RNA–Protein interactions for RNA: ENST00000466854.5

CCDC58-203, Transcript of coiled-coil domain containing 58, humanhuman

TSL 3

Gene CCDC58, Length 769 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC58-203ENST00000466854 ZCCHC23Q6ZST2 131 aa2.04□□□□□ -2.08
CCDC58-203ENST00000466854 OR8B3Q8NGG8 313 aa2.04□□□□□ -2.08
CCDC58-203ENST00000466854 C18orf32Q8TCD1 76 aa2.04□□□□□ -2.08
CCDC58-203ENST00000466854 DOCK10Q96BY6 2186 aa2.04□□□□□ -2.08
CCDC58-203ENST00000466854 MUCL1Q96DR8 90 aa2.04□□□□□ -2.08
CCDC58-203ENST00000466854 HIGD1BQ9P298 99 aa2.04□□□□□ -2.08
CCDC58-203ENST00000466854 TRAPPC1Q9Y5R8 145 aa2.04□□□□□ -2.08
CCDC58-203ENST00000466854 ANK3Q12955 4377 aaKnown RBP2.04□□□□□ -2.08
CCDC58-203ENST00000466854 USF3Q68DE3 2245 aa2.03□□□□□ -2.08
CCDC58-203ENST00000466854 A0A1B0GU33 70 aa2.03□□□□□ -2.08
CCDC58-203ENST00000466854 H3BPC8 53 aa2.03□□□□□ -2.08
CCDC58-203ENST00000466854 H3BUT2 72 aa2.03□□□□□ -2.08
CCDC58-203ENST00000466854 H7C2G1 150 aa2.03□□□□□ -2.08
CCDC58-203ENST00000466854 SIX6O95475 246 aa2.03□□□□□ -2.08
CCDC58-203ENST00000466854 CRPP02741 224 aa2.03□□□□□ -2.08
CCDC58-203ENST00000466854 HMGA1P17096 107 aaKnown RBP2.03□□□□□ -2.08
CCDC58-203ENST00000466854 MPV17P39210 176 aa2.03□□□□□ -2.08
CCDC58-203ENST00000466854 UBE2SQ16763 222 aa2.03□□□□□ -2.08
CCDC58-203ENST00000466854 DEFB116Q30KQ4 102 aa2.03□□□□□ -2.08
CCDC58-203ENST00000466854 S100A7L2Q5SY68 101 aa2.03□□□□□ -2.08
CCDC58-203ENST00000466854 CFAP126Q5VTH2 177 aa2.03□□□□□ -2.08
CCDC58-203ENST00000466854 DYNLRB2Q8TF09 96 aa2.03□□□□□ -2.08
CCDC58-203ENST00000466854 TMEM141Q96I45 108 aa2.03□□□□□ -2.08
CCDC58-203ENST00000466854 TRGV9Q99603 122 aa2.03□□□□□ -2.08
CCDC58-203ENST00000466854 SCRT1Q9BWW7 348 aa2.03□□□□□ -2.08
CCDC58-203ENST00000466854 A0A087WWC5 75 aa2.02□□□□□ -2.09
CCDC58-203ENST00000466854 C7orf77A4D0Y5 90 aa2.02□□□□□ -2.09
CCDC58-203ENST00000466854 LRCOL1A6NCL2 159 aa2.02□□□□□ -2.09
CCDC58-203ENST00000466854 C11orf86A6NJI1 115 aa2.02□□□□□ -2.09
CCDC58-203ENST00000466854 C10orf142B7Z368 130 aa2.02□□□□□ -2.09
CCDC58-203ENST00000466854 C17orf112F2Z3M2 114 aa2.02□□□□□ -2.09
CCDC58-203ENST00000466854 IGHV3-53P01767 116 aa2.02□□□□□ -2.09
CCDC58-203ENST00000466854 PIPP12273 146 aaPredicted RBP2.02□□□□□ -2.09
CCDC58-203ENST00000466854 LINC00483Q53H64 154 aa2.02□□□□□ -2.09
CCDC58-203ENST00000466854 KRTAP26-1Q6PEX3 210 aa2.02□□□□□ -2.09
CCDC58-203ENST00000466854 ZNF826PQ6ZT77 177 aa2.02□□□□□ -2.09
CCDC58-203ENST00000466854 HMGN2P46Q86SG4 172 aa2.02□□□□□ -2.09
CCDC58-203ENST00000466854 CYB561D1Q8N8Q1 229 aa2.02□□□□□ -2.09
CCDC58-203ENST00000466854 NHP2Q9NX24 153 aaKnown RBP2.02□□□□□ -2.09
CCDC58-203ENST00000466854 VWFP04275 2813 aa2.02□□□□□ -2.09
CCDC58-203ENST00000466854 EPPK1P58107 5090 aaKnown RBP2.01□□□□□ -2.09
CCDC58-203ENST00000466854 ABCA1O95477 2261 aa2.01□□□□□ -2.09
CCDC58-203ENST00000466854 IGLV2-18A0A075B6J9 118 aa2.01□□□□□ -2.09
CCDC58-203ENST00000466854 IGKV3D-11A0A0A0MRZ8 115 aa2.01□□□□□ -2.09
CCDC58-203ENST00000466854 IGHV1-18A0A0C4DH31 117 aa2.01□□□□□ -2.09
CCDC58-203ENST00000466854 TCRBV4S1A1TA0A5B7 111 aa2.01□□□□□ -2.09
CCDC58-203ENST00000466854 RNASE2P10153 161 aaKnown RBP2.01□□□□□ -2.09
CCDC58-203ENST00000466854 DSCR4P56555 118 aaPredicted RBP2.01□□□□□ -2.09
CCDC58-203ENST00000466854 UBE2G1P62253 170 aa2.01□□□□□ -2.09
CCDC58-203ENST00000466854 MPV17LQ2QL34 196 aa2.01□□□□□ -2.09
CCDC58-203ENST00000466854 ZNF791Q3KP31 576 aaPredicted RBP2.01□□□□□ -2.09
CCDC58-203ENST00000466854 SLC48A1Q6P1K1 146 aa2.01□□□□□ -2.09
CCDC58-203ENST00000466854 LYPD6Q86Y78 171 aa2.01□□□□□ -2.09
CCDC58-203ENST00000466854 ST20-AS1Q8NBB2 130 aa2.01□□□□□ -2.09
CCDC58-203ENST00000466854 MGST2Q99735 147 aa2.01□□□□□ -2.09
CCDC58-203ENST00000466854 CMYA5Q8N3K9 4069 aa2.01□□□□□ -2.09
CCDC58-203ENST00000466854 SEC16AO15027 2179 aa2□□□□□ -2.09
CCDC58-203ENST00000466854 A0A087WXM4 84 aa2□□□□□ -2.09
CCDC58-203ENST00000466854 TRAV2A0A0B4J234 112 aa2□□□□□ -2.09
CCDC58-203ENST00000466854 TRAV13-2A0A0B4J235 113 aa2□□□□□ -2.09
CCDC58-203ENST00000466854 LOC107984156A0A0G2JMH3 177 aa2□□□□□ -2.09
CCDC58-203ENST00000466854 ODF3BA8MYP8 253 aa2□□□□□ -2.09
CCDC58-203ENST00000466854 E7EUB6 86 aa2□□□□□ -2.09
CCDC58-203ENST00000466854 IL4P05112 153 aa2□□□□□ -2.09
CCDC58-203ENST00000466854 ASAH2BP0C7U1 165 aa2□□□□□ -2.09
CCDC58-203ENST00000466854 CXCL8P10145 99 aa2□□□□□ -2.09
CCDC58-203ENST00000466854 ELOBQ15370 118 aa2□□□□□ -2.09
CCDC58-203ENST00000466854 DEFB113Q30KQ7 82 aa2□□□□□ -2.09
CCDC58-203ENST00000466854 C9orf116Q5BN46 136 aaPredicted RBP2□□□□□ -2.09
CCDC58-203ENST00000466854 TMEM136Q6ZRR5 245 aa2□□□□□ -2.09
CCDC58-203ENST00000466854 ARL17AQ8IVW1 177 aa2□□□□□ -2.09
CCDC58-203ENST00000466854 SMIM7Q9BQ49 75 aa2□□□□□ -2.09
CCDC58-203ENST00000466854 C14orf132Q9NPU4 83 aa2□□□□□ -2.09
CCDC58-203ENST00000466854 PRR14LQ5THK1 2151 aa1.99□□□□□ -2.09
CCDC58-203ENST00000466854 IGLV10-54A0A075B6I4 117 aa1.99□□□□□ -2.09
CCDC58-203ENST00000466854 CXorf51AA0A1B0GTR3 108 aa1.99□□□□□ -2.09
CCDC58-203ENST00000466854 NAP1L6A6NFF2 107 aa1.99□□□□□ -2.09
CCDC58-203ENST00000466854 MIFP14174 115 aa1.99□□□□□ -2.09
CCDC58-203ENST00000466854 KRTDAPP60985 99 aa1.99□□□□□ -2.09
CCDC58-203ENST00000466854 UBE2D3P61077 147 aa1.99□□□□□ -2.09
CCDC58-203ENST00000466854 GNG11P61952 73 aa1.99□□□□□ -2.09
CCDC58-203ENST00000466854 UBE2D2P62837 147 aa1.99□□□□□ -2.09
CCDC58-203ENST00000466854 KLKP1Q107X0 134 aa1.99□□□□□ -2.09
CCDC58-203ENST00000466854 DEFB133Q30KQ1 61 aa1.99□□□□□ -2.09
CCDC58-203ENST00000466854 Q5VV11 94 aa1.99□□□□□ -2.09
CCDC58-203ENST00000466854 VMO1Q7Z5L0 202 aa1.99□□□□□ -2.09
CCDC58-203ENST00000466854 Q8TAT8 98 aa1.99□□□□□ -2.09
CCDC58-203ENST00000466854 UBALD1Q8TB05 177 aa1.99□□□□□ -2.09
CCDC58-203ENST00000466854 KLF14Q8TD94 323 aaPredicted RBP1.99□□□□□ -2.09
CCDC58-203ENST00000466854 BPESC1Q9GZL8 116 aa1.99□□□□□ -2.09
CCDC58-203ENST00000466854 NXT2Q9NPJ8 142 aaKnown RBP1.99□□□□□ -2.09
CCDC58-203ENST00000466854 CDC42SE1Q9NRR8 79 aa1.99□□□□□ -2.09
CCDC58-203ENST00000466854 TIMM9Q9Y5J7 89 aa1.99□□□□□ -2.09
CCDC58-203ENST00000466854 MINOS1-NBL1R4GNA1 71 aa1.99□□□□□ -2.09
CCDC58-203ENST00000466854 S4R3C0 116 aa1.99□□□□□ -2.09
CCDC58-203ENST00000466854 TENM3Q9P273 2699 aa1.99□□□□□ -2.09
CCDC58-203ENST00000466854 TRBV7-1A0A0A6YYK4 115 aa1.98□□□□□ -2.09
CCDC58-203ENST00000466854 TRBV10-3A0A0K0K1G6 114 aa1.98□□□□□ -2.09
CCDC58-203ENST00000466854 A0A1W2PNM2 257 aa1.98□□□□□ -2.09
CCDC58-203ENST00000466854 HCG22E2RYF7 251 aa1.98□□□□□ -2.09
Retrieved 100 of 20,778 RNA–protein pairs in 98.8 ms