RNA–Protein interactions for RNA: ENST00000462198.5

SMARCC1-204, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 1, humanhuman

TSL 2

Gene SMARCC1, Length 785 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC1-204ENST00000462198 FAM104BQ5XKR9 115 aa4.25□□□□□ -1.73
SMARCC1-204ENST00000462198 SUMO4Q6EEV6 95 aa4.25□□□□□ -1.73
SMARCC1-204ENST00000462198 C9orf47Q6ZRZ4 202 aa4.25□□□□□ -1.73
SMARCC1-204ENST00000462198 ORMDL3Q8N138 153 aa4.25□□□□□ -1.73
SMARCC1-204ENST00000462198 SERP2Q8N6R1 65 aa4.25□□□□□ -1.73
SMARCC1-204ENST00000462198 TMEM75Q8N9X5 138 aa4.25□□□□□ -1.73
SMARCC1-204ENST00000462198 C11orf45Q8TAV5 145 aa4.25□□□□□ -1.73
SMARCC1-204ENST00000462198 NTN5Q8WTR8 489 aaPredicted RBP4.25□□□□□ -1.73
SMARCC1-204ENST00000462198 CNFNQ9BYD5 112 aa4.25□□□□□ -1.73
SMARCC1-204ENST00000462198 NXT2Q9NPJ8 142 aaKnown RBP4.25□□□□□ -1.73
SMARCC1-204ENST00000462198 PKIGQ9Y2B9 76 aa4.25□□□□□ -1.73
SMARCC1-204ENST00000462198 IGHV3OR16-12A0A075B7B8 117 aa4.24□□□□□ -1.73
SMARCC1-204ENST00000462198 FAM236DA0A1B0GTK5 79 aa4.24□□□□□ -1.73
SMARCC1-204ENST00000462198 A8MTW9 85 aa4.24□□□□□ -1.73
SMARCC1-204ENST00000462198 INSP01308 110 aa4.24□□□□□ -1.73
SMARCC1-204ENST00000462198 GIG44P09565 113 aaPredicted RBP4.24□□□□□ -1.73
SMARCC1-204ENST00000462198 ARMS2P0C7Q2 107 aa4.24□□□□□ -1.73
SMARCC1-204ENST00000462198 FAM236CP0DP71 79 aa4.24□□□□□ -1.73
SMARCC1-204ENST00000462198 IFI27P40305 119 aaPredicted RBP4.24□□□□□ -1.73
SMARCC1-204ENST00000462198 CRIP1P50238 77 aa4.24□□□□□ -1.73
SMARCC1-204ENST00000462198 ZC2HC1BQ5TFG8 222 aa4.24□□□□□ -1.73
SMARCC1-204ENST00000462198 C5orf38Q86SI9 138 aa4.24□□□□□ -1.73
SMARCC1-204ENST00000462198 MSRB1Q9NZV6 116 aa4.24□□□□□ -1.73
SMARCC1-204ENST00000462198 LRP1BQ9NZR2 4599 aa4.23□□□□□ -1.73
SMARCC1-204ENST00000462198 MYCBP2O75592 4640 aa4.23□□□□□ -1.73
SMARCC1-204ENST00000462198 TRAV12-1A0A0B4J245 112 aa4.23□□□□□ -1.73
SMARCC1-204ENST00000462198 RNASE4P34096 147 aaKnown RBP4.23□□□□□ -1.73
SMARCC1-204ENST00000462198 SEC61BP60468 96 aaKnown RBP4.23□□□□□ -1.73
SMARCC1-204ENST00000462198 RPL18AQ02543 176 aaKnown RBP4.23□□□□□ -1.73
SMARCC1-204ENST00000462198 LINC01620Q4KN68 170 aa4.23□□□□□ -1.73
SMARCC1-204ENST00000462198 CSNK1G2-AS1Q8NCQ2 148 aa4.23□□□□□ -1.73
SMARCC1-204ENST00000462198 Q8TAT8 98 aa4.23□□□□□ -1.73
SMARCC1-204ENST00000462198 C2orf48Q96LS8 159 aa4.23□□□□□ -1.73
SMARCC1-204ENST00000462198 Q9H8V8 135 aa4.23□□□□□ -1.73
SMARCC1-204ENST00000462198 PRO1854Q9UHT4 67 aa4.23□□□□□ -1.73
SMARCC1-204ENST00000462198 IGKV2D-26A0A0A0MRZ7 120 aa4.22□□□□□ -1.73
SMARCC1-204ENST00000462198 TRAV16A0A0A6YYK6 109 aaPredicted RBP4.22□□□□□ -1.73
SMARCC1-204ENST00000462198 TRAV12-3A0A0B4J271 114 aa4.22□□□□□ -1.73
SMARCC1-204ENST00000462198 A0A0B4J2C4 111 aa4.22□□□□□ -1.73
SMARCC1-204ENST00000462198 HTN1P15515 57 aa4.22□□□□□ -1.73
SMARCC1-204ENST00000462198 HERVK_113P61574 105 aa4.22□□□□□ -1.73
SMARCC1-204ENST00000462198 MRPL51Q4U2R6 128 aaKnown RBP4.22□□□□□ -1.73
SMARCC1-204ENST00000462198 Q6ZR54 194 aa4.22□□□□□ -1.73
SMARCC1-204ENST00000462198 FAM19A1Q7Z5A9 133 aa4.22□□□□□ -1.73
SMARCC1-204ENST00000462198 PRNTQ86SH4 94 aa4.22□□□□□ -1.73
SMARCC1-204ENST00000462198 DNAH5Q8TE73 4624 aa4.22□□□□□ -1.73
SMARCC1-204ENST00000462198 IGLV2-18A0A075B6J9 118 aa4.21□□□□□ -1.74
SMARCC1-204ENST00000462198 IGHV4-4A0A075B6R2 117 aa4.21□□□□□ -1.74
SMARCC1-204ENST00000462198 TMSB15BA0A087X1C1 80 aa4.21□□□□□ -1.74
SMARCC1-204ENST00000462198 hADV29S1A0JD25 119 aa4.21□□□□□ -1.74
SMARCC1-204ENST00000462198 KLLNB2CW77 178 aa4.21□□□□□ -1.74
SMARCC1-204ENST00000462198 D6R8Y8 96 aa4.21□□□□□ -1.74
SMARCC1-204ENST00000462198 DEFB4AO15263 64 aa4.21□□□□□ -1.74
SMARCC1-204ENST00000462198 PRSS1P07477 247 aa4.21□□□□□ -1.74
SMARCC1-204ENST00000462198 COX6CP09669 75 aa4.21□□□□□ -1.74
SMARCC1-204ENST00000462198 MIFP14174 115 aa4.21□□□□□ -1.74
SMARCC1-204ENST00000462198 SRSF9Q13242 221 aaKnown RBP eCLIP4.21□□□□□ -1.74
SMARCC1-204ENST00000462198 PMAIP1Q13794 54 aa4.21□□□□□ -1.74
SMARCC1-204ENST00000462198 PAPPA-AS1Q5QFB9 102 aa4.21□□□□□ -1.74
SMARCC1-204ENST00000462198 C1orf134Q5TEV5 83 aa4.21□□□□□ -1.74
SMARCC1-204ENST00000462198 C2orf82Q6UX34 121 aa4.21□□□□□ -1.74
SMARCC1-204ENST00000462198 SDIM1Q6ZPB5 146 aa4.21□□□□□ -1.74
SMARCC1-204ENST00000462198 ZFAND2AQ8N6M9 145 aa4.21□□□□□ -1.74
SMARCC1-204ENST00000462198 DAND5Q8N907 189 aa4.21□□□□□ -1.74
SMARCC1-204ENST00000462198 RNF185Q96GF1 192 aa4.21□□□□□ -1.74
SMARCC1-204ENST00000462198 FAM19A4Q96LR4 140 aa4.21□□□□□ -1.74
SMARCC1-204ENST00000462198 DPH3P1Q9H4G8 78 aa4.21□□□□□ -1.74
SMARCC1-204ENST00000462198 TIMM8BQ9Y5J9 83 aaPredicted RBP4.21□□□□□ -1.74
SMARCC1-204ENST00000462198 LENEPQ9Y5L5 61 aa4.21□□□□□ -1.74
SMARCC1-204ENST00000462198 IGHV4-28A0A0C4DH34 117 aa4.2□□□□□ -1.74
SMARCC1-204ENST00000462198 TRBV30A0A0K0K1B3 111 aa4.2□□□□□ -1.74
SMARCC1-204ENST00000462198 A0A0U1RQV1 116 aa4.2□□□□□ -1.74
SMARCC1-204ENST00000462198 K7EMI3 77 aa4.2□□□□□ -1.74
SMARCC1-204ENST00000462198 BCE1O60756 84 aa4.2□□□□□ -1.74
SMARCC1-204ENST00000462198 LYZL1Q6UWQ5 148 aa4.2□□□□□ -1.74
SMARCC1-204ENST00000462198 ZFP2Q6ZN57 461 aa4.2□□□□□ -1.74
SMARCC1-204ENST00000462198 DSCR8Q96T75 97 aa4.2□□□□□ -1.74
SMARCC1-204ENST00000462198 TRAV21A0A0B4J279 112 aa4.19□□□□□ -1.74
SMARCC1-204ENST00000462198 F8VRH5 84 aa4.19□□□□□ -1.74
SMARCC1-204ENST00000462198 PRM2P04554 102 aa4.19□□□□□ -1.74
SMARCC1-204ENST00000462198 CFC1BP0CG36 223 aa4.19□□□□□ -1.74
SMARCC1-204ENST00000462198 CFC1P0CG37 223 aa4.19□□□□□ -1.74
SMARCC1-204ENST00000462198 PRR9Q5T870 116 aa4.19□□□□□ -1.74
SMARCC1-204ENST00000462198 SCGB1D4Q6XE38 83 aa4.19□□□□□ -1.74
SMARCC1-204ENST00000462198 Q8N8P6 123 aa4.19□□□□□ -1.74
SMARCC1-204ENST00000462198 Q8NAQ8 132 aa4.19□□□□□ -1.74
SMARCC1-204ENST00000462198 NEXN-AS1Q8NBZ9 246 aa4.19□□□□□ -1.74
SMARCC1-204ENST00000462198 VSIG2Q96IQ7 327 aa4.19□□□□□ -1.74
SMARCC1-204ENST00000462198 UPK3BQ9BT76 320 aa4.19□□□□□ -1.74
SMARCC1-204ENST00000462198 C11orf68Q9H3H3 251 aaKnown RBP4.19□□□□□ -1.74
SMARCC1-204ENST00000462198 VPS13BQ7Z7G8 4022 aa4.19□□□□□ -1.74
SMARCC1-204ENST00000462198 IGHV1OR15-1A0A075B7D0 117 aa4.18□□□□□ -1.74
SMARCC1-204ENST00000462198 NDUFC1O43677 76 aa4.18□□□□□ -1.74
SMARCC1-204ENST00000462198 SH2D1AO60880 128 aa4.18□□□□□ -1.74
SMARCC1-204ENST00000462198 OXTP01178 125 aa4.18□□□□□ -1.74
SMARCC1-204ENST00000462198 Q5VSD8 79 aa4.18□□□□□ -1.74
SMARCC1-204ENST00000462198 PRR15Q8IV56 129 aa4.18□□□□□ -1.74
SMARCC1-204ENST00000462198 TMEM263Q8WUH6 116 aaKnown RBP4.18□□□□□ -1.74
SMARCC1-204ENST00000462198 C16orf74Q96GX8 76 aa4.18□□□□□ -1.74
SMARCC1-204ENST00000462198 NACAE9PAV3 2078 aa4.17□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms