RNA–Protein interactions for RNA: ENST00000465229.5

EXOSC3-203, Transcript of exosome component 3, humanhuman

TSL 2

Gene EXOSC3, Length 1,625 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC3-203ENST00000465229 LINC00959A0A1B0GUT2 108 aa11.38□□□□□ -0.59
EXOSC3-203ENST00000465229 CFC1BP0CG36 223 aa11.38□□□□□ -0.59
EXOSC3-203ENST00000465229 CFC1P0CG37 223 aa11.38□□□□□ -0.59
EXOSC3-203ENST00000465229 IFITM1P13164 125 aa11.38□□□□□ -0.59
EXOSC3-203ENST00000465229 HERV-K104P63124 156 aa11.38□□□□□ -0.59
EXOSC3-203ENST00000465229 MIAQ16674 131 aa11.38□□□□□ -0.59
EXOSC3-203ENST00000465229 MUSTN1Q8IVN3 82 aa11.38□□□□□ -0.59
EXOSC3-203ENST00000465229 LINC00269Q8N2A0 174 aa11.38□□□□□ -0.59
EXOSC3-203ENST00000465229 DNAH6Q9C0G6 4158 aa11.38□□□□□ -0.59
EXOSC3-203ENST00000465229 CIRBPQ14011 172 aaKnown RBP11.38□□□□□ -0.59
EXOSC3-203ENST00000465229 ZNF625Q96I27 306 aaPredicted RBP11.38□□□□□ -0.59
EXOSC3-203ENST00000465229 A0A087WZ39 114 aa11.37□□□□□ -0.59
EXOSC3-203ENST00000465229 A0A0B4J2C4 111 aa11.37□□□□□ -0.59
EXOSC3-203ENST00000465229 A4D1N5 150 aa11.37□□□□□ -0.59
EXOSC3-203ENST00000465229 IBA57-AS1B1ANH7 110 aa11.37□□□□□ -0.59
EXOSC3-203ENST00000465229 LINC01561Q8N1V8 128 aa11.37□□□□□ -0.59
EXOSC3-203ENST00000465229 PRR34Q9NV39 138 aa11.37□□□□□ -0.59
EXOSC3-203ENST00000465229 PGPEP1Q9NXJ5 209 aa11.37□□□□□ -0.59
EXOSC3-203ENST00000465229 KMT2CQ8NEZ4 4911 aaKnown RBP11.37□□□□□ -0.59
EXOSC3-203ENST00000465229 M0R2N4 97 aa11.36□□□□□ -0.59
EXOSC3-203ENST00000465229 APOMO95445 188 aa11.36□□□□□ -0.59
EXOSC3-203ENST00000465229 SS18Q15532 418 aa11.36□□□□□ -0.59
EXOSC3-203ENST00000465229 ADAMTSL4-AS1Q5T5F5 129 aa11.36□□□□□ -0.59
EXOSC3-203ENST00000465229 ENHOQ6UWT2 76 aa11.36□□□□□ -0.59
EXOSC3-203ENST00000465229 PRO1854Q9UHT4 67 aa11.36□□□□□ -0.59
EXOSC3-203ENST00000465229 REG3AQ06141 175 aa11.35□□□□□ -0.59
EXOSC3-203ENST00000465229 TTC32Q5I0X7 151 aa11.35□□□□□ -0.59
EXOSC3-203ENST00000465229 CLPSL2Q6UWE3 100 aa11.35□□□□□ -0.59
EXOSC3-203ENST00000465229 UBE2WQ96B02 151 aa11.35□□□□□ -0.59
EXOSC3-203ENST00000465229 PPDPFQ9H3Y8 114 aa11.35□□□□□ -0.59
EXOSC3-203ENST00000465229 Q6ZR54 194 aa11.35□□□□□ -0.59
EXOSC3-203ENST00000465229 IGKV3OR2-268A0A0C4DH90 116 aa11.34□□□□□ -0.59
EXOSC3-203ENST00000465229 TSPAN13O95857 204 aa11.34□□□□□ -0.59
EXOSC3-203ENST00000465229 SFTA2Q6UW10 78 aa11.34□□□□□ -0.59
EXOSC3-203ENST00000465229 COX7B2Q8TF08 81 aa11.34□□□□□ -0.59
EXOSC3-203ENST00000465229 COPS9Q8WXC6 57 aa11.34□□□□□ -0.59
EXOSC3-203ENST00000465229 PRSS2P07478 247 aa11.33□□□□□ -0.6
EXOSC3-203ENST00000465229 LYRM7Q5U5X0 104 aa11.33□□□□□ -0.6
EXOSC3-203ENST00000465229 CRPP02741 224 aa11.32□□□□□ -0.6
EXOSC3-203ENST00000465229 Q9HAA7 133 aa11.31□□□□□ -0.6
EXOSC3-203ENST00000465229 HYDINQ4G0P3 5121 aa11.31□□□□□ -0.6
EXOSC3-203ENST00000465229 DNAH2Q9P225 4427 aa11.31□□□□□ -0.6
EXOSC3-203ENST00000465229 EIF4EBP3O60516 100 aaPredicted RBP11.3□□□□□ -0.6
EXOSC3-203ENST00000465229 IGLV10-54A0A075B6I4 117 aa11.29□□□□□ -0.6
EXOSC3-203ENST00000465229 CD164L2Q6UWJ8 174 aa11.29□□□□□ -0.6
EXOSC3-203ENST00000465229 TRAV8-4A0A0B4J246 113 aa11.28□□□□□ -0.6
EXOSC3-203ENST00000465229 C5orf38Q86SI9 138 aa11.28□□□□□ -0.6
EXOSC3-203ENST00000465229 ERG28Q9UKR5 140 aa11.28□□□□□ -0.6
EXOSC3-203ENST00000465229 DNAH10Q8IVF4 4471 aa11.28□□□□□ -0.6
EXOSC3-203ENST00000465229 XCL1P47992 114 aa11.27□□□□□ -0.6
EXOSC3-203ENST00000465229 MEIG1Q5JSS6 88 aa11.27□□□□□ -0.6
EXOSC3-203ENST00000465229 LINC00308Q8TCZ7 52 aa11.27□□□□□ -0.6
EXOSC3-203ENST00000465229 CHCHD10Q8WYQ3 142 aaPredicted RBP11.27□□□□□ -0.61
EXOSC3-203ENST00000465229 IGKV2D-24A0A075B6R9 120 aa11.26□□□□□ -0.61
EXOSC3-203ENST00000465229 KRTAP26-1Q6PEX3 210 aa11.26□□□□□ -0.61
EXOSC3-203ENST00000465229 Q8IZM0 81 aa11.26□□□□□ -0.61
EXOSC3-203ENST00000465229 TRBV20-1A0A075B6N2 111 aa11.25□□□□□ -0.61
EXOSC3-203ENST00000465229 C6orf223Q8N319 242 aa11.25□□□□□ -0.61
EXOSC3-203ENST00000465229 C1orf43Q9BWL3 253 aa11.25□□□□□ -0.61
EXOSC3-203ENST00000465229 TOMM7Q9P0U1 55 aa11.25□□□□□ -0.61
EXOSC3-203ENST00000465229 LOC107984156A0A0G2JMH3 177 aa11.24□□□□□ -0.61
EXOSC3-203ENST00000465229 F8W1H4 67 aa11.24□□□□□ -0.61
EXOSC3-203ENST00000465229 COX7A2LO14548 114 aa11.24□□□□□ -0.61
EXOSC3-203ENST00000465229 C1orf134Q5TEV5 83 aa11.24□□□□□ -0.61
EXOSC3-203ENST00000465229 ARL17AQ8IVW1 177 aa11.24□□□□□ -0.61
EXOSC3-203ENST00000465229 RMI2Q96E14 147 aa11.24□□□□□ -0.61
EXOSC3-203ENST00000465229 Q6ZRN7 208 aaPredicted RBP11.24□□□□□ -0.61
EXOSC3-203ENST00000465229 DAND5Q8N907 189 aa11.24□□□□□ -0.61
EXOSC3-203ENST00000465229 RYR2Q92736 4967 aa11.23□□□□□ -0.61
EXOSC3-203ENST00000465229 C6orf226Q5I0X4 101 aa11.23□□□□□ -0.61
EXOSC3-203ENST00000465229 TRBV30A0A0K0K1B3 111 aa11.22□□□□□ -0.61
EXOSC3-203ENST00000465229 GAGE12HA6NDE8 117 aa11.22□□□□□ -0.61
EXOSC3-203ENST00000465229 H3BMG7 143 aa11.22□□□□□ -0.61
EXOSC3-203ENST00000465229 NPC2P61916 151 aa11.22□□□□□ -0.61
EXOSC3-203ENST00000465229 CXCL5P42830 114 aa11.21□□□□□ -0.61
EXOSC3-203ENST00000465229 FOXI1Q12951 378 aa11.21□□□□□ -0.61
EXOSC3-203ENST00000465229 SOSTDC1Q6X4U4 206 aa11.21□□□□□ -0.61
EXOSC3-203ENST00000465229 DNAH17Q9UFH2 4485 aa11.21□□□□□ -0.62
EXOSC3-203ENST00000465229 A0A0U1RRA0 63 aa11.19□□□□□ -0.62
EXOSC3-203ENST00000465229 SCGB1C2P0DMR2 95 aa11.19□□□□□ -0.62
EXOSC3-203ENST00000465229 PSMB2P49721 201 aa11.19□□□□□ -0.62
EXOSC3-203ENST00000465229 KIAA0087Q14695 138 aa11.19□□□□□ -0.62
EXOSC3-203ENST00000465229 Q1RN00 199 aa11.19□□□□□ -0.62
EXOSC3-203ENST00000465229 PRO0461Q9UI25 63 aa11.19□□□□□ -0.62
EXOSC3-203ENST00000465229 PSCAO43653 123 aa11.18□□□□□ -0.62
EXOSC3-203ENST00000465229 OCIAD2Q56VL3 154 aa11.18□□□□□ -0.62
EXOSC3-203ENST00000465229 MIR7-3HGQ8N6C7 128 aa11.18□□□□□ -0.62
EXOSC3-203ENST00000465229 RTL8CO15255 209 aa11.17□□□□□ -0.62
EXOSC3-203ENST00000465229 TCL1BO95988 128 aa11.17□□□□□ -0.62
EXOSC3-203ENST00000465229 MALP21145 153 aa11.17□□□□□ -0.62
EXOSC3-203ENST00000465229 H7C2G1 150 aa11.17□□□□□ -0.62
EXOSC3-203ENST00000465229 LINC00158P58513 81 aa11.17□□□□□ -0.62
EXOSC3-203ENST00000465229 FRAS1Q86XX4 4008 aa11.16□□□□□ -0.62
EXOSC3-203ENST00000465229 RPL13AP40429 203 aaKnown RBP11.16□□□□□ -0.62
EXOSC3-203ENST00000465229 CKS1BP61024 79 aa11.16□□□□□ -0.62
EXOSC3-203ENST00000465229 CFAP161Q6P656 301 aa11.16□□□□□ -0.62
EXOSC3-203ENST00000465229 K7ERU9 68 aa11.15□□□□□ -0.62
EXOSC3-203ENST00000465229 TRIAP1O43715 76 aa11.15□□□□□ -0.62
EXOSC3-203ENST00000465229 COX6CP09669 75 aa11.15□□□□□ -0.62
EXOSC3-203ENST00000465229 COX17Q14061 63 aa11.15□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 8.6 ms