RNA–Protein interactions for RNA: ENST00000463147.1

USH2A-203, Transcript of usherin, humanhuman

TSL 2

Gene USH2A, Length 618 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USH2A-203ENST00000463147 H0YGG7 62 aa1.59□□□□□ -2.15
USH2A-203ENST00000463147 IGHV3-33P01772 117 aa1.59□□□□□ -2.15
USH2A-203ENST00000463147 Q86TA4 180 aa1.59□□□□□ -2.15
USH2A-203ENST00000463147 DIRC1Q969H9 104 aa1.59□□□□□ -2.15
USH2A-203ENST00000463147 COX14Q96I36 57 aa1.59□□□□□ -2.15
USH2A-203ENST00000463147 RTTNQ86VV8 2226 aa1.58□□□□□ -2.16
USH2A-203ENST00000463147 A0A0J9YY99 117 aa1.58□□□□□ -2.16
USH2A-203ENST00000463147 TMEM30CPA0ZSE6 113 aa1.58□□□□□ -2.16
USH2A-203ENST00000463147 IQCF6A8MYZ5 107 aa1.58□□□□□ -2.16
USH2A-203ENST00000463147 E7EUB6 86 aa1.58□□□□□ -2.16
USH2A-203ENST00000463147 M0R3E3 92 aa1.58□□□□□ -2.16
USH2A-203ENST00000463147 NDUFC1O43677 76 aa1.58□□□□□ -2.16
USH2A-203ENST00000463147 BCE1O60756 84 aa1.58□□□□□ -2.16
USH2A-203ENST00000463147 IGHV3-30P01768 117 aa1.58□□□□□ -2.16
USH2A-203ENST00000463147 IGHV3-30-5P0DP03 117 aa1.58□□□□□ -2.16
USH2A-203ENST00000463147 PLGLAQ15195 96 aa1.58□□□□□ -2.16
USH2A-203ENST00000463147 S100A7L2Q5SY68 101 aa1.58□□□□□ -2.16
USH2A-203ENST00000463147 C10orf128Q5T292 105 aa1.58□□□□□ -2.16
USH2A-203ENST00000463147 Q6JHZ5 121 aa1.58□□□□□ -2.16
USH2A-203ENST00000463147 LINC00322Q6ZN03 302 aaPredicted RBP1.58□□□□□ -2.16
USH2A-203ENST00000463147 TMEM263Q8WUH6 116 aaKnown RBP1.58□□□□□ -2.16
USH2A-203ENST00000463147 FAM167A-AS1Q96KT0 104 aa1.58□□□□□ -2.16
USH2A-203ENST00000463147 SPTBP11277 2137 aa1.58□□□□□ -2.16
USH2A-203ENST00000463147 FREM3P0C091 2139 aa1.57□□□□□ -2.16
USH2A-203ENST00000463147 DNAL4O96015 105 aa1.57□□□□□ -2.16
USH2A-203ENST00000463147 CD52P31358 61 aa1.57□□□□□ -2.16
USH2A-203ENST00000463147 SNRPD3P62318 126 aaKnown RBP1.57□□□□□ -2.16
USH2A-203ENST00000463147 BLCAPP62952 87 aa1.57□□□□□ -2.16
USH2A-203ENST00000463147 RBM3P98179 157 aaKnown RBP1.57□□□□□ -2.16
USH2A-203ENST00000463147 PRCDQ00LT1 54 aa1.57□□□□□ -2.16
USH2A-203ENST00000463147 RHOHQ15669 191 aa1.57□□□□□ -2.16
USH2A-203ENST00000463147 C1orf137Q5JT78 98 aa1.57□□□□□ -2.16
USH2A-203ENST00000463147 ATP5EP2Q5VTU8 51 aa1.57□□□□□ -2.16
USH2A-203ENST00000463147 KLK9Q9UKQ9 250 aa1.57□□□□□ -2.16
USH2A-203ENST00000463147 TANC2Q9HCD6 1990 aa1.57□□□□□ -2.16
USH2A-203ENST00000463147 FAM223BA6NKX1 122 aa1.56□□□□□ -2.16
USH2A-203ENST00000463147 SAA1P0DJI8 122 aaPredicted RBP1.56□□□□□ -2.16
USH2A-203ENST00000463147 COX6B1P14854 86 aa1.56□□□□□ -2.16
USH2A-203ENST00000463147 CNBPP62633 177 aaKnown RBP1.56□□□□□ -2.16
USH2A-203ENST00000463147 CASC2Q6XLA1 102 aa1.56□□□□□ -2.16
USH2A-203ENST00000463147 MUSTN1Q8IVN3 82 aa1.56□□□□□ -2.16
USH2A-203ENST00000463147 C20orf197Q8N268 126 aa1.56□□□□□ -2.16
USH2A-203ENST00000463147 Q8TAT8 98 aa1.56□□□□□ -2.16
USH2A-203ENST00000463147 C4orf3Q8WVX3 66 aa1.56□□□□□ -2.16
USH2A-203ENST00000463147 CYSTM1Q9H1C7 97 aa1.56□□□□□ -2.16
USH2A-203ENST00000463147 PROK2Q9HC23 129 aa1.56□□□□□ -2.16
USH2A-203ENST00000463147 CDC42SE1Q9NRR8 79 aa1.56□□□□□ -2.16
USH2A-203ENST00000463147 TMEM14BQ9NUH8 114 aa1.56□□□□□ -2.16
USH2A-203ENST00000463147 TMEM14CQ9P0S9 112 aa1.56□□□□□ -2.16
USH2A-203ENST00000463147 Q9Y3F1 56 aa1.56□□□□□ -2.16
USH2A-203ENST00000463147 CACNA1CQ13936 2221 aa1.56□□□□□ -2.16
USH2A-203ENST00000463147 POLEQ07864 2286 aa1.56□□□□□ -2.16
USH2A-203ENST00000463147 GOLGA4Q13439 2230 aaKnown RBP1.55□□□□□ -2.16
USH2A-203ENST00000463147 IGKV3D-7A0A0C4DH55 119 aa1.55□□□□□ -2.16
USH2A-203ENST00000463147 PPP1R17O96001 155 aa1.55□□□□□ -2.16
USH2A-203ENST00000463147 CCKP06307 115 aa1.55□□□□□ -2.16
USH2A-203ENST00000463147 FAM223AQ8IWN6 122 aa1.55□□□□□ -2.16
USH2A-203ENST00000463147 DYNLRB2Q8TF09 96 aa1.55□□□□□ -2.16
USH2A-203ENST00000463147 TMEM141Q96I45 108 aa1.55□□□□□ -2.16
USH2A-203ENST00000463147 SMIM2Q9BVW6 85 aa1.55□□□□□ -2.16
USH2A-203ENST00000463147 TRAV23DV6A0A075B6W5 121 aa1.54□□□□□ -2.16
USH2A-203ENST00000463147 TRAV13-2A0A0B4J235 113 aa1.54□□□□□ -2.16
USH2A-203ENST00000463147 TRAV12-3A0A0B4J271 114 aa1.54□□□□□ -2.16
USH2A-203ENST00000463147 TRBV10-3A0A0K0K1G6 114 aa1.54□□□□□ -2.16
USH2A-203ENST00000463147 F8WEM9 126 aa1.54□□□□□ -2.16
USH2A-203ENST00000463147 H7BZZ5 65 aa1.54□□□□□ -2.16
USH2A-203ENST00000463147 I3L3M4 83 aa1.54□□□□□ -2.16
USH2A-203ENST00000463147 M0R1W7 72 aa1.54□□□□□ -2.16
USH2A-203ENST00000463147 KLKP1Q107X0 134 aa1.54□□□□□ -2.16
USH2A-203ENST00000463147 DEFB110Q30KQ9 67 aa1.54□□□□□ -2.16
USH2A-203ENST00000463147 KRTAP26-1Q6PEX3 210 aa1.54□□□□□ -2.16
USH2A-203ENST00000463147 CNFNQ9BYD5 112 aa1.54□□□□□ -2.16
USH2A-203ENST00000463147 ORMDL1Q9P0S3 153 aa1.54□□□□□ -2.16
USH2A-203ENST00000463147 LINC00474Q9P2X8 69 aa1.54□□□□□ -2.16
USH2A-203ENST00000463147 UBE2D4Q9Y2X8 147 aa1.54□□□□□ -2.16
USH2A-203ENST00000463147 A0A087WSZ3 146 aa1.53□□□□□ -2.16
USH2A-203ENST00000463147 A0A087WVE0 104 aa1.53□□□□□ -2.16
USH2A-203ENST00000463147 IGLV3-32A0A0A0MS00 114 aa1.53□□□□□ -2.16
USH2A-203ENST00000463147 DEFB108AA8MXU0 73 aa1.53□□□□□ -2.16
USH2A-203ENST00000463147 CRIP1P50238 77 aa1.53□□□□□ -2.16
USH2A-203ENST00000463147 RPL39P5Q59GN2 51 aa1.53□□□□□ -2.16
USH2A-203ENST00000463147 SPANXN1Q5VSR9 72 aa1.53□□□□□ -2.16
USH2A-203ENST00000463147 LYPD5Q6UWN5 251 aa1.53□□□□□ -2.16
USH2A-203ENST00000463147 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP1.53□□□□□ -2.16
USH2A-203ENST00000463147 ZNF833PQ6ZTB9 187 aa1.53□□□□□ -2.16
USH2A-203ENST00000463147 CCL4L1Q8NHW4 92 aa1.53□□□□□ -2.16
USH2A-203ENST00000463147 UBL5Q9BZL1 73 aa1.53□□□□□ -2.16
USH2A-203ENST00000463147 NDUFA4L2Q9NRX3 87 aa1.53□□□□□ -2.16
USH2A-203ENST00000463147 SNURFQ9Y675 71 aa1.53□□□□□ -2.16
USH2A-203ENST00000463147 TET1Q8NFU7 2136 aa1.52□□□□□ -2.17
USH2A-203ENST00000463147 HEATR1Q9H583 2144 aaKnown RBP1.52□□□□□ -2.17
USH2A-203ENST00000463147 MIR22HGQ0VDD5 57 aa1.52□□□□□ -2.17
USH2A-203ENST00000463147 VMO1Q7Z5L0 202 aa1.52□□□□□ -2.17
USH2A-203ENST00000463147 TMEM167AQ8TBQ9 72 aa1.52□□□□□ -2.17
USH2A-203ENST00000463147 AMELXQ99217 191 aa1.52□□□□□ -2.17
USH2A-203ENST00000463147 LINC00846Q9NV44 126 aa1.52□□□□□ -2.17
USH2A-203ENST00000463147 SNRNP200O75643 2136 aaKnown RBP1.52□□□□□ -2.17
USH2A-203ENST00000463147 MUC22E2RYF6 1773 aaPredicted RBP1.52□□□□□ -2.17
USH2A-203ENST00000463147 COL4A6Q14031 1691 aa1.51□□□□□ -2.17
USH2A-203ENST00000463147 SORL1Q92673 2214 aa1.51□□□□□ -2.17
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms