RNA–Protein interactions for RNA: ENST00000464976.1

RAPGEF4-206, Transcript of Rap guanine nucleotide exchange factor 4, humanhuman

TSL 1 (best)

Gene RAPGEF4, Length 980 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF4-206ENST00000464976 PLEKHB2Q96CS7 222 aa3.35□□□□□ -1.87
RAPGEF4-206ENST00000464976 VCX2Q9H322 139 aa3.35□□□□□ -1.87
RAPGEF4-206ENST00000464976 SPANXB1Q9NS25 103 aaPredicted RBP3.35□□□□□ -1.87
RAPGEF4-206ENST00000464976 A0A0J9YY99 117 aa3.34□□□□□ -1.87
RAPGEF4-206ENST00000464976 TRBV10-1A0A0K0K1A3 114 aa3.34□□□□□ -1.87
RAPGEF4-206ENST00000464976 TMEM223A0PJW6 202 aa3.34□□□□□ -1.87
RAPGEF4-206ENST00000464976 IGLL5B9A064 214 aa3.34□□□□□ -1.87
RAPGEF4-206ENST00000464976 ZNF22P17026 224 aaPredicted RBP3.34□□□□□ -1.87
RAPGEF4-206ENST00000464976 LGALS3P17931 250 aaKnown RBP3.34□□□□□ -1.87
RAPGEF4-206ENST00000464976 UBE2D1P51668 147 aa3.34□□□□□ -1.87
RAPGEF4-206ENST00000464976 EMP1P54849 157 aa3.34□□□□□ -1.87
RAPGEF4-206ENST00000464976 MRPS36P82909 103 aaKnown RBP3.34□□□□□ -1.87
RAPGEF4-206ENST00000464976 SMAGPQ0VAQ4 97 aa3.34□□□□□ -1.87
RAPGEF4-206ENST00000464976 COTL1Q14019 142 aa3.34□□□□□ -1.87
RAPGEF4-206ENST00000464976 OCIAD2Q56VL3 154 aa3.34□□□□□ -1.87
RAPGEF4-206ENST00000464976 ZNRF2Q8NHG8 242 aa3.34□□□□□ -1.87
RAPGEF4-206ENST00000464976 TMEM263Q8WUH6 116 aaKnown RBP3.34□□□□□ -1.87
RAPGEF4-206ENST00000464976 AMELXQ99217 191 aa3.34□□□□□ -1.87
RAPGEF4-206ENST00000464976 TIMM21Q9BVV7 248 aa3.34□□□□□ -1.87
RAPGEF4-206ENST00000464976 PLECQ15149 4684 aaKnown RBP3.33□□□□□ -1.88
RAPGEF4-206ENST00000464976 SACSQ9NZJ4 4579 aa3.33□□□□□ -1.88
RAPGEF4-206ENST00000464976 IGHV3-73A0A0B4J1V6 119 aa3.33□□□□□ -1.88
RAPGEF4-206ENST00000464976 TRAV4A0A0B4J268 109 aa3.33□□□□□ -1.88
RAPGEF4-206ENST00000464976 A0A0J9YXY3 114 aa3.33□□□□□ -1.88
RAPGEF4-206ENST00000464976 TINCRA0A1B0GVN0 87 aa3.33□□□□□ -1.88
RAPGEF4-206ENST00000464976 TMEM238C9JI98 176 aa3.33□□□□□ -1.88
RAPGEF4-206ENST00000464976 TSPEAR-AS2P59090 65 aa3.33□□□□□ -1.88
RAPGEF4-206ENST00000464976 RBX1P62877 108 aa3.33□□□□□ -1.88
RAPGEF4-206ENST00000464976 SLC25A29Q8N8R3 303 aa3.33□□□□□ -1.88
RAPGEF4-206ENST00000464976 NAA38Q9BRA0 125 aaKnown RBP3.33□□□□□ -1.88
RAPGEF4-206ENST00000464976 MRPL16Q9NX20 251 aaKnown RBP3.33□□□□□ -1.88
RAPGEF4-206ENST00000464976 XCL2Q9UBD3 114 aa3.33□□□□□ -1.88
RAPGEF4-206ENST00000464976 TRGV1A0A0A0MS02 117 aa3.32□□□□□ -1.88
RAPGEF4-206ENST00000464976 A0A0J9YXV3 536 aa3.32□□□□□ -1.88
RAPGEF4-206ENST00000464976 IGLV1-51P01701 117 aa3.32□□□□□ -1.88
RAPGEF4-206ENST00000464976 IGHV3-30P01768 117 aa3.32□□□□□ -1.88
RAPGEF4-206ENST00000464976 PRB2P02812 416 aaPredicted RBP3.32□□□□□ -1.88
RAPGEF4-206ENST00000464976 IGHV3-30-5P0DP03 117 aa3.32□□□□□ -1.88
RAPGEF4-206ENST00000464976 AZU1P20160 251 aa3.32□□□□□ -1.88
RAPGEF4-206ENST00000464976 DAZ2Q13117 558 aaKnown RBP3.32□□□□□ -1.88
RAPGEF4-206ENST00000464976 Q6ZUT4 128 aa3.32□□□□□ -1.88
RAPGEF4-206ENST00000464976 DAZ4Q86SG3 579 aaKnown RBP3.32□□□□□ -1.88
RAPGEF4-206ENST00000464976 C1orf158Q8N1D5 194 aa3.32□□□□□ -1.88
RAPGEF4-206ENST00000464976 WFDC9Q8NEX5 89 aa3.32□□□□□ -1.88
RAPGEF4-206ENST00000464976 DEFB104AQ8WTQ1 72 aa3.32□□□□□ -1.88
RAPGEF4-206ENST00000464976 CHCHD7Q9BUK0 85 aa3.32□□□□□ -1.88
RAPGEF4-206ENST00000464976 DAZ3Q9NR90 486 aaKnown RBP3.32□□□□□ -1.88
RAPGEF4-206ENST00000464976 UBE2D4Q9Y2X8 147 aa3.32□□□□□ -1.88
RAPGEF4-206ENST00000464976 DNAH7Q8WXX0 4024 aa3.32□□□□□ -1.88
RAPGEF4-206ENST00000464976 DNAH1Q9P2D7 4330 aa3.31□□□□□ -1.88
RAPGEF4-206ENST00000464976 IGKV2D-29A0A075B6S2 120 aaPredicted RBP3.31□□□□□ -1.88
RAPGEF4-206ENST00000464976 IGHV1-58A0A0C4DH39 117 aa3.31□□□□□ -1.88
RAPGEF4-206ENST00000464976 IGKV2-29A2NJV5 120 aaPredicted RBP3.31□□□□□ -1.88
RAPGEF4-206ENST00000464976 KRTAP9-6A8MVA2 160 aa3.31□□□□□ -1.88
RAPGEF4-206ENST00000464976 F8W1H4 67 aa3.31□□□□□ -1.88
RAPGEF4-206ENST00000464976 PRM2P04554 102 aa3.31□□□□□ -1.88
RAPGEF4-206ENST00000464976 RPL13AP40429 203 aaKnown RBP3.31□□□□□ -1.88
RAPGEF4-206ENST00000464976 APOC4P55056 127 aa3.31□□□□□ -1.88
RAPGEF4-206ENST00000464976 C7orf33Q8WU49 177 aa3.31□□□□□ -1.88
RAPGEF4-206ENST00000464976 VPS25Q9BRG1 176 aa3.31□□□□□ -1.88
RAPGEF4-206ENST00000464976 GEMIN7Q9H840 131 aaKnown RBP3.31□□□□□ -1.88
RAPGEF4-206ENST00000464976 CSDC2Q9Y534 153 aaKnown RBP3.31□□□□□ -1.88
RAPGEF4-206ENST00000464976 DYNC2H1Q8NCM8 4307 aaKnown RBP3.31□□□□□ -1.88
RAPGEF4-206ENST00000464976 NBEAL2Q6ZNJ1 2754 aa3.3□□□□□ -1.88
RAPGEF4-206ENST00000464976 TRBV20-1A0A075B6N2 111 aa3.3□□□□□ -1.88
RAPGEF4-206ENST00000464976 TRAV16A0A0A6YYK6 109 aaPredicted RBP3.3□□□□□ -1.88
RAPGEF4-206ENST00000464976 A0A0B4J2C4 111 aa3.3□□□□□ -1.88
RAPGEF4-206ENST00000464976 H0Y9J4 135 aa3.3□□□□□ -1.88
RAPGEF4-206ENST00000464976 J3QR89 54 aa3.3□□□□□ -1.88
RAPGEF4-206ENST00000464976 TIMM17BO60830 172 aa3.3□□□□□ -1.88
RAPGEF4-206ENST00000464976 TSPAN13O95857 204 aa3.3□□□□□ -1.88
RAPGEF4-206ENST00000464976 IGHV3-30-3P0DP02 117 aa3.3□□□□□ -1.88
RAPGEF4-206ENST00000464976 UBE2D3P61077 147 aa3.3□□□□□ -1.88
RAPGEF4-206ENST00000464976 UBE2D2P62837 147 aa3.3□□□□□ -1.88
RAPGEF4-206ENST00000464976 HERVK_113P63121 156 aa3.3□□□□□ -1.88
RAPGEF4-206ENST00000464976 KPRPQ5T749 579 aaPredicted RBP3.3□□□□□ -1.88
RAPGEF4-206ENST00000464976 ZFAND6Q6FIF0 208 aa3.3□□□□□ -1.88
RAPGEF4-206ENST00000464976 Q6ZTI0 123 aa3.3□□□□□ -1.88
RAPGEF4-206ENST00000464976 FAM19A3Q7Z5A8 133 aa3.3□□□□□ -1.88
RAPGEF4-206ENST00000464976 C10orf126Q8N4M7 172 aa3.3□□□□□ -1.88
RAPGEF4-206ENST00000464976 FAM104AQ969W3 186 aa3.3□□□□□ -1.88
RAPGEF4-206ENST00000464976 SPANXDQ9BXN6 97 aa3.3□□□□□ -1.88
RAPGEF4-206ENST00000464976 SPANXCQ9NY87 97 aa3.3□□□□□ -1.88
RAPGEF4-206ENST00000464976 PRO1854Q9UHT4 67 aa3.3□□□□□ -1.88
RAPGEF4-206ENST00000464976 NDUFA12Q9UI09 145 aa3.3□□□□□ -1.88
RAPGEF4-206ENST00000464976 TENM3Q9P273 2699 aa3.3□□□□□ -1.88
RAPGEF4-206ENST00000464976 TRGV2A0A075B6R0 118 aa3.29□□□□□ -1.88
RAPGEF4-206ENST00000464976 TRBV6-4A0A1B0GX49 114 aa3.29□□□□□ -1.88
RAPGEF4-206ENST00000464976 H3BMG7 143 aa3.29□□□□□ -1.88
RAPGEF4-206ENST00000464976 UBE2L6O14933 153 aa3.29□□□□□ -1.88
RAPGEF4-206ENST00000464976 NDUFA1O15239 70 aa3.29□□□□□ -1.88
RAPGEF4-206ENST00000464976 APOMO95445 188 aa3.29□□□□□ -1.88
RAPGEF4-206ENST00000464976 MIAQ16674 131 aa3.29□□□□□ -1.88
RAPGEF4-206ENST00000464976 RNASE13Q5GAN3 156 aaKnown RBP3.29□□□□□ -1.88
RAPGEF4-206ENST00000464976 CEMP1Q6PRD7 247 aaPredicted RBP3.29□□□□□ -1.88
RAPGEF4-206ENST00000464976 SBSPONQ8IVN8 264 aa3.29□□□□□ -1.88
RAPGEF4-206ENST00000464976 ATP6V0E2Q8NHE4 81 aa3.29□□□□□ -1.88
RAPGEF4-206ENST00000464976 COPS9Q8WXC6 57 aa3.29□□□□□ -1.88
RAPGEF4-206ENST00000464976 CHCHD10Q8WYQ3 142 aaPredicted RBP3.29□□□□□ -1.88
RAPGEF4-206ENST00000464976 TMEM101Q96IK0 257 aa3.29□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms