RNA–Protein interactions for RNA: ENST00000466213.5

SFPQ-203, Transcript of splicing factor proline and glutamine rich, humanhuman

TSL 1 (best)

Gene SFPQ, Length 1,431 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFPQ-203ENST00000466213 GRIFINA4D1Z8 144 aa4.29□□□□□ -1.72
SFPQ-203ENST00000466213 GIG44P09565 113 aaPredicted RBP4.29□□□□□ -1.72
SFPQ-203ENST00000466213 SPART-AS1P0CW21 52 aa4.29□□□□□ -1.72
SFPQ-203ENST00000466213 ELOBQ15370 118 aa4.29□□□□□ -1.72
SFPQ-203ENST00000466213 C9orf153Q5TBE3 101 aa4.29□□□□□ -1.72
SFPQ-203ENST00000466213 SPANXN1Q5VSR9 72 aa4.29□□□□□ -1.72
SFPQ-203ENST00000466213 ZNF705AQ6ZN79 300 aaPredicted RBP4.29□□□□□ -1.72
SFPQ-203ENST00000466213 CHCHD7Q9BUK0 85 aa4.29□□□□□ -1.72
SFPQ-203ENST00000466213 OSTCQ9NRP0 149 aa4.29□□□□□ -1.72
SFPQ-203ENST00000466213 U3KQK5 164 aa4.29□□□□□ -1.72
SFPQ-203ENST00000466213 IGLV7-46A0A075B6I9 117 aa4.28□□□□□ -1.72
SFPQ-203ENST00000466213 TRGV2A0A075B6R0 118 aa4.28□□□□□ -1.72
SFPQ-203ENST00000466213 A0A087WYN8 130 aa4.28□□□□□ -1.72
SFPQ-203ENST00000466213 TRGV1A0A0A0MS02 117 aa4.28□□□□□ -1.72
SFPQ-203ENST00000466213 F2Z2F3 143 aa4.28□□□□□ -1.72
SFPQ-203ENST00000466213 GNRH2O43555 120 aa4.28□□□□□ -1.72
SFPQ-203ENST00000466213 UBE2AP49459 152 aa4.28□□□□□ -1.72
SFPQ-203ENST00000466213 TDRG1Q3Y452 100 aa4.28□□□□□ -1.72
SFPQ-203ENST00000466213 PRR9Q5T870 116 aa4.28□□□□□ -1.72
SFPQ-203ENST00000466213 Q6ZUT4 128 aa4.28□□□□□ -1.72
SFPQ-203ENST00000466213 OPRPNQ99935 248 aaPredicted RBP4.28□□□□□ -1.72
SFPQ-203ENST00000466213 NOP10Q9NPE3 64 aaKnown RBP4.28□□□□□ -1.72
SFPQ-203ENST00000466213 SERP1Q9Y6X1 66 aa4.28□□□□□ -1.72
SFPQ-203ENST00000466213 VWFP04275 2813 aa4.27□□□□□ -1.73
SFPQ-203ENST00000466213 NOTCH1P46531 2555 aa4.27□□□□□ -1.73
SFPQ-203ENST00000466213 C19orf71A6NCJ1 209 aa4.27□□□□□ -1.73
SFPQ-203ENST00000466213 H3BT86 120 aa4.27□□□□□ -1.73
SFPQ-203ENST00000466213 M0R2P5 195 aa4.27□□□□□ -1.73
SFPQ-203ENST00000466213 BPY2O14599 106 aa4.27□□□□□ -1.73
SFPQ-203ENST00000466213 HBDP02042 147 aa4.27□□□□□ -1.73
SFPQ-203ENST00000466213 ARMS2P0C7Q2 107 aa4.27□□□□□ -1.73
SFPQ-203ENST00000466213 DEFB130BP0DP73 79 aa4.27□□□□□ -1.73
SFPQ-203ENST00000466213 DEFB130AP0DP74 79 aa4.27□□□□□ -1.73
SFPQ-203ENST00000466213 CRIP1P50238 77 aa4.27□□□□□ -1.73
SFPQ-203ENST00000466213 RNASE13Q5GAN3 156 aaKnown RBP4.27□□□□□ -1.73
SFPQ-203ENST00000466213 C7orf65Q6ZTY9 151 aa4.27□□□□□ -1.73
SFPQ-203ENST00000466213 LINC00588Q9Y4M8 146 aa4.27□□□□□ -1.73
SFPQ-203ENST00000466213 IGKV3D-20A0A0C4DH25 116 aa4.26□□□□□ -1.73
SFPQ-203ENST00000466213 A0A0J9YWU9 116 aa4.26□□□□□ -1.73
SFPQ-203ENST00000466213 H3BVH4 76 aa4.26□□□□□ -1.73
SFPQ-203ENST00000466213 K7ERS5 55 aa4.26□□□□□ -1.73
SFPQ-203ENST00000466213 DEFB4AO15263 64 aa4.26□□□□□ -1.73
SFPQ-203ENST00000466213 FAM104BQ5XKR9 115 aa4.26□□□□□ -1.73
SFPQ-203ENST00000466213 TSKUQ8WUA8 353 aa4.26□□□□□ -1.73
SFPQ-203ENST00000466213 DIRC1Q969H9 104 aa4.26□□□□□ -1.73
SFPQ-203ENST00000466213 GFRA4Q9GZZ7 299 aa4.26□□□□□ -1.73
SFPQ-203ENST00000466213 UQCR10Q9UDW1 63 aa4.26□□□□□ -1.73
SFPQ-203ENST00000466213 TP53TG3Q9ULZ0 132 aa4.26□□□□□ -1.73
SFPQ-203ENST00000466213 CELA1Q9UNI1 258 aa4.26□□□□□ -1.73
SFPQ-203ENST00000466213 TRRAPQ9Y4A5 3859 aa4.25□□□□□ -1.73
SFPQ-203ENST00000466213 LEPROTO15243 131 aa4.25□□□□□ -1.73
SFPQ-203ENST00000466213 TRACP01848 142 aa4.25□□□□□ -1.73
SFPQ-203ENST00000466213 Q8NAQ8 132 aa4.25□□□□□ -1.73
SFPQ-203ENST00000466213 GTSF1Q8WW33 167 aa4.25□□□□□ -1.73
SFPQ-203ENST00000466213 SCRT2Q9NQ03 307 aa4.25□□□□□ -1.73
SFPQ-203ENST00000466213 ANK2Q01484 3957 aa4.24□□□□□ -1.73
SFPQ-203ENST00000466213 TRAV16A0A0A6YYK6 109 aaPredicted RBP4.24□□□□□ -1.73
SFPQ-203ENST00000466213 TRGV4A0A0C4DH28 118 aa4.24□□□□□ -1.73
SFPQ-203ENST00000466213 A0A1B0GUT8 65 aa4.24□□□□□ -1.73
SFPQ-203ENST00000466213 HIGD1CA8MV81 97 aa4.24□□□□□ -1.73
SFPQ-203ENST00000466213 K7ERJ3 54 aa4.24□□□□□ -1.73
SFPQ-203ENST00000466213 IGHV3-30-3P0DP02 117 aa4.24□□□□□ -1.73
SFPQ-203ENST00000466213 HTN3P15516 51 aa4.24□□□□□ -1.73
SFPQ-203ENST00000466213 TSPEAR-AS2P59090 65 aa4.24□□□□□ -1.73
SFPQ-203ENST00000466213 MRPL51Q4U2R6 128 aaKnown RBP4.24□□□□□ -1.73
SFPQ-203ENST00000466213 LUZP6Q538Z0 58 aa4.24□□□□□ -1.73
SFPQ-203ENST00000466213 LYZL1Q6UWQ5 148 aa4.24□□□□□ -1.73
SFPQ-203ENST00000466213 Q6ZQT7 251 aa4.24□□□□□ -1.73
SFPQ-203ENST00000466213 SPATA12Q7Z6I5 190 aa4.24□□□□□ -1.73
SFPQ-203ENST00000466213 C20orf203Q8NBC4 194 aa4.24□□□□□ -1.73
SFPQ-203ENST00000466213 V9GYV3 84 aa4.24□□□□□ -1.73
SFPQ-203ENST00000466213 AGRNO00468 2067 aa4.24□□□□□ -1.73
SFPQ-203ENST00000466213 PKD1L1Q8TDX9 2849 aa4.24□□□□□ -1.73
SFPQ-203ENST00000466213 MUC21A0A0G2JKD1 596 aa4.23□□□□□ -1.73
SFPQ-203ENST00000466213 MUC21A0A140T8X8 626 aa4.23□□□□□ -1.73
SFPQ-203ENST00000466213 SPINK4O60575 86 aa4.23□□□□□ -1.73
SFPQ-203ENST00000466213 APCSP02743 223 aa4.23□□□□□ -1.73
SFPQ-203ENST00000466213 PCP2Q8IVA1 136 aa4.23□□□□□ -1.73
SFPQ-203ENST00000466213 NBEAL1Q6ZS30 2694 aa4.23□□□□□ -1.73
SFPQ-203ENST00000466213 TRAV10A0A0B4J240 114 aa4.22□□□□□ -1.73
SFPQ-203ENST00000466213 SMIM27A0A1W2PRY6 76 aa4.22□□□□□ -1.73
SFPQ-203ENST00000466213 IGHV3-53P01767 116 aa4.22□□□□□ -1.73
SFPQ-203ENST00000466213 MGPP08493 103 aa4.22□□□□□ -1.73
SFPQ-203ENST00000466213 RNASE3P12724 160 aaKnown RBP4.22□□□□□ -1.73
SFPQ-203ENST00000466213 MRPS36P82909 103 aaKnown RBP4.22□□□□□ -1.73
SFPQ-203ENST00000466213 Q0VG73 95 aa4.22□□□□□ -1.73
SFPQ-203ENST00000466213 ZNF56Q15929 161 aa4.22□□□□□ -1.73
SFPQ-203ENST00000466213 FAM74A4Q5TZK3 123 aa4.22□□□□□ -1.73
SFPQ-203ENST00000466213 Q6ZTI0 123 aa4.22□□□□□ -1.73
SFPQ-203ENST00000466213 AMN1Q8IY45 258 aa4.22□□□□□ -1.73
SFPQ-203ENST00000466213 OR10AG1Q8NH19 301 aa4.22□□□□□ -1.73
SFPQ-203ENST00000466213 DEFB131BA0A096LNP1 70 aa4.21□□□□□ -1.73
SFPQ-203ENST00000466213 IGLC3P0DOY3 106 aa4.21□□□□□ -1.73
SFPQ-203ENST00000466213 ZFP2Q6ZN57 461 aa4.21□□□□□ -1.73
SFPQ-203ENST00000466213 C14orf178Q8N769 122 aaPredicted RBP4.21□□□□□ -1.73
SFPQ-203ENST00000466213 ATP6V0E2Q8NHE4 81 aa4.21□□□□□ -1.73
SFPQ-203ENST00000466213 SCGB3A1Q96QR1 104 aa4.21□□□□□ -1.73
SFPQ-203ENST00000466213 DPH3P1Q9H4G8 78 aa4.21□□□□□ -1.73
SFPQ-203ENST00000466213 IGHV3-73A0A0B4J1V6 119 aa4.21□□□□□ -1.74
SFPQ-203ENST00000466213 NUPR2A6NF83 97 aa4.21□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 7.5 ms