RNA–Protein interactions for RNA: ENST00000459788.1

HDLBP-228, Transcript of high density lipoprotein binding protein, humanhuman

TSL 2

Gene HDLBP, Length 563 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-228ENST00000459788 PHF5AQ7RTV0 110 aaKnown RBP6.14□□□□□ -1.43
HDLBP-228ENST00000459788 DIRC1Q969H9 104 aa6.14□□□□□ -1.43
HDLBP-228ENST00000459788 ALKBH7Q9BT30 221 aaPredicted RBP6.14□□□□□ -1.43
HDLBP-228ENST00000459788 GEMIN7Q9H840 131 aaKnown RBP6.14□□□□□ -1.43
HDLBP-228ENST00000459788 IGLV5-45A0A087WSX0 123 aa6.13□□□□□ -1.43
HDLBP-228ENST00000459788 TINCRA0A1B0GVN0 87 aa6.13□□□□□ -1.43
HDLBP-228ENST00000459788 F8VRH5 84 aa6.13□□□□□ -1.43
HDLBP-228ENST00000459788 IGLV7-43P04211 117 aa6.13□□□□□ -1.43
HDLBP-228ENST00000459788 PDZD11Q5EBL8 140 aa6.13□□□□□ -1.43
HDLBP-228ENST00000459788 C1orf137Q5JT78 98 aa6.13□□□□□ -1.43
HDLBP-228ENST00000459788 SCGB3A1Q96QR1 104 aa6.13□□□□□ -1.43
HDLBP-228ENST00000459788 CARHSP1Q9Y2V2 147 aaKnown RBP6.13□□□□□ -1.43
HDLBP-228ENST00000459788 GAGE2EQ4V326 116 aa6.12□□□□□ -1.43
HDLBP-228ENST00000459788 C2orf82Q6UX34 121 aa6.12□□□□□ -1.43
HDLBP-228ENST00000459788 GAGE2DQ9UEU5 116 aa6.12□□□□□ -1.43
HDLBP-228ENST00000459788 TP73-AS1Q9UF72 201 aa6.12□□□□□ -1.43
HDLBP-228ENST00000459788 CDKN2A-AS1Q9UH64 79 aa6.12□□□□□ -1.43
HDLBP-228ENST00000459788 M0QXV9 152 aa6.11□□□□□ -1.43
HDLBP-228ENST00000459788 KIAA1644Q3SXP7 199 aa6.11□□□□□ -1.43
HDLBP-228ENST00000459788 LBHQ53QV2 105 aaPredicted RBP6.11□□□□□ -1.43
HDLBP-228ENST00000459788 C9orf129Q5T035 196 aaKnown RBP6.11□□□□□ -1.43
HDLBP-228ENST00000459788 FAM19A5Q7Z5A7 132 aaPredicted RBP6.11□□□□□ -1.43
HDLBP-228ENST00000459788 COMMD7Q86VX2 200 aa6.11□□□□□ -1.43
HDLBP-228ENST00000459788 MRPL18Q9H0U6 180 aaKnown RBP6.11□□□□□ -1.43
HDLBP-228ENST00000459788 FAM168BA1KXE4 195 aa6.1□□□□□ -1.43
HDLBP-228ENST00000459788 H0Y9J4 135 aa6.1□□□□□ -1.43
HDLBP-228ENST00000459788 NUPR1O60356 82 aa6.1□□□□□ -1.43
HDLBP-228ENST00000459788 PMVKQ15126 192 aa6.1□□□□□ -1.43
HDLBP-228ENST00000459788 ZC2HC1BQ5TFG8 222 aa6.1□□□□□ -1.43
HDLBP-228ENST00000459788 FA2HQ7L5A8 372 aa6.1□□□□□ -1.43
HDLBP-228ENST00000459788 KRTAP7-1Q8IUC3 87 aa6.1□□□□□ -1.43
HDLBP-228ENST00000459788 CST9LQ9H4G1 147 aa6.1□□□□□ -1.43
HDLBP-228ENST00000459788 SMCO4Q9NRQ5 59 aa6.1□□□□□ -1.43
HDLBP-228ENST00000459788 TOMM7Q9P0U1 55 aa6.1□□□□□ -1.43
HDLBP-228ENST00000459788 IGLV1-50A0A075B6I6 118 aa6.09□□□□□ -1.43
HDLBP-228ENST00000459788 SMIM1B2RUZ4 78 aa6.09□□□□□ -1.43
HDLBP-228ENST00000459788 UBE2BP63146 152 aa6.09□□□□□ -1.43
HDLBP-228ENST00000459788 FABP9Q0Z7S8 132 aa6.09□□□□□ -1.43
HDLBP-228ENST00000459788 LINC00469Q8N7U9 141 aa6.09□□□□□ -1.43
HDLBP-228ENST00000459788 H3BRM9 83 aa6.08□□□□□ -1.44
HDLBP-228ENST00000459788 COX7B2Q8TF08 81 aa6.08□□□□□ -1.44
HDLBP-228ENST00000459788 RPS10P5Q9NQ39 176 aa6.08□□□□□ -1.44
HDLBP-228ENST00000459788 UBR4Q5T4S7 5183 aa6.08□□□□□ -1.44
HDLBP-228ENST00000459788 RAB5BP61020 215 aa6.07□□□□□ -1.44
HDLBP-228ENST00000459788 SFTA2Q6UW10 78 aa6.07□□□□□ -1.44
HDLBP-228ENST00000459788 IGLV5-37A0A075B6J1 123 aa6.06□□□□□ -1.44
HDLBP-228ENST00000459788 SNAPINO95295 136 aa6.06□□□□□ -1.44
HDLBP-228ENST00000459788 IGLC3P0DOY3 106 aa6.06□□□□□ -1.44
HDLBP-228ENST00000459788 RPL13AP40429 203 aaKnown RBP6.06□□□□□ -1.44
HDLBP-228ENST00000459788 LRP2P98164 4655 aa6.06□□□□□ -1.44
HDLBP-228ENST00000459788 NDUFA5Q16718 116 aa6.06□□□□□ -1.44
HDLBP-228ENST00000459788 KRTAP11-1Q8IUC1 163 aa6.06□□□□□ -1.44
HDLBP-228ENST00000459788 C22orf24Q9Y442 160 aa6.06□□□□□ -1.44
HDLBP-228ENST00000459788 IGLV5-39A0A0G2JS06 123 aa6.05□□□□□ -1.44
HDLBP-228ENST00000459788 ZNF861PO60384 105 aa6.05□□□□□ -1.44
HDLBP-228ENST00000459788 HBDP02042 147 aa6.05□□□□□ -1.44
HDLBP-228ENST00000459788 LINC00614P0C842 121 aa6.05□□□□□ -1.44
HDLBP-228ENST00000459788 SVBPQ8N300 66 aa6.05□□□□□ -1.44
HDLBP-228ENST00000459788 C18orf32Q8TCD1 76 aa6.05□□□□□ -1.44
HDLBP-228ENST00000459788 TRAPPC1Q9Y5R8 145 aa6.05□□□□□ -1.44
HDLBP-228ENST00000459788 ATP5LO75964 103 aa6.04□□□□□ -1.44
HDLBP-228ENST00000459788 KRTAP1-4P0C5Y4 121 aa6.04□□□□□ -1.44
HDLBP-228ENST00000459788 COX17Q14061 63 aa6.04□□□□□ -1.44
HDLBP-228ENST00000459788 MRPL55Q7Z7F7 128 aaKnown RBP6.04□□□□□ -1.44
HDLBP-228ENST00000459788 XAGE1AQ9HD64 81 aa6.04□□□□□ -1.44
HDLBP-228ENST00000459788 A0A096LNJ9 63 aa6.03□□□□□ -1.44
HDLBP-228ENST00000459788 RPL28P46779 137 aaKnown RBP6.03□□□□□ -1.44
HDLBP-228ENST00000459788 BCE1O60756 84 aa6.02□□□□□ -1.45
HDLBP-228ENST00000459788 APOC3P02656 99 aa6.02□□□□□ -1.45
HDLBP-228ENST00000459788 SPINK8P0C7L1 97 aa6.02□□□□□ -1.45
HDLBP-228ENST00000459788 URB1-AS1Q96HZ7 61 aa6.02□□□□□ -1.45
HDLBP-228ENST00000459788 PRR26Q8N8Z3 221 aa6.01□□□□□ -1.45
HDLBP-228ENST00000459788 CHCHD1Q96BP2 118 aaKnown RBP6.01□□□□□ -1.45
HDLBP-228ENST00000459788 ZNF22P17026 224 aaPredicted RBP6□□□□□ -1.45
HDLBP-228ENST00000459788 NKAPP1Q8N9T2 125 aa6□□□□□ -1.45
HDLBP-228ENST00000459788 LINC00167Q96N53 147 aa6□□□□□ -1.45
HDLBP-228ENST00000459788 TRAV12-1A0A0B4J245 112 aa5.99□□□□□ -1.45
HDLBP-228ENST00000459788 NDUFA6P56556 154 aa5.99□□□□□ -1.45
HDLBP-228ENST00000459788 RPL24P83731 157 aaKnown RBP5.99□□□□□ -1.45
HDLBP-228ENST00000459788 CTAG1AP78358 180 aa5.98□□□□□ -1.45
HDLBP-228ENST00000459788 BAGE3Q86Y29 109 aa5.98□□□□□ -1.45
HDLBP-228ENST00000459788 YPEL4Q96NS1 127 aa5.98□□□□□ -1.45
HDLBP-228ENST00000459788 ERG28Q9UKR5 140 aa5.98□□□□□ -1.45
HDLBP-228ENST00000459788 C11orf86A6NJI1 115 aa5.97□□□□□ -1.45
HDLBP-228ENST00000459788 KRTAP13-1Q8IUC0 172 aa5.97□□□□□ -1.45
HDLBP-228ENST00000459788 CHTOPQ9Y3Y2 248 aaKnown RBP5.97□□□□□ -1.45
HDLBP-228ENST00000459788 FAM229BQ4G0N7 80 aa5.96□□□□□ -1.46
HDLBP-228ENST00000459788 TMEM170BQ5T4T1 132 aa5.96□□□□□ -1.46
HDLBP-228ENST00000459788 ZNF625Q96I27 306 aaPredicted RBP5.96□□□□□ -1.46
HDLBP-228ENST00000459788 SND1-IT1Q9HBX3 110 aa5.96□□□□□ -1.46
HDLBP-228ENST00000459788 RPL37AP8A6NKH3 93 aa5.95□□□□□ -1.46
HDLBP-228ENST00000459788 LINC00587B1AMM8 73 aa5.95□□□□□ -1.46
HDLBP-228ENST00000459788 CRYGAP11844 174 aa5.95□□□□□ -1.46
HDLBP-228ENST00000459788 VPREB1P12018 145 aa5.95□□□□□ -1.46
HDLBP-228ENST00000459788 PFN2P35080 140 aa5.95□□□□□ -1.46
HDLBP-228ENST00000459788 IFI27L1Q96BM0 104 aa5.95□□□□□ -1.46
HDLBP-228ENST00000459788 TMEM223A0PJW6 202 aa5.94□□□□□ -1.46
HDLBP-228ENST00000459788 UBE2AP49459 152 aa5.94□□□□□ -1.46
HDLBP-228ENST00000459788 PMCHL1Q16048 86 aa5.94□□□□□ -1.46
HDLBP-228ENST00000459788 HERV-K104P63124 156 aa5.93□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 58.8 ms