RNA–Protein interactions for RNA: ENST00000462731.1

SGCE-209, Transcript of sarcoglycan epsilon, humanhuman

TSL 2

Gene SGCE, Length 351 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCE-209ENST00000462731 COL4A1P02462 1669 aa2.97□□□□□ -1.93
SGCE-209ENST00000462731 PIK3C2BO00750 1634 aa2.97□□□□□ -1.93
SGCE-209ENST00000462731 NDUFB1O75438 58 aa2.96□□□□□ -1.94
SGCE-209ENST00000462731 HMGA1P17096 107 aaKnown RBP2.96□□□□□ -1.94
SGCE-209ENST00000462731 S100A3P33764 101 aa2.96□□□□□ -1.94
SGCE-209ENST00000462731 SPINK7P58062 85 aa2.96□□□□□ -1.94
SGCE-209ENST00000462731 KRTAP10-12P60413 245 aa2.96□□□□□ -1.94
SGCE-209ENST00000462731 LRRC7Q96NW7 1537 aa2.96□□□□□ -1.94
SGCE-209ENST00000462731 NUP188Q5SRE5 1749 aa2.96□□□□□ -1.94
SGCE-209ENST00000462731 XRN1Q8IZH2 1706 aaKnown RBP2.96□□□□□ -1.94
SGCE-209ENST00000462731 MAP2P11137 1827 aaKnown RBP2.96□□□□□ -1.94
SGCE-209ENST00000462731 PCNTO95613 3336 aa2.95□□□□□ -1.94
SGCE-209ENST00000462731 RNF17Q9BXT8 1623 aaKnown RBP2.95□□□□□ -1.94
SGCE-209ENST00000462731 KRTAP13-4Q3LI77 160 aa2.95□□□□□ -1.94
SGCE-209ENST00000462731 LCE3CQ5T5A8 94 aa2.95□□□□□ -1.94
SGCE-209ENST00000462731 PKD1L2Q7Z442 2459 aa2.95□□□□□ -1.94
SGCE-209ENST00000462731 ANKRD50Q9ULJ7 1429 aa2.94□□□□□ -1.94
SGCE-209ENST00000462731 ZNF236Q9UL36 1845 aa2.94□□□□□ -1.94
SGCE-209ENST00000462731 IFT172Q9UG01 1749 aa2.93□□□□□ -1.94
SGCE-209ENST00000462731 PLCH1Q4KWH8 1693 aa2.93□□□□□ -1.94
SGCE-209ENST00000462731 IFI6P09912 130 aa2.93□□□□□ -1.94
SGCE-209ENST00000462731 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa2.93□□□□□ -1.94
SGCE-209ENST00000462731 ANKRD36A6QL64 1941 aa2.93□□□□□ -1.94
SGCE-209ENST00000462731 USP32Q8NFA0 1604 aa2.93□□□□□ -1.94
SGCE-209ENST00000462731 PRXQ9BXM0 1461 aa2.92□□□□□ -1.94
SGCE-209ENST00000462731 A0A096LNT2 108 aa2.92□□□□□ -1.94
SGCE-209ENST00000462731 C10orf113Q5VZT2 155 aa2.92□□□□□ -1.94
SGCE-209ENST00000462731 INTS1Q8N201 2190 aaKnown RBP2.92□□□□□ -1.94
SGCE-209ENST00000462731 NCOA6Q14686 2063 aaPredicted RBP2.92□□□□□ -1.94
SGCE-209ENST00000462731 KIAA0586Q9BVV6 1533 aa2.92□□□□□ -1.94
SGCE-209ENST00000462731 MYO7AQ13402 2215 aa2.92□□□□□ -1.94
SGCE-209ENST00000462731 DIP2AQ14689 1571 aa2.91□□□□□ -1.94
SGCE-209ENST00000462731 PAPPAQ13219 1627 aa2.91□□□□□ -1.94
SGCE-209ENST00000462731 A0A0D9SFI3 127 aa2.91□□□□□ -1.94
SGCE-209ENST00000462731 TRBV30A0A0K0K1B3 111 aa2.91□□□□□ -1.94
SGCE-209ENST00000462731 A0A1B0GVY2 172 aa2.91□□□□□ -1.94
SGCE-209ENST00000462731 J3QRE1 110 aa2.91□□□□□ -1.94
SGCE-209ENST00000462731 PLAC4Q8WY50 150 aa2.91□□□□□ -1.94
SGCE-209ENST00000462731 MED13LQ71F56 2210 aa2.91□□□□□ -1.94
SGCE-209ENST00000462731 LRP6O75581 1613 aa2.9□□□□□ -1.94
SGCE-209ENST00000462731 NHSQ6T4R5 1651 aa2.9□□□□□ -1.95
SGCE-209ENST00000462731 TRAV21A0A0B4J279 112 aa2.89□□□□□ -1.95
SGCE-209ENST00000462731 SAMD9Q5K651 1589 aa2.89□□□□□ -1.95
SGCE-209ENST00000462731 SMIM11BQ8TCY0 68 aa2.89□□□□□ -1.95
SGCE-209ENST00000462731 FAM103A1Q9BTL3 118 aaKnown RBP2.89□□□□□ -1.95
SGCE-209ENST00000462731 MAST1Q9Y2H9 1570 aa2.89□□□□□ -1.95
SGCE-209ENST00000462731 TNRC18O15417 2968 aaPredicted RBP2.89□□□□□ -1.95
SGCE-209ENST00000462731 C5P01031 1676 aa2.88□□□□□ -1.95
SGCE-209ENST00000462731 KRTAP12-2P59991 146 aa2.88□□□□□ -1.95
SGCE-209ENST00000462731 KRTAP10-1P60331 282 aa2.88□□□□□ -1.95
SGCE-209ENST00000462731 KRTAP10-3P60369 221 aa2.88□□□□□ -1.95
SGCE-209ENST00000462731 DEFB103AP81534 67 aa2.88□□□□□ -1.95
SGCE-209ENST00000462731 Q6ZRX8 168 aa2.88□□□□□ -1.95
SGCE-209ENST00000462731 LRRC37A2A6NM11 1700 aa2.88□□□□□ -1.95
SGCE-209ENST00000462731 PKD1L3Q7Z443 1732 aa2.88□□□□□ -1.95
SGCE-209ENST00000462731 CACNA1GO43497 2377 aa2.87□□□□□ -1.95
SGCE-209ENST00000462731 CICQ96RK0 1608 aaPredicted RBP2.87□□□□□ -1.95
SGCE-209ENST00000462731 LINC00575Q6W349 94 aa2.87□□□□□ -1.95
SGCE-209ENST00000462731 ALS2Q96Q42 1657 aa2.87□□□□□ -1.95
SGCE-209ENST00000462731 ITSN2Q9NZM3 1697 aa2.87□□□□□ -1.95
SGCE-209ENST00000462731 GVQW2A0A096LPI5 108 aaPredicted RBP2.86□□□□□ -1.95
SGCE-209ENST00000462731 LCE6AA0A183 80 aa2.86□□□□□ -1.95
SGCE-209ENST00000462731 SNRPGP15A8MWD9 76 aa2.86□□□□□ -1.95
SGCE-209ENST00000462731 NREPQ16612 68 aa2.86□□□□□ -1.95
SGCE-209ENST00000462731 SPINK13Q1W4C9 94 aa2.86□□□□□ -1.95
SGCE-209ENST00000462731 TRBV6-1A0A0K0K1D8 114 aa2.85□□□□□ -1.95
SGCE-209ENST00000462731 BRD3OSQ6XYD6 125 aa2.85□□□□□ -1.95
SGCE-209ENST00000462731 VWDEQ8N2E2 1590 aa2.85□□□□□ -1.95
SGCE-209ENST00000462731 WIZO95785 1651 aa2.85□□□□□ -1.95
SGCE-209ENST00000462731 GOLGB1Q14789 3259 aaKnown RBP2.84□□□□□ -1.95
SGCE-209ENST00000462731 G3V318 75 aa2.84□□□□□ -1.95
SGCE-209ENST00000462731 PIN1P1O15428 100 aa2.84□□□□□ -1.95
SGCE-209ENST00000462731 PRB2P02812 416 aaPredicted RBP2.84□□□□□ -1.95
SGCE-209ENST00000462731 CPS1P31327 1500 aa2.83□□□□□ -1.96
SGCE-209ENST00000462731 LINC01549A6NIU2 74 aa2.83□□□□□ -1.96
SGCE-209ENST00000462731 NCR3O14931 201 aa2.83□□□□□ -1.96
SGCE-209ENST00000462731 UBR3Q6ZT12 1888 aa2.83□□□□□ -1.96
SGCE-209ENST00000462731 MROH2AA6NES4 1674 aa2.82□□□□□ -1.96
SGCE-209ENST00000462731 C3P01024 1663 aa2.82□□□□□ -1.96
SGCE-209ENST00000462731 POLR1AO95602 1720 aaPredicted RBP2.82□□□□□ -1.96
SGCE-209ENST00000462731 TIAM2Q8IVF5 1701 aa2.82□□□□□ -1.96
SGCE-209ENST00000462731 DEFB112Q30KQ8 113 aa2.82□□□□□ -1.96
SGCE-209ENST00000462731 WFDC9Q8NEX5 89 aa2.82□□□□□ -1.96
SGCE-209ENST00000462731 FXYD6Q9H0Q3 95 aa2.82□□□□□ -1.96
SGCE-209ENST00000462731 SYCP2Q9BX26 1530 aa2.82□□□□□ -1.96
SGCE-209ENST00000462731 NWD1Q149M9 1564 aa2.82□□□□□ -1.96
SGCE-209ENST00000462731 E9PCH4 1651 aa2.82□□□□□ -1.96
SGCE-209ENST00000462731 ZNF831Q5JPB2 1677 aa2.82□□□□□ -1.96
SGCE-209ENST00000462731 PARP4Q9UKK3 1724 aaKnown RBP2.82□□□□□ -1.96
SGCE-209ENST00000462731 A0A0C4DFX4 3053 aa2.81□□□□□ -1.96
SGCE-209ENST00000462731 A0A1B0GU69 56 aa2.81□□□□□ -1.96
SGCE-209ENST00000462731 PCOTHQ58A44 107 aa2.81□□□□□ -1.96
SGCE-209ENST00000462731 GAFA1Q96PS6 74 aa2.81□□□□□ -1.96
SGCE-209ENST00000462731 ABCA1O95477 2261 aa2.81□□□□□ -1.96
SGCE-209ENST00000462731 KMT2BQ9UMN6 2715 aaPredicted RBP2.81□□□□□ -1.96
SGCE-209ENST00000462731 ZFHX3Q15911 3703 aa2.8□□□□□ -1.96
SGCE-209ENST00000462731 LAMC1P11047 1609 aa2.8□□□□□ -1.96
SGCE-209ENST00000462731 EIF2AK4Q9P2K8 1649 aaKnown RBP2.8□□□□□ -1.96
SGCE-209ENST00000462731 MROH2BQ7Z745 1585 aa2.8□□□□□ -1.96
SGCE-209ENST00000462731 LINC00959A0A1B0GUT2 108 aa2.8□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 193.4 ms