RNA–Protein interactions for RNA: ENST00000463172.5

HDAC1-203, Transcript of histone deacetylase 1, humanhuman

TSL 2

Gene HDAC1, Length 895 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC1-203ENST00000463172 APOC3P02656 99 aa8.16□□□□□ -1.1
HDAC1-203ENST00000463172 GAGE2EQ4V326 116 aa8.16□□□□□ -1.1
HDAC1-203ENST00000463172 C10orf25Q5T742 122 aa8.16□□□□□ -1.1
HDAC1-203ENST00000463172 ZC2HC1BQ5TFG8 222 aa8.16□□□□□ -1.1
HDAC1-203ENST00000463172 GAGE2DQ9UEU5 116 aa8.16□□□□□ -1.1
HDAC1-203ENST00000463172 CXCL5P42830 114 aa8.15□□□□□ -1.1
HDAC1-203ENST00000463172 LINC00469Q8N7U9 141 aa8.15□□□□□ -1.1
HDAC1-203ENST00000463172 TRAPPC1Q9Y5R8 145 aa8.15□□□□□ -1.1
HDAC1-203ENST00000463172 C2orf82Q6UX34 121 aa8.14□□□□□ -1.11
HDAC1-203ENST00000463172 TINCRA0A1B0GVN0 87 aa8.13□□□□□ -1.11
HDAC1-203ENST00000463172 RAB5BP61020 215 aa8.13□□□□□ -1.11
HDAC1-203ENST00000463172 PMVKQ15126 192 aa8.13□□□□□ -1.11
HDAC1-203ENST00000463172 CDKN2A-AS1Q9UH64 79 aa8.13□□□□□ -1.11
HDAC1-203ENST00000463172 F8VRH5 84 aa8.12□□□□□ -1.11
HDAC1-203ENST00000463172 H3BRM9 83 aa8.12□□□□□ -1.11
HDAC1-203ENST00000463172 PDZD11Q5EBL8 140 aa8.12□□□□□ -1.11
HDAC1-203ENST00000463172 PHF5AQ7RTV0 110 aaKnown RBP8.12□□□□□ -1.11
HDAC1-203ENST00000463172 FAM19A5Q7Z5A7 132 aaPredicted RBP8.12□□□□□ -1.11
HDAC1-203ENST00000463172 PSORS1C2Q9UIG4 136 aa8.12□□□□□ -1.11
HDAC1-203ENST00000463172 UBE2BP63146 152 aa8.11□□□□□ -1.11
HDAC1-203ENST00000463172 C1orf137Q5JT78 98 aa8.11□□□□□ -1.11
HDAC1-203ENST00000463172 LINC01600Q96MT4 127 aa8.11□□□□□ -1.11
HDAC1-203ENST00000463172 CST9LQ9H4G1 147 aa8.11□□□□□ -1.11
HDAC1-203ENST00000463172 PLA2G2DQ9UNK4 145 aa8.11□□□□□ -1.11
HDAC1-203ENST00000463172 M0QXV9 152 aa8.1□□□□□ -1.11
HDAC1-203ENST00000463172 LINC00614P0C842 121 aa8.1□□□□□ -1.11
HDAC1-203ENST00000463172 COX7B2Q8TF08 81 aa8.1□□□□□ -1.11
HDAC1-203ENST00000463172 IGLV5-45A0A087WSX0 123 aa8.09□□□□□ -1.11
HDAC1-203ENST00000463172 FAM168BA1KXE4 195 aa8.09□□□□□ -1.11
HDAC1-203ENST00000463172 HBDP02042 147 aa8.09□□□□□ -1.11
HDAC1-203ENST00000463172 NDUFA6P56556 154 aa8.09□□□□□ -1.11
HDAC1-203ENST00000463172 SRSF9Q13242 221 aaKnown RBP eCLIP8.09□□□□□ -1.11
HDAC1-203ENST00000463172 SMIM1B2RUZ4 78 aa8.08□□□□□ -1.12
HDAC1-203ENST00000463172 ATP5LO75964 103 aa8.08□□□□□ -1.12
HDAC1-203ENST00000463172 LBHQ53QV2 105 aaPredicted RBP8.08□□□□□ -1.12
HDAC1-203ENST00000463172 C18orf32Q8TCD1 76 aa8.08□□□□□ -1.12
HDAC1-203ENST00000463172 MT1HL1P0DM35 61 aa8.07□□□□□ -1.12
HDAC1-203ENST00000463172 DIRC1Q969H9 104 aa8.07□□□□□ -1.12
HDAC1-203ENST00000463172 HMCN2Q8NDA2 5059 aa8.06□□□□□ -1.12
HDAC1-203ENST00000463172 IGLV7-43P04211 117 aa8.06□□□□□ -1.12
HDAC1-203ENST00000463172 C9orf129Q5T035 196 aaKnown RBP8.06□□□□□ -1.12
HDAC1-203ENST00000463172 SPINK8P0C7L1 97 aa8.05□□□□□ -1.12
HDAC1-203ENST00000463172 ODF1Q14990 250 aa8.05□□□□□ -1.12
HDAC1-203ENST00000463172 IGLC3P0DOY3 106 aa8.04□□□□□ -1.12
HDAC1-203ENST00000463172 SFTA2Q6UW10 78 aa8.03□□□□□ -1.12
HDAC1-203ENST00000463172 CHCHD1Q96BP2 118 aaKnown RBP8.03□□□□□ -1.12
HDAC1-203ENST00000463172 XAGE1AQ9HD64 81 aa8.03□□□□□ -1.12
HDAC1-203ENST00000463172 A0A096LNJ9 63 aa8.02□□□□□ -1.13
HDAC1-203ENST00000463172 NUPR1O60356 82 aa8.02□□□□□ -1.13
HDAC1-203ENST00000463172 PMCHL1Q16048 86 aa8.02□□□□□ -1.13
HDAC1-203ENST00000463172 BAGE3Q86Y29 109 aa8.02□□□□□ -1.13
HDAC1-203ENST00000463172 URB1-AS1Q96HZ7 61 aa8.02□□□□□ -1.13
HDAC1-203ENST00000463172 TP73-AS1Q9UF72 201 aa8.02□□□□□ -1.13
HDAC1-203ENST00000463172 C22orf24Q9Y442 160 aa8.02□□□□□ -1.13
HDAC1-203ENST00000463172 H0Y9J4 135 aa8.01□□□□□ -1.13
HDAC1-203ENST00000463172 ZNF22P17026 224 aaPredicted RBP8□□□□□ -1.13
HDAC1-203ENST00000463172 TMEM170BQ5T4T1 132 aa8□□□□□ -1.13
HDAC1-203ENST00000463172 MRPL55Q7Z7F7 128 aaKnown RBP8□□□□□ -1.13
HDAC1-203ENST00000463172 KRTAP7-1Q8IUC3 87 aa8□□□□□ -1.13
HDAC1-203ENST00000463172 NKAPP1Q8N9T2 125 aa8□□□□□ -1.13
HDAC1-203ENST00000463172 IGLV5-39A0A0G2JS06 123 aa7.99□□□□□ -1.13
HDAC1-203ENST00000463172 KRTAP10-8P60410 259 aa7.99□□□□□ -1.13
HDAC1-203ENST00000463172 CHTOPQ9Y3Y2 248 aaKnown RBP7.99□□□□□ -1.13
HDAC1-203ENST00000463172 HSBP1O75506 76 aa7.98□□□□□ -1.13
HDAC1-203ENST00000463172 COX17Q14061 63 aa7.98□□□□□ -1.13
HDAC1-203ENST00000463172 YPEL4Q96NS1 127 aa7.98□□□□□ -1.13
HDAC1-203ENST00000463172 TNXBP22105 4242 aa7.98□□□□□ -1.13
HDAC1-203ENST00000463172 TRAV12-1A0A0B4J245 112 aa7.97□□□□□ -1.13
HDAC1-203ENST00000463172 KRTAP11-1Q8IUC1 163 aa7.97□□□□□ -1.13
HDAC1-203ENST00000463172 CBLN2Q8IUK8 224 aa7.97□□□□□ -1.13
HDAC1-203ENST00000463172 IFI27L1Q96BM0 104 aa7.97□□□□□ -1.13
HDAC1-203ENST00000463172 C11orf86A6NJI1 115 aa7.96□□□□□ -1.14
HDAC1-203ENST00000463172 PFN2P35080 140 aa7.96□□□□□ -1.14
HDAC1-203ENST00000463172 RPL28P46779 137 aaKnown RBP7.96□□□□□ -1.14
HDAC1-203ENST00000463172 ERG28Q9UKR5 140 aa7.96□□□□□ -1.14
HDAC1-203ENST00000463172 IGLV1-50A0A075B6I6 118 aa7.95□□□□□ -1.14
HDAC1-203ENST00000463172 ZNF861PO60384 105 aa7.95□□□□□ -1.14
HDAC1-203ENST00000463172 RPL13AP40429 203 aaKnown RBP7.95□□□□□ -1.14
HDAC1-203ENST00000463172 RPL24P83731 157 aaKnown RBP7.95□□□□□ -1.14
HDAC1-203ENST00000463172 IGLV5-37A0A075B6J1 123 aa7.94□□□□□ -1.14
HDAC1-203ENST00000463172 LINC00167Q96N53 147 aa7.94□□□□□ -1.14
HDAC1-203ENST00000463172 BCE1O60756 84 aa7.93□□□□□ -1.14
HDAC1-203ENST00000463172 ATP6V1G1O75348 118 aa7.93□□□□□ -1.14
HDAC1-203ENST00000463172 TRGC2P03986 189 aa7.93□□□□□ -1.14
HDAC1-203ENST00000463172 GAGE10A6NGK3 116 aa7.92□□□□□ -1.14
HDAC1-203ENST00000463172 RPL37AP8A6NKH3 93 aa7.92□□□□□ -1.14
HDAC1-203ENST00000463172 ZNF625Q96I27 306 aaPredicted RBP7.92□□□□□ -1.14
HDAC1-203ENST00000463172 TMEM223A0PJW6 202 aa7.91□□□□□ -1.14
HDAC1-203ENST00000463172 LINC00587B1AMM8 73 aa7.91□□□□□ -1.14
HDAC1-203ENST00000463172 LEPROTL1O95214 131 aa7.91□□□□□ -1.14
HDAC1-203ENST00000463172 PRR26Q8N8Z3 221 aa7.91□□□□□ -1.14
HDAC1-203ENST00000463172 SND1-IT1Q9HBX3 110 aa7.91□□□□□ -1.14
HDAC1-203ENST00000463172 UBE2AP49459 152 aa7.9□□□□□ -1.14
HDAC1-203ENST00000463172 LINC00158P58513 81 aa7.9□□□□□ -1.14
HDAC1-203ENST00000463172 FAM19A2Q8N3H0 131 aa7.9□□□□□ -1.14
HDAC1-203ENST00000463172 HSPB8Q9UJY1 196 aa7.9□□□□□ -1.14
HDAC1-203ENST00000463172 UBR4Q5T4S7 5183 aa7.9□□□□□ -1.14
HDAC1-203ENST00000463172 H0Y8G0 127 aa7.89□□□□□ -1.15
HDAC1-203ENST00000463172 HERV-K104P63124 156 aa7.89□□□□□ -1.15
HDAC1-203ENST00000463172 SLC7A5P1Q8MH63 180 aa7.89□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms