4588 aa4.35□□□□□ -1.71
UBXN4-205ENST00000467065 GVQW2A0A096LPI5 108 aaPredicted RBP4.35□□□□□ -1.71
UBXN4-205ENST00000467065 LRCOL1A6NCL2 159 aa4.35□□□□□ -1.71
UBXN4-205ENST00000467065 J3QQQ9 107 aa4.35□□□□□ -1.71
UBXN4-205ENST00000467065 LEPROTO15243 131 aa4.35□□□□□ -1.71
UBXN4-205ENST00000467065 ZNF22P17026 224 aaPredicted RBP4.35□□□□□ -1.71
UBXN4-205ENST00000467065 LINC00158P58513 81 aa4.35□□□□□ -1.71
UBXN4-205ENST00000467065 LINC00310P59036 64 aa4.35□□□□□ -1.71
UBXN4-205ENST00000467065 HAMPP81172 84 aa4.35□□□□□ -1.71
UBXN4-205ENST00000467065 IGLV5-45A0A087WSX0 123 aa4.34□□□□□ -1.71
UBXN4-205ENST00000467065 TRBV30A0A0K0K1B3 111 aa4.34□□□□□ -1.71
UBXN4-205ENST00000467065 LOC107984640A0A0U1RRK4 108 aa4.34□□□□□ -1.71
UBXN4-205ENST00000467065 TMEM223A0PJW6 202 aa4.34□□□□□ -1.71
UBXN4-205ENST00000467065 XGP55808 180 aa4.34□□□□□ -1.71
UBXN4-205ENST00000467065 COX17Q14061 63 aa4.34□□□□□ -1.71
UBXN4-205ENST00000467065 WFDC2Q14508 124 aa4.34□□□□□ -1.71
UBXN4-205ENST00000467065 RNF151Q2KHN1 245 aa4.34□□□□□ -1.71
UBXN4-205ENST00000467065 ATOH7Q8N100 152 aa4.34□□□□□ -1.71
UBXN4-205ENST00000467065 NDUFA12Q9UI09 145 aa4.34□□□□□ -1.71
UBXN4-205ENST00000467065 VPS13BQ7Z7G8 4022 aa4.34□□□□□ -1.71
UBXN4-205ENST00000467065 DNAH8Q96JB1 4490 aa4.33□□□□□ -1.72
UBXN4-205ENST00000467065 SMIM1B2RUZ4 78 aa4.33□□□□□ -1.72
UBXN4-205ENST00000467065 E9PLD3 99 aa4.33□□□□□ -1.72
UBXN4-205ENST00000467065 PFN2P35080 140 aa4.33□□□□□ -1.72
UBXN4-205ENST00000467065 RPL18AQ02543 176 aaKnown RBP4.33□□□□□ -1.72
UBXN4-205ENST00000467065 SRSF9Q13242 221 aaKnown RBP eCLIP4.33□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 54.9 ms