RNA–Protein interactions for RNA: ENST00000462553.2

CDC42BPA-210, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 5

Gene CDC42BPA, Length 430 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-210ENST00000462553 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP4.94□□□□□ -1.62
CDC42BPA-210ENST00000462553 APOMO95445 188 aa4.94□□□□□ -1.62
CDC42BPA-210ENST00000462553 C10orf25Q5T742 122 aa4.94□□□□□ -1.62
CDC42BPA-210ENST00000462553 CBLN2Q8IUK8 224 aa4.94□□□□□ -1.62
CDC42BPA-210ENST00000462553 C2orf88Q9BSF0 95 aa4.94□□□□□ -1.62
CDC42BPA-210ENST00000462553 TRAPPC1Q9Y5R8 145 aa4.94□□□□□ -1.62
CDC42BPA-210ENST00000462553 A0A0J9YXV3 536 aa4.93□□□□□ -1.62
CDC42BPA-210ENST00000462553 TMEM238LA0A1B0GVL6 79 aa4.93□□□□□ -1.62
CDC42BPA-210ENST00000462553 MAJINQ3KP22 176 aa4.93□□□□□ -1.62
CDC42BPA-210ENST00000462553 KRTAP5-3Q6L8H2 238 aa4.93□□□□□ -1.62
CDC42BPA-210ENST00000462553 Q6ZN92 141 aa4.93□□□□□ -1.62
CDC42BPA-210ENST00000462553 FA2HQ7L5A8 372 aa4.93□□□□□ -1.62
CDC42BPA-210ENST00000462553 ERASQ7Z444 233 aa4.93□□□□□ -1.62
CDC42BPA-210ENST00000462553 LINC01561Q8N1V8 128 aa4.93□□□□□ -1.62
CDC42BPA-210ENST00000462553 CAMK2N2Q96S95 79 aa4.93□□□□□ -1.62
CDC42BPA-210ENST00000462553 KRTAP9-3Q9BYQ3 159 aa4.93□□□□□ -1.62
CDC42BPA-210ENST00000462553 VCX2Q9H322 139 aa4.93□□□□□ -1.62
CDC42BPA-210ENST00000462553 MRPL35Q9NZE8 188 aaKnown RBP4.93□□□□□ -1.62
CDC42BPA-210ENST00000462553 LOC107984640A0A0U1RRK4 108 aa4.92□□□□□ -1.62
CDC42BPA-210ENST00000462553 G0S2P27469 103 aa4.92□□□□□ -1.62
CDC42BPA-210ENST00000462553 PTTG1IPP53801 180 aa4.92□□□□□ -1.62
CDC42BPA-210ENST00000462553 KRTAP10-8P60410 259 aa4.92□□□□□ -1.62
CDC42BPA-210ENST00000462553 RNF151Q2KHN1 245 aa4.92□□□□□ -1.62
CDC42BPA-210ENST00000462553 UNQ6190/PRO20217Q6UXQ8 127 aa4.92□□□□□ -1.62
CDC42BPA-210ENST00000462553 STPG4Q8N801 248 aa4.92□□□□□ -1.62
CDC42BPA-210ENST00000462553 C7orf33Q8WU49 177 aa4.92□□□□□ -1.62
CDC42BPA-210ENST00000462553 SCGB3A1Q96QR1 104 aa4.92□□□□□ -1.62
CDC42BPA-210ENST00000462553 C6orf48Q9UBA6 75 aa4.92□□□□□ -1.62
CDC42BPA-210ENST00000462553 MUC2Q02817 5179 aa4.92□□□□□ -1.62
CDC42BPA-210ENST00000462553 IGLV5-45A0A087WSX0 123 aa4.91□□□□□ -1.62
CDC42BPA-210ENST00000462553 F8WDY8 70 aa4.91□□□□□ -1.62
CDC42BPA-210ENST00000462553 PAPPA-AS1Q5QFB9 102 aa4.91□□□□□ -1.62
CDC42BPA-210ENST00000462553 SMCO4Q9NRQ5 59 aa4.91□□□□□ -1.62
CDC42BPA-210ENST00000462553 CDKN2A-AS1Q9UH64 79 aa4.91□□□□□ -1.62
CDC42BPA-210ENST00000462553 A0A1W2PNN7 141 aa4.9□□□□□ -1.63
CDC42BPA-210ENST00000462553 LINC01549A6NIU2 74 aa4.9□□□□□ -1.63
CDC42BPA-210ENST00000462553 NDUFA1O15239 70 aa4.9□□□□□ -1.63
CDC42BPA-210ENST00000462553 LINC00614P0C842 121 aa4.9□□□□□ -1.63
CDC42BPA-210ENST00000462553 TLX1NBP0CAT3 122 aa4.9□□□□□ -1.63
CDC42BPA-210ENST00000462553 HERVK_113P63121 156 aa4.9□□□□□ -1.63
CDC42BPA-210ENST00000462553 GAGE2BQ13066 116 aa4.9□□□□□ -1.63
CDC42BPA-210ENST00000462553 PMCHL1Q16048 86 aa4.9□□□□□ -1.63
CDC42BPA-210ENST00000462553 PDZD11Q5EBL8 140 aa4.9□□□□□ -1.63
CDC42BPA-210ENST00000462553 C2orf82Q6UX34 121 aa4.9□□□□□ -1.63
CDC42BPA-210ENST00000462553 DPH3Q96FX2 82 aa4.9□□□□□ -1.63
CDC42BPA-210ENST00000462553 PKIGQ9Y2B9 76 aa4.9□□□□□ -1.63
CDC42BPA-210ENST00000462553 TINCRA0A1B0GVN0 87 aa4.89□□□□□ -1.63
CDC42BPA-210ENST00000462553 SMIM1B2RUZ4 78 aa4.89□□□□□ -1.63
CDC42BPA-210ENST00000462553 HBDP02042 147 aa4.89□□□□□ -1.63
CDC42BPA-210ENST00000462553 RPL18AQ02543 176 aaKnown RBP4.89□□□□□ -1.63
CDC42BPA-210ENST00000462553 PMVKQ15126 192 aa4.89□□□□□ -1.63
CDC42BPA-210ENST00000462553 Q6ZRP5 223 aa4.89□□□□□ -1.63
CDC42BPA-210ENST00000462553 Q8IZM0 81 aa4.89□□□□□ -1.63
CDC42BPA-210ENST00000462553 CST9LQ9H4G1 147 aa4.89□□□□□ -1.63
CDC42BPA-210ENST00000462553 LINC00474Q9P2X8 69 aa4.89□□□□□ -1.63
CDC42BPA-210ENST00000462553 TRBV30A0A0K0K1B3 111 aa4.88□□□□□ -1.63
CDC42BPA-210ENST00000462553 IGLC3P0DOY3 106 aa4.88□□□□□ -1.63
CDC42BPA-210ENST00000462553 LINC00310P59036 64 aa4.88□□□□□ -1.63
CDC42BPA-210ENST00000462553 SEC11AP67812 179 aa4.88□□□□□ -1.63
CDC42BPA-210ENST00000462553 SRSF9Q13242 221 aaKnown RBP eCLIP4.88□□□□□ -1.63
CDC42BPA-210ENST00000462553 C9orf116Q5BN46 136 aaPredicted RBP4.88□□□□□ -1.63
CDC42BPA-210ENST00000462553 SPINK6Q6UWN8 80 aa4.88□□□□□ -1.63
CDC42BPA-210ENST00000462553 KRTAP7-1Q8IUC3 87 aa4.88□□□□□ -1.63
CDC42BPA-210ENST00000462553 LINC00469Q8N7U9 141 aa4.88□□□□□ -1.63
CDC42BPA-210ENST00000462553 GEMIN7Q9H840 131 aaKnown RBP4.88□□□□□ -1.63
CDC42BPA-210ENST00000462553 FAM168BA1KXE4 195 aa4.87□□□□□ -1.63
CDC42BPA-210ENST00000462553 COLCA2A8K830 154 aa4.87□□□□□ -1.63
CDC42BPA-210ENST00000462553 RAB5BP61020 215 aa4.87□□□□□ -1.63
CDC42BPA-210ENST00000462553 TOMM7Q9P0U1 55 aa4.87□□□□□ -1.63
CDC42BPA-210ENST00000462553 NDUFC2-KCTD14E9PQ53 114 aa4.86□□□□□ -1.63
CDC42BPA-210ENST00000462553 TRGC2P03986 189 aa4.86□□□□□ -1.63
CDC42BPA-210ENST00000462553 SPINK8P0C7L1 97 aa4.86□□□□□ -1.63
CDC42BPA-210ENST00000462553 ZNF22P17026 224 aaPredicted RBP4.86□□□□□ -1.63
CDC42BPA-210ENST00000462553 C9orf129Q5T035 196 aaKnown RBP4.86□□□□□ -1.63
CDC42BPA-210ENST00000462553 REG3GQ6UW15 175 aa4.86□□□□□ -1.63
CDC42BPA-210ENST00000462553 CHCHD1Q96BP2 118 aaKnown RBP4.86□□□□□ -1.63
CDC42BPA-210ENST00000462553 PACRGQ96M98 296 aaPredicted RBP4.86□□□□□ -1.63
CDC42BPA-210ENST00000462553 IGLV5-39A0A0G2JS06 123 aa4.85□□□□□ -1.63
CDC42BPA-210ENST00000462553 C11orf86A6NJI1 115 aa4.85□□□□□ -1.63
CDC42BPA-210ENST00000462553 SCO1O75880 301 aa4.85□□□□□ -1.63
CDC42BPA-210ENST00000462553 ATP5LO75964 103 aa4.85□□□□□ -1.63
CDC42BPA-210ENST00000462553 PRSS2P07478 247 aa4.85□□□□□ -1.63
CDC42BPA-210ENST00000462553 GAGE2EQ4V326 116 aa4.85□□□□□ -1.63
CDC42BPA-210ENST00000462553 PHF5AQ7RTV0 110 aaKnown RBP4.85□□□□□ -1.63
CDC42BPA-210ENST00000462553 KRTAP11-1Q8IUC1 163 aa4.85□□□□□ -1.63
CDC42BPA-210ENST00000462553 COX7B2Q8TF08 81 aa4.85□□□□□ -1.63
CDC42BPA-210ENST00000462553 GAGE2DQ9UEU5 116 aa4.85□□□□□ -1.63
CDC42BPA-210ENST00000462553 F8VRH5 84 aa4.84□□□□□ -1.63
CDC42BPA-210ENST00000462553 CXCL5P42830 114 aa4.84□□□□□ -1.63
CDC42BPA-210ENST00000462553 C6orf226Q5I0X4 101 aa4.84□□□□□ -1.63
CDC42BPA-210ENST00000462553 TRAV12-1A0A0B4J245 112 aa4.83□□□□□ -1.64
CDC42BPA-210ENST00000462553 NUPR1O60356 82 aa4.83□□□□□ -1.64
CDC42BPA-210ENST00000462553 SERF1AO75920 110 aa4.83□□□□□ -1.64
CDC42BPA-210ENST00000462553 NDUFA6P56556 154 aa4.83□□□□□ -1.64
CDC42BPA-210ENST00000462553 CKS1BP61024 79 aa4.83□□□□□ -1.64
CDC42BPA-210ENST00000462553 FAM19A5Q7Z5A7 132 aaPredicted RBP4.83□□□□□ -1.64
CDC42BPA-210ENST00000462553 FAM19A2Q8N3H0 131 aa4.83□□□□□ -1.64
CDC42BPA-210ENST00000462553 IFI27L1Q96BM0 104 aa4.83□□□□□ -1.64
CDC42BPA-210ENST00000462553 PSORS1C2Q9UIG4 136 aa4.83□□□□□ -1.64
CDC42BPA-210ENST00000462553 FAT4Q6V0I7 4981 aa4.82□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 106.9 ms