RNA–Protein interactions for RNA: ENST00000461063.6

SOX2-OT-202, SOX2 overlapping transcript, humanhuman

TSL 3 BASIC

Gene SOX2-OT, Length 566 nt, Biotype sense overlapping.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2-OT-202ENST00000461063 C9orf129Q5T035 196 aaKnown RBP5.3□□□□□ -1.56
SOX2-OT-202ENST00000461063 ZC2HC1BQ5TFG8 222 aa5.3□□□□□ -1.56
SOX2-OT-202ENST00000461063 TEX43Q6ZNM6 134 aa5.3□□□□□ -1.56
SOX2-OT-202ENST00000461063 LINC01561Q8N1V8 128 aa5.3□□□□□ -1.56
SOX2-OT-202ENST00000461063 LAMTOR2Q9Y2Q5 125 aa5.3□□□□□ -1.56
SOX2-OT-202ENST00000461063 UBE2BP63146 152 aa5.29□□□□□ -1.56
SOX2-OT-202ENST00000461063 C2orf66Q6UXQ4 117 aa5.29□□□□□ -1.56
SOX2-OT-202ENST00000461063 LINC00173Q6ZV60 143 aa5.29□□□□□ -1.56
SOX2-OT-202ENST00000461063 Q8N8P6 123 aa5.29□□□□□ -1.56
SOX2-OT-202ENST00000461063 PACRGQ96M98 296 aaPredicted RBP5.29□□□□□ -1.56
SOX2-OT-202ENST00000461063 AMELXQ99217 191 aa5.29□□□□□ -1.56
SOX2-OT-202ENST00000461063 C2orf88Q9BSF0 95 aa5.29□□□□□ -1.56
SOX2-OT-202ENST00000461063 MAP1LC3AQ9H492 121 aa5.29□□□□□ -1.56
SOX2-OT-202ENST00000461063 CYSLTR1Q9Y271 337 aa5.29□□□□□ -1.56
SOX2-OT-202ENST00000461063 IGLV1-50A0A075B6I6 118 aa5.28□□□□□ -1.56
SOX2-OT-202ENST00000461063 Q6ZN92 141 aa5.28□□□□□ -1.56
SOX2-OT-202ENST00000461063 VCX2Q9H322 139 aa5.28□□□□□ -1.56
SOX2-OT-202ENST00000461063 IGIPA6NJ69 53 aa5.27□□□□□ -1.57
SOX2-OT-202ENST00000461063 MT-ND4LP03901 98 aa5.27□□□□□ -1.57
SOX2-OT-202ENST00000461063 PRSS2P07478 247 aa5.27□□□□□ -1.57
SOX2-OT-202ENST00000461063 NPSP0C0P6 89 aa5.27□□□□□ -1.57
SOX2-OT-202ENST00000461063 PNRC1Q12796 327 aaPredicted RBP5.27□□□□□ -1.57
SOX2-OT-202ENST00000461063 ORMDL2Q53FV1 153 aa5.27□□□□□ -1.57
SOX2-OT-202ENST00000461063 FAM19A3Q7Z5A8 133 aa5.27□□□□□ -1.57
SOX2-OT-202ENST00000461063 TOMM7Q9P0U1 55 aa5.27□□□□□ -1.57
SOX2-OT-202ENST00000461063 MUC2Q02817 5179 aa5.27□□□□□ -1.57
SOX2-OT-202ENST00000461063 K7EMI3 77 aa5.26□□□□□ -1.57
SOX2-OT-202ENST00000461063 CKS1BP61024 79 aa5.26□□□□□ -1.57
SOX2-OT-202ENST00000461063 C6orf226Q5I0X4 101 aa5.26□□□□□ -1.57
SOX2-OT-202ENST00000461063 Q8IZM0 81 aa5.26□□□□□ -1.57
SOX2-OT-202ENST00000461063 LINC00469Q8N7U9 141 aa5.26□□□□□ -1.57
SOX2-OT-202ENST00000461063 ANAPC16Q96DE5 110 aa5.26□□□□□ -1.57
SOX2-OT-202ENST00000461063 ALKBH7Q9BT30 221 aaPredicted RBP5.26□□□□□ -1.57
SOX2-OT-202ENST00000461063 ZNF861PO60384 105 aa5.25□□□□□ -1.57
SOX2-OT-202ENST00000461063 XAGE1AQ9HD64 81 aa5.25□□□□□ -1.57
SOX2-OT-202ENST00000461063 NXT2Q9NPJ8 142 aaKnown RBP5.25□□□□□ -1.57
SOX2-OT-202ENST00000461063 CDKN2A-AS1Q9UH64 79 aa5.25□□□□□ -1.57
SOX2-OT-202ENST00000461063 C22orf24Q9Y442 160 aa5.25□□□□□ -1.57
SOX2-OT-202ENST00000461063 F8VRH5 84 aa5.24□□□□□ -1.57
SOX2-OT-202ENST00000461063 RPL13AP40429 203 aaKnown RBP5.24□□□□□ -1.57
SOX2-OT-202ENST00000461063 HERVK_113P63121 156 aa5.24□□□□□ -1.57
SOX2-OT-202ENST00000461063 SEC11AP67812 179 aa5.24□□□□□ -1.57
SOX2-OT-202ENST00000461063 LBHQ53QV2 105 aaPredicted RBP5.24□□□□□ -1.57
SOX2-OT-202ENST00000461063 PAPPA-AS1Q5QFB9 102 aa5.24□□□□□ -1.57
SOX2-OT-202ENST00000461063 CARHSP1Q9Y2V2 147 aaKnown RBP5.24□□□□□ -1.57
SOX2-OT-202ENST00000461063 NUPR1O60356 82 aa5.23□□□□□ -1.57
SOX2-OT-202ENST00000461063 TOMM6Q96B49 74 aa5.23□□□□□ -1.57
SOX2-OT-202ENST00000461063 TIMM17AQ99595 171 aa5.23□□□□□ -1.57
SOX2-OT-202ENST00000461063 CTDSP1Q9GZU7 261 aa5.23□□□□□ -1.57
SOX2-OT-202ENST00000461063 GEMIN7Q9H840 131 aaKnown RBP5.23□□□□□ -1.57
SOX2-OT-202ENST00000461063 G0S2P27469 103 aa5.22□□□□□ -1.57
SOX2-OT-202ENST00000461063 PRR4Q16378 134 aa5.22□□□□□ -1.57
SOX2-OT-202ENST00000461063 TP73-AS1Q9UF72 201 aa5.22□□□□□ -1.57
SOX2-OT-202ENST00000461063 SMIM1B2RUZ4 78 aa5.21□□□□□ -1.58
SOX2-OT-202ENST00000461063 ADCYAP1P18509 176 aa5.21□□□□□ -1.58
SOX2-OT-202ENST00000461063 CXCL5P42830 114 aa5.21□□□□□ -1.58
SOX2-OT-202ENST00000461063 RAB14P61106 215 aa5.21□□□□□ -1.58
SOX2-OT-202ENST00000461063 KIAA1644Q3SXP7 199 aa5.21□□□□□ -1.58
SOX2-OT-202ENST00000461063 ERASQ7Z444 233 aa5.21□□□□□ -1.58
SOX2-OT-202ENST00000461063 MRPL55Q7Z7F7 128 aaKnown RBP5.21□□□□□ -1.58
SOX2-OT-202ENST00000461063 SCGB3A1Q96QR1 104 aa5.21□□□□□ -1.58
SOX2-OT-202ENST00000461063 TINCRA0A1B0GVN0 87 aa5.2□□□□□ -1.58
SOX2-OT-202ENST00000461063 BCE1O60756 84 aa5.2□□□□□ -1.58
SOX2-OT-202ENST00000461063 RPL28P46779 137 aaKnown RBP5.2□□□□□ -1.58
SOX2-OT-202ENST00000461063 PDZD11Q5EBL8 140 aa5.2□□□□□ -1.58
SOX2-OT-202ENST00000461063 COX7B2Q8TF08 81 aa5.2□□□□□ -1.58
SOX2-OT-202ENST00000461063 IGLV5-45A0A087WSX0 123 aa5.19□□□□□ -1.58
SOX2-OT-202ENST00000461063 A0A087X002 238 aa5.19□□□□□ -1.58
SOX2-OT-202ENST00000461063 LINC01546A6NGU7 62 aa5.19□□□□□ -1.58
SOX2-OT-202ENST00000461063 RPL37AP8A6NKH3 93 aa5.19□□□□□ -1.58
SOX2-OT-202ENST00000461063 LINC00167Q96N53 147 aa5.19□□□□□ -1.58
SOX2-OT-202ENST00000461063 TRAV9-1A0A075B6T8 112 aa5.18□□□□□ -1.58
SOX2-OT-202ENST00000461063 GAGE10A6NGK3 116 aa5.18□□□□□ -1.58
SOX2-OT-202ENST00000461063 TSPAN13O95857 204 aa5.18□□□□□ -1.58
SOX2-OT-202ENST00000461063 SPINK8P0C7L1 97 aa5.18□□□□□ -1.58
SOX2-OT-202ENST00000461063 CLLU1Q5K131 121 aa5.18□□□□□ -1.58
SOX2-OT-202ENST00000461063 CST9LQ9H4G1 147 aa5.18□□□□□ -1.58
SOX2-OT-202ENST00000461063 IGLV5-37A0A075B6J1 123 aa5.17□□□□□ -1.58
SOX2-OT-202ENST00000461063 LINC01549A6NIU2 74 aa5.17□□□□□ -1.58
SOX2-OT-202ENST00000461063 CRYGAP11844 174 aa5.17□□□□□ -1.58
SOX2-OT-202ENST00000461063 RAB5BP61020 215 aa5.17□□□□□ -1.58
SOX2-OT-202ENST00000461063 GNB1LQ9BYB4 327 aa5.17□□□□□ -1.58
SOX2-OT-202ENST00000461063 TMEM218A2RU14 115 aa5.16□□□□□ -1.58
SOX2-OT-202ENST00000461063 PMVKQ15126 192 aa5.16□□□□□ -1.58
SOX2-OT-202ENST00000461063 KRTAP13-1Q8IUC0 172 aa5.16□□□□□ -1.58
SOX2-OT-202ENST00000461063 TYMSOSQ8TAI1 123 aa5.16□□□□□ -1.58
SOX2-OT-202ENST00000461063 ANAPC11Q9NYG5 84 aa5.16□□□□□ -1.58
SOX2-OT-202ENST00000461063 KRTAP13-2Q52LG2 175 aa5.15□□□□□ -1.59
SOX2-OT-202ENST00000461063 UQCC3Q6UW78 93 aa5.15□□□□□ -1.59
SOX2-OT-202ENST00000461063 NKAPP1Q8N9T2 125 aa5.15□□□□□ -1.59
SOX2-OT-202ENST00000461063 IGKV2-28A0A075B6P5 120 aa5.14□□□□□ -1.59
SOX2-OT-202ENST00000461063 IGLV5-39A0A0G2JS06 123 aa5.14□□□□□ -1.59
SOX2-OT-202ENST00000461063 H3BRM9 83 aa5.14□□□□□ -1.59
SOX2-OT-202ENST00000461063 SCO1O75880 301 aa5.14□□□□□ -1.59
SOX2-OT-202ENST00000461063 ATP5LO75964 103 aa5.14□□□□□ -1.59
SOX2-OT-202ENST00000461063 IGKV2D-28P01615 120 aa5.14□□□□□ -1.59
SOX2-OT-202ENST00000461063 S100PP25815 95 aa5.14□□□□□ -1.59
SOX2-OT-202ENST00000461063 UBE2AP49459 152 aa5.14□□□□□ -1.59
SOX2-OT-202ENST00000461063 FA2HQ7L5A8 372 aa5.14□□□□□ -1.59
SOX2-OT-202ENST00000461063 IGLC3P0DOY3 106 aa5.13□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms