RNA–Protein interactions for RNA: ENST00000466154.5

SLX4-202, Transcript of SLX4 structure-specific endonuclease subunit, humanhuman

TSL 1 (best)

Gene SLX4, Length 3,228 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLX4-202ENST00000466154 GAGE2BQ13066 116 aa11.39□□□□□ -0.59
SLX4-202ENST00000466154 GAGE2EQ4V326 116 aa11.39□□□□□ -0.59
SLX4-202ENST00000466154 GAGE2DQ9UEU5 116 aa11.39□□□□□ -0.59
SLX4-202ENST00000466154 PRO0255Q9UI72 69 aa11.39□□□□□ -0.59
SLX4-202ENST00000466154 FAM19A3Q7Z5A8 133 aa11.39□□□□□ -0.59
SLX4-202ENST00000466154 LINC00269Q8N2A0 174 aa11.39□□□□□ -0.59
SLX4-202ENST00000466154 ANGP03950 147 aaKnown RBP11.39□□□□□ -0.59
SLX4-202ENST00000466154 LINC00337Q8N6G1 96 aa11.39□□□□□ -0.59
SLX4-202ENST00000466154 H3BT86 120 aa11.38□□□□□ -0.59
SLX4-202ENST00000466154 SS18Q15532 418 aa11.38□□□□□ -0.59
SLX4-202ENST00000466154 FAM218AQ96MZ4 157 aa11.38□□□□□ -0.59
SLX4-202ENST00000466154 KMT2BQ9UMN6 2715 aaPredicted RBP11.38□□□□□ -0.59
SLX4-202ENST00000466154 DAD1P61803 113 aa11.37□□□□□ -0.59
SLX4-202ENST00000466154 C15orf53Q8NAA6 179 aa11.37□□□□□ -0.59
SLX4-202ENST00000466154 FLNBO75369 2602 aaKnown RBP11.37□□□□□ -0.59
SLX4-202ENST00000466154 ATP5G1P05496 136 aa11.37□□□□□ -0.59
SLX4-202ENST00000466154 CCL18P55774 89 aa11.37□□□□□ -0.59
SLX4-202ENST00000466154 KIR2DL5BQ8NHK3 375 aa11.37□□□□□ -0.59
SLX4-202ENST00000466154 IGHV4-28A0A0C4DH34 117 aa11.36□□□□□ -0.59
SLX4-202ENST00000466154 C9orf66Q5T8R8 295 aa11.36□□□□□ -0.59
SLX4-202ENST00000466154 A0A087WZ39 114 aa11.35□□□□□ -0.59
SLX4-202ENST00000466154 BAALC-AS2P0C853 105 aa11.35□□□□□ -0.59
SLX4-202ENST00000466154 CELA1Q9UNI1 258 aa11.35□□□□□ -0.59
SLX4-202ENST00000466154 TRAV13-2A0A0B4J235 113 aa11.35□□□□□ -0.59
SLX4-202ENST00000466154 IGKV2-28A0A075B6P5 120 aa11.34□□□□□ -0.59
SLX4-202ENST00000466154 IGKV2D-28P01615 120 aa11.34□□□□□ -0.59
SLX4-202ENST00000466154 PRR3P79522 188 aaKnown RBP11.34□□□□□ -0.59
SLX4-202ENST00000466154 LINC00526Q96FQ7 95 aa11.34□□□□□ -0.59
SLX4-202ENST00000466154 MALP21145 153 aa11.33□□□□□ -0.59
SLX4-202ENST00000466154 SMIM11BQ8TCY0 68 aa11.33□□□□□ -0.6
SLX4-202ENST00000466154 M0QXV9 152 aa11.33□□□□□ -0.6
SLX4-202ENST00000466154 DNAL4O96015 105 aa11.33□□□□□ -0.6
SLX4-202ENST00000466154 NHLRC4P0CG21 123 aaPredicted RBP11.32□□□□□ -0.6
SLX4-202ENST00000466154 C9orf116Q5BN46 136 aaPredicted RBP11.32□□□□□ -0.6
SLX4-202ENST00000466154 NDUFV3P56181 108 aaKnown RBP11.32□□□□□ -0.6
SLX4-202ENST00000466154 MRPL23Q16540 153 aaKnown RBP11.32□□□□□ -0.6
SLX4-202ENST00000466154 PPDPFQ9H3Y8 114 aa11.31□□□□□ -0.6
SLX4-202ENST00000466154 A0A087WYN8 130 aa11.3□□□□□ -0.6
SLX4-202ENST00000466154 SLPIP03973 132 aa11.3□□□□□ -0.6
SLX4-202ENST00000466154 IBA57-AS1B1ANH7 110 aa11.3□□□□□ -0.6
SLX4-202ENST00000466154 APOC4P55056 127 aa11.3□□□□□ -0.6
SLX4-202ENST00000466154 CHCHD10Q8WYQ3 142 aaPredicted RBP11.29□□□□□ -0.6
SLX4-202ENST00000466154 SMIM9A6NGZ8 99 aa11.28□□□□□ -0.6
SLX4-202ENST00000466154 REG3AQ06141 175 aa11.28□□□□□ -0.6
SLX4-202ENST00000466154 F8P00451 2351 aa11.28□□□□□ -0.6
SLX4-202ENST00000466154 LECT2O14960 151 aa11.28□□□□□ -0.6
SLX4-202ENST00000466154 GAGE2AQ6NT46 116 aa11.28□□□□□ -0.6
SLX4-202ENST00000466154 LYRM9A8MSI8 78 aa11.27□□□□□ -0.61
SLX4-202ENST00000466154 LINC00612Q8N6U2 182 aa11.26□□□□□ -0.61
SLX4-202ENST00000466154 IGHV4-30-4P0DP06 118 aa11.26□□□□□ -0.61
SLX4-202ENST00000466154 KLK12Q9UKR0 248 aa11.26□□□□□ -0.61
SLX4-202ENST00000466154 RPL28P46779 137 aaKnown RBP11.25□□□□□ -0.61
SLX4-202ENST00000466154 A0A1B0GUV1 79 aa11.25□□□□□ -0.61
SLX4-202ENST00000466154 TRACP01848 142 aa11.24□□□□□ -0.61
SLX4-202ENST00000466154 C6orf223Q8N319 242 aa11.24□□□□□ -0.61
SLX4-202ENST00000466154 OXLD1Q5BKU9 147 aa11.24□□□□□ -0.61
SLX4-202ENST00000466154 RETNQ9HD89 108 aa11.24□□□□□ -0.61
SLX4-202ENST00000466154 PKD1L1Q8TDX9 2849 aa11.23□□□□□ -0.61
SLX4-202ENST00000466154 NCR3O14931 201 aa11.23□□□□□ -0.61
SLX4-202ENST00000466154 SPART-AS1P0CW21 52 aa11.23□□□□□ -0.61
SLX4-202ENST00000466154 Q8IZM0 81 aa11.22□□□□□ -0.61
SLX4-202ENST00000466154 C9orf129Q5T035 196 aaKnown RBP11.22□□□□□ -0.61
SLX4-202ENST00000466154 C14orf132Q9NPU4 83 aa11.22□□□□□ -0.61
SLX4-202ENST00000466154 STAB1Q9NY15 2570 aa11.22□□□□□ -0.61
SLX4-202ENST00000466154 CD164L2Q6UWJ8 174 aa11.22□□□□□ -0.61
SLX4-202ENST00000466154 LOC107984640A0A0U1RRK4 108 aa11.21□□□□□ -0.61
SLX4-202ENST00000466154 Q8NAQ8 132 aa11.21□□□□□ -0.61
SLX4-202ENST00000466154 UNQ6190/PRO20217Q6UXQ8 127 aa11.19□□□□□ -0.62
SLX4-202ENST00000466154 MAST4O15021 2626 aa11.19□□□□□ -0.62
SLX4-202ENST00000466154 C10orf25Q5T742 122 aa11.18□□□□□ -0.62
SLX4-202ENST00000466154 LINC01600Q96MT4 127 aa11.18□□□□□ -0.62
SLX4-202ENST00000466154 MIFP14174 115 aa11.18□□□□□ -0.62
SLX4-202ENST00000466154 SPAG11BQ08648 103 aa11.17□□□□□ -0.62
SLX4-202ENST00000466154 SMCR5Q8TEV8 140 aa11.17□□□□□ -0.62
SLX4-202ENST00000466154 KLK5Q9Y337 293 aaPredicted RBP11.17□□□□□ -0.62
SLX4-202ENST00000466154 C22orf24Q9Y442 160 aa11.17□□□□□ -0.62
SLX4-202ENST00000466154 NOTCH1P46531 2555 aa11.17□□□□□ -0.62
SLX4-202ENST00000466154 S100A7L2Q5SY68 101 aa11.16□□□□□ -0.62
SLX4-202ENST00000466154 H0YGX0 51 aa11.16□□□□□ -0.62
SLX4-202ENST00000466154 KIAA0087Q14695 138 aa11.16□□□□□ -0.62
SLX4-202ENST00000466154 DEFB121Q5J5C9 76 aa11.15□□□□□ -0.62
SLX4-202ENST00000466154 FAM240AA0A1B0GVK7 77 aa11.14□□□□□ -0.63
SLX4-202ENST00000466154 INAFM2P0DMQ5 153 aa11.14□□□□□ -0.63
SLX4-202ENST00000466154 HIGD2BQ4VC39 106 aa11.13□□□□□ -0.63
SLX4-202ENST00000466154 XAGE1AQ9HD64 81 aa11.13□□□□□ -0.63
SLX4-202ENST00000466154 CYSRT1A8MQ03 144 aa11.13□□□□□ -0.63
SLX4-202ENST00000466154 FBN1P35555 2871 aaKnown RBP11.13□□□□□ -0.63
SLX4-202ENST00000466154 Q8NDZ9 215 aa11.13□□□□□ -0.63
SLX4-202ENST00000466154 FAM236AA0A1B0GUQ0 79 aa11.12□□□□□ -0.63
SLX4-202ENST00000466154 FAM236BA0A1B0GV22 79 aa11.12□□□□□ -0.63
SLX4-202ENST00000466154 C6orf99Q4VX62 202 aa11.12□□□□□ -0.63
SLX4-202ENST00000466154 LELP1Q5T871 98 aa11.12□□□□□ -0.63
SLX4-202ENST00000466154 RPL18AQ02543 176 aaKnown RBP11.11□□□□□ -0.63
SLX4-202ENST00000466154 ORMDL1Q9P0S3 153 aa11.11□□□□□ -0.63
SLX4-202ENST00000466154 WFDC10BQ8IUB3 73 aa11.11□□□□□ -0.63
SLX4-202ENST00000466154 ACYP1P07311 99 aa11.1□□□□□ -0.63
SLX4-202ENST00000466154 C9orf153Q5TBE3 101 aa11.1□□□□□ -0.63
SLX4-202ENST00000466154 TENM3Q9P273 2699 aa11.1□□□□□ -0.63
SLX4-202ENST00000466154 Q6ZTC4 211 aa11.09□□□□□ -0.63
SLX4-202ENST00000466154 IGKV3D-7A0A0C4DH55 119 aa11.09□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 112.5 ms