RNA–Protein interactions for RNA: ENST00000461654.1

TMEM39A-203, Transcript of transmembrane protein 39A, humanhuman

TSL 4

Gene TMEM39A, Length 588 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39A-203ENST00000461654 DDTP30046 118 aa10.1□□□□□ -0.79
TMEM39A-203ENST00000461654 CKS1BP61024 79 aa10.1□□□□□ -0.79
TMEM39A-203ENST00000461654 KRTAP1-5Q9BYS1 174 aa10.1□□□□□ -0.79
TMEM39A-203ENST00000461654 FAT2Q9NYQ8 4349 aa10.1□□□□□ -0.79
TMEM39A-203ENST00000461654 NDUFA1O15239 70 aa10.09□□□□□ -0.79
TMEM39A-203ENST00000461654 CXCL5P42830 114 aa10.09□□□□□ -0.79
TMEM39A-203ENST00000461654 HERV-K104P63124 156 aa10.09□□□□□ -0.79
TMEM39A-203ENST00000461654 SPAG11BQ08648 103 aa10.09□□□□□ -0.79
TMEM39A-203ENST00000461654 HECTD4Q9Y4D8 3996 aa10.09□□□□□ -0.79
TMEM39A-203ENST00000461654 ZNF561-AS1K7EIQ3 104 aa10.08□□□□□ -0.8
TMEM39A-203ENST00000461654 C6orf223Q8N319 242 aa10.08□□□□□ -0.8
TMEM39A-203ENST00000461654 DNAH17Q9UFH2 4485 aa10.07□□□□□ -0.8
TMEM39A-203ENST00000461654 CIRBPQ14011 172 aaKnown RBP10.07□□□□□ -0.8
TMEM39A-203ENST00000461654 HIGD1BQ9P298 99 aa10.07□□□□□ -0.8
TMEM39A-203ENST00000461654 HERC2O95714 4834 aa10.07□□□□□ -0.8
TMEM39A-203ENST00000461654 TP73-AS1Q9UF72 201 aa10.06□□□□□ -0.8
TMEM39A-203ENST00000461654 LINC00587B1AMM8 73 aa10.05□□□□□ -0.8
TMEM39A-203ENST00000461654 MEIG1Q5JSS6 88 aa10.05□□□□□ -0.8
TMEM39A-203ENST00000461654 ZNF625Q96I27 306 aaPredicted RBP10.05□□□□□ -0.8
TMEM39A-203ENST00000461654 A0A0J9YXY3 114 aa10.04□□□□□ -0.8
TMEM39A-203ENST00000461654 TMEM238C9JI98 176 aa10.04□□□□□ -0.8
TMEM39A-203ENST00000461654 F8WDY8 70 aa10.04□□□□□ -0.8
TMEM39A-203ENST00000461654 KIAA0087Q14695 138 aa10.04□□□□□ -0.8
TMEM39A-203ENST00000461654 C2orf91Q6ZV80 131 aa10.04□□□□□ -0.8
TMEM39A-203ENST00000461654 KIAA1109Q2LD37 5005 aa10.04□□□□□ -0.8
TMEM39A-203ENST00000461654 USP17L23D6RBM5 183 aa10.03□□□□□ -0.8
TMEM39A-203ENST00000461654 TNP2Q05952 138 aa10.03□□□□□ -0.8
TMEM39A-203ENST00000461654 HIGD2BQ4VC39 106 aa10.03□□□□□ -0.8
TMEM39A-203ENST00000461654 C15orf56Q8N910 161 aa10.03□□□□□ -0.8
TMEM39A-203ENST00000461654 GVQW2A0A096LPI5 108 aaPredicted RBP10.02□□□□□ -0.81
TMEM39A-203ENST00000461654 CTAG1AP78358 180 aa10.02□□□□□ -0.81
TMEM39A-203ENST00000461654 SRSF9Q13242 221 aaKnown RBP eCLIP10.02□□□□□ -0.81
TMEM39A-203ENST00000461654 C2orf82Q6UX34 121 aa10.02□□□□□ -0.81
TMEM39A-203ENST00000461654 NTN5Q8WTR8 489 aaPredicted RBP10.02□□□□□ -0.81
TMEM39A-203ENST00000461654 C2orf48Q96LS8 159 aa10.02□□□□□ -0.81
TMEM39A-203ENST00000461654 CAMK2N2Q96S95 79 aa10.02□□□□□ -0.81
TMEM39A-203ENST00000461654 HIST1H4GQ99525 98 aa10.02□□□□□ -0.81
TMEM39A-203ENST00000461654 TIMM17BO60830 172 aa10.01□□□□□ -0.81
TMEM39A-203ENST00000461654 HSD52Q0P140 79 aa10.01□□□□□ -0.81
TMEM39A-203ENST00000461654 C14orf177Q52M58 125 aa10.01□□□□□ -0.81
TMEM39A-203ENST00000461654 TAL2Q16559 108 aa10□□□□□ -0.81
TMEM39A-203ENST00000461654 LINC00526Q96FQ7 95 aa10□□□□□ -0.81
TMEM39A-203ENST00000461654 SPANXB1Q9NS25 103 aaPredicted RBP10□□□□□ -0.81
TMEM39A-203ENST00000461654 PKD1P98161 4303 aa10□□□□□ -0.81
TMEM39A-203ENST00000461654 GCSHP23434 173 aa9.99□□□□□ -0.81
TMEM39A-203ENST00000461654 Q6ZVH6 145 aa9.99□□□□□ -0.81
TMEM39A-203ENST00000461654 ERG28Q9UKR5 140 aa9.99□□□□□ -0.81
TMEM39A-203ENST00000461654 DNAH11Q96DT5 4516 aa9.98□□□□□ -0.81
TMEM39A-203ENST00000461654 M0R143 59 aa9.98□□□□□ -0.81
TMEM39A-203ENST00000461654 LECT2O14960 151 aa9.98□□□□□ -0.81
TMEM39A-203ENST00000461654 LINC00158P58513 81 aa9.98□□□□□ -0.81
TMEM39A-203ENST00000461654 UNQ6190/PRO20217Q6UXQ8 127 aa9.98□□□□□ -0.81
TMEM39A-203ENST00000461654 COPS9Q8WXC6 57 aa9.98□□□□□ -0.81
TMEM39A-203ENST00000461654 DYNC1H1Q14204 4646 aaKnown RBP9.98□□□□□ -0.81
TMEM39A-203ENST00000461654 TRBV30A0A0K0K1B3 111 aa9.97□□□□□ -0.81
TMEM39A-203ENST00000461654 A0A0U1RRA0 63 aa9.97□□□□□ -0.81
TMEM39A-203ENST00000461654 SMIM13P0DJ93 91 aa9.97□□□□□ -0.81
TMEM39A-203ENST00000461654 PFN2P35080 140 aa9.97□□□□□ -0.81
TMEM39A-203ENST00000461654 SYCNQ0VAF6 134 aa9.97□□□□□ -0.81
TMEM39A-203ENST00000461654 COX17Q14061 63 aa9.97□□□□□ -0.81
TMEM39A-203ENST00000461654 PKHD1P08F94 4074 aa9.96□□□□□ -0.81
TMEM39A-203ENST00000461654 Q6ZRN7 208 aaPredicted RBP9.96□□□□□ -0.82
TMEM39A-203ENST00000461654 SPANXDQ9BXN6 97 aa9.96□□□□□ -0.82
TMEM39A-203ENST00000461654 SPANXCQ9NY87 97 aa9.96□□□□□ -0.82
TMEM39A-203ENST00000461654 C10orf25Q5T742 122 aa9.95□□□□□ -0.82
TMEM39A-203ENST00000461654 CARD19Q96LW7 228 aa9.95□□□□□ -0.82
TMEM39A-203ENST00000461654 KRTAP17-1Q9BYP8 105 aa9.95□□□□□ -0.82
TMEM39A-203ENST00000461654 TRAV16A0A0A6YYK6 109 aaPredicted RBP9.94□□□□□ -0.82
TMEM39A-203ENST00000461654 IFITM1P13164 125 aa9.94□□□□□ -0.82
TMEM39A-203ENST00000461654 HINT1P49773 126 aaPredicted RBP9.94□□□□□ -0.82
TMEM39A-203ENST00000461654 PTTG1IPP53801 180 aa9.94□□□□□ -0.82
TMEM39A-203ENST00000461654 ADAMTSL4-AS1Q5T5F5 129 aa9.94□□□□□ -0.82
TMEM39A-203ENST00000461654 Q6ZRU5 148 aa9.94□□□□□ -0.82
TMEM39A-203ENST00000461654 CEND1Q8N111 149 aa9.94□□□□□ -0.82
TMEM39A-203ENST00000461654 LITAFQ99732 161 aa9.94□□□□□ -0.82
TMEM39A-203ENST00000461654 TMEM238LA0A1B0GVL6 79 aa9.93□□□□□ -0.82
TMEM39A-203ENST00000461654 A6NJY4 79 aa9.93□□□□□ -0.82
TMEM39A-203ENST00000461654 C16orf90A8MZG2 172 aa9.93□□□□□ -0.82
TMEM39A-203ENST00000461654 BATFQ16520 125 aa9.93□□□□□ -0.82
TMEM39A-203ENST00000461654 MIR7-3HGQ8N6C7 128 aa9.93□□□□□ -0.82
TMEM39A-203ENST00000461654 C6orf48Q9UBA6 75 aa9.93□□□□□ -0.82
TMEM39A-203ENST00000461654 CDK2AP2O75956 126 aa9.92□□□□□ -0.82
TMEM39A-203ENST00000461654 RPL24P83731 157 aaKnown RBP9.92□□□□□ -0.82
TMEM39A-203ENST00000461654 RNF151Q2KHN1 245 aa9.92□□□□□ -0.82
TMEM39A-203ENST00000461654 DAND5Q8N907 189 aa9.92□□□□□ -0.82
TMEM39A-203ENST00000461654 LRCOL1A6NCL2 159 aa9.91□□□□□ -0.82
TMEM39A-203ENST00000461654 EREGO14944 169 aa9.91□□□□□ -0.82
TMEM39A-203ENST00000461654 WFDC2Q14508 124 aa9.91□□□□□ -0.82
TMEM39A-203ENST00000461654 C9orf116Q5BN46 136 aaPredicted RBP9.91□□□□□ -0.82
TMEM39A-203ENST00000461654 BVES-AS1Q5T3Y7 98 aa9.91□□□□□ -0.82
TMEM39A-203ENST00000461654 MUSTN1Q8IVN3 82 aa9.91□□□□□ -0.82
TMEM39A-203ENST00000461654 NPC2P61916 151 aa9.9□□□□□ -0.82
TMEM39A-203ENST00000461654 LINC00308Q8TCZ7 52 aa9.9□□□□□ -0.82
TMEM39A-203ENST00000461654 A0A087WTM6 91 aa9.89□□□□□ -0.83
TMEM39A-203ENST00000461654 A6NDN8 102 aa9.89□□□□□ -0.83
TMEM39A-203ENST00000461654 CNBPP62633 177 aaKnown RBP9.89□□□□□ -0.83
TMEM39A-203ENST00000461654 IGLV2-33A0A075B6J2 118 aaPredicted RBP9.88□□□□□ -0.83
TMEM39A-203ENST00000461654 NDUFC2-KCTD14E9PQ53 114 aa9.88□□□□□ -0.83
TMEM39A-203ENST00000461654 PPDPFQ9H3Y8 114 aa9.88□□□□□ -0.83
TMEM39A-203ENST00000461654 PKIGQ9Y2B9 76 aa9.88□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 341.4 ms