RNA–Protein interactions for RNA: ENST00000459639.5

U2AF1-204, Transcript of U2 small nuclear RNA auxiliary factor 1, humanhuman

TSL 1 (best) BASIC

Gene U2AF1, Length 1,675 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1-204ENST00000459639 CKS1BP61024 79 aa16.29■□□□□ 0.2
U2AF1-204ENST00000459639 ADAMTSL4-AS1Q5T5F5 129 aa16.29■□□□□ 0.2
U2AF1-204ENST00000459639 DNAH7Q8WXX0 4024 aa16.29■□□□□ 0.2
U2AF1-204ENST00000459639 CSMD3Q7Z407 3707 aa16.27■□□□□ 0.19
U2AF1-204ENST00000459639 TMEM238LA0A1B0GVL6 79 aa16.26■□□□□ 0.19
U2AF1-204ENST00000459639 A6NJY4 79 aa16.26■□□□□ 0.19
U2AF1-204ENST00000459639 C2orf82Q6UX34 121 aa16.25■□□□□ 0.19
U2AF1-204ENST00000459639 WWC2-AS2Q96NR7 200 aa16.25■□□□□ 0.19
U2AF1-204ENST00000459639 SMIM13P0DJ93 91 aa16.24■□□□□ 0.19
U2AF1-204ENST00000459639 IFITM1P13164 125 aa16.24■□□□□ 0.19
U2AF1-204ENST00000459639 MUSTN1Q8IVN3 82 aa16.24■□□□□ 0.19
U2AF1-204ENST00000459639 KRTAP1-5Q9BYS1 174 aa16.24■□□□□ 0.19
U2AF1-204ENST00000459639 RPL24P83731 157 aaKnown RBP16.23■□□□□ 0.19
U2AF1-204ENST00000459639 C15orf56Q8N910 161 aa16.23■□□□□ 0.19
U2AF1-204ENST00000459639 NHP2Q9NX24 153 aaKnown RBP16.23■□□□□ 0.19
U2AF1-204ENST00000459639 COX11Q9Y6N1 276 aa16.23■□□□□ 0.19
U2AF1-204ENST00000459639 ERG28Q9UKR5 140 aa16.22■□□□□ 0.19
U2AF1-204ENST00000459639 A0A0U1RRA0 63 aa16.21■□□□□ 0.19
U2AF1-204ENST00000459639 TTC32Q5I0X7 151 aa16.21■□□□□ 0.19
U2AF1-204ENST00000459639 DAND5Q8N907 189 aa16.21■□□□□ 0.19
U2AF1-204ENST00000459639 NTN5Q8WTR8 489 aaPredicted RBP16.21■□□□□ 0.19
U2AF1-204ENST00000459639 A0A1B0GWB2 263 aa16.2■□□□□ 0.18
U2AF1-204ENST00000459639 C6orf223Q8N319 242 aa16.2■□□□□ 0.18
U2AF1-204ENST00000459639 COPS9Q8WXC6 57 aa16.2■□□□□ 0.18
U2AF1-204ENST00000459639 ZNF561-AS1K7EIQ3 104 aa16.19■□□□□ 0.18
U2AF1-204ENST00000459639 GVQW2A0A096LPI5 108 aaPredicted RBP16.18■□□□□ 0.18
U2AF1-204ENST00000459639 TAX1BP3O14907 124 aa16.18■□□□□ 0.18
U2AF1-204ENST00000459639 LINC00158P58513 81 aa16.18■□□□□ 0.18
U2AF1-204ENST00000459639 PPDPFQ9H3Y8 114 aa16.18■□□□□ 0.18
U2AF1-204ENST00000459639 A4D1N5 150 aa16.18■□□□□ 0.18
U2AF1-204ENST00000459639 HIGD2BQ4VC39 106 aa16.18■□□□□ 0.18
U2AF1-204ENST00000459639 LINC00308Q8TCZ7 52 aa16.18■□□□□ 0.18
U2AF1-204ENST00000459639 LINC00526Q96FQ7 95 aa16.18■□□□□ 0.18
U2AF1-204ENST00000459639 STARD9Q9P2P6 4700 aa16.17■□□□□ 0.18
U2AF1-204ENST00000459639 NBDYA0A0U1RRE5 68 aa16.17■□□□□ 0.18
U2AF1-204ENST00000459639 COX17Q14061 63 aa16.17■□□□□ 0.18
U2AF1-204ENST00000459639 PFN2P35080 140 aa16.16■□□□□ 0.18
U2AF1-204ENST00000459639 NPC2P61916 151 aa16.16■□□□□ 0.18
U2AF1-204ENST00000459639 UNQ6190/PRO20217Q6UXQ8 127 aa16.16■□□□□ 0.18
U2AF1-204ENST00000459639 MIR7-3HGQ8N6C7 128 aa16.16■□□□□ 0.18
U2AF1-204ENST00000459639 C2orf48Q96LS8 159 aa16.16■□□□□ 0.18
U2AF1-204ENST00000459639 PLECQ15149 4684 aaKnown RBP16.16■□□□□ 0.18
U2AF1-204ENST00000459639 F8WDY8 70 aa16.15■□□□□ 0.18
U2AF1-204ENST00000459639 K7ERJ3 54 aa16.15■□□□□ 0.18
U2AF1-204ENST00000459639 TRAV16A0A0A6YYK6 109 aaPredicted RBP16.14■□□□□ 0.18
U2AF1-204ENST00000459639 C10orf25Q5T742 122 aa16.14■□□□□ 0.18
U2AF1-204ENST00000459639 CASC10Q5T4H9 136 aa16.13■□□□□ 0.17
U2AF1-204ENST00000459639 SOSTDC1Q6X4U4 206 aa16.13■□□□□ 0.17
U2AF1-204ENST00000459639 CAMK2N2Q96S95 79 aa16.13■□□□□ 0.17
U2AF1-204ENST00000459639 EIF4EBP3O60516 100 aaPredicted RBP16.12■□□□□ 0.17
U2AF1-204ENST00000459639 TENM2Q9NT68 2774 aa16.12■□□□□ 0.17
U2AF1-204ENST00000459639 A0A1B0GV90 55 aa16.11■□□□□ 0.17
U2AF1-204ENST00000459639 CFC1BP0CG36 223 aa16.11■□□□□ 0.17
U2AF1-204ENST00000459639 CFC1P0CG37 223 aa16.11■□□□□ 0.17
U2AF1-204ENST00000459639 RAB37Q96AX2 223 aa16.11■□□□□ 0.17
U2AF1-204ENST00000459639 DNAH1Q9P2D7 4330 aa16.11■□□□□ 0.17
U2AF1-204ENST00000459639 A0A0B4J2C4 111 aa16.11■□□□□ 0.17
U2AF1-204ENST00000459639 TRBV30A0A0K0K1B3 111 aa16.11■□□□□ 0.17
U2AF1-204ENST00000459639 USP17L23D6RBM5 183 aa16.11■□□□□ 0.17
U2AF1-204ENST00000459639 C6orf48Q9UBA6 75 aa16.1■□□□□ 0.17
U2AF1-204ENST00000459639 C9orf116Q5BN46 136 aaPredicted RBP16.09■□□□□ 0.17
U2AF1-204ENST00000459639 C9orf118A6NHY6 69 aa16.08■□□□□ 0.16
U2AF1-204ENST00000459639 TGP01266 2768 aa16.07■□□□□ 0.16
U2AF1-204ENST00000459639 LYSTQ99698 3801 aa16.07■□□□□ 0.16
U2AF1-204ENST00000459639 C3orf84H3BNL1 204 aa16.07■□□□□ 0.16
U2AF1-204ENST00000459639 Q6ZRU5 148 aa16.07■□□□□ 0.16
U2AF1-204ENST00000459639 PSCAO43653 123 aa16.05■□□□□ 0.16
U2AF1-204ENST00000459639 SYCNQ0VAF6 134 aa16.05■□□□□ 0.16
U2AF1-204ENST00000459639 PRO1854Q9UHT4 67 aa16.05■□□□□ 0.16
U2AF1-204ENST00000459639 LOC107984156A0A0G2JMH3 177 aa16.04■□□□□ 0.16
U2AF1-204ENST00000459639 ARL17AQ8IVW1 177 aa16.04■□□□□ 0.16
U2AF1-204ENST00000459639 VPS13DQ5THJ4 4388 aa16.03■□□□□ 0.16
U2AF1-204ENST00000459639 SND1-IT1Q9HBX3 110 aa16.02■□□□□ 0.16
U2AF1-204ENST00000459639 H3BUT2 72 aa16.02■□□□□ 0.15
U2AF1-204ENST00000459639 PGPEP1Q9NXJ5 209 aa16.02■□□□□ 0.15
U2AF1-204ENST00000459639 LECT2O14960 151 aa16.01■□□□□ 0.15
U2AF1-204ENST00000459639 CARD19Q96LW7 228 aa16■□□□□ 0.15
U2AF1-204ENST00000459639 RNF151Q2KHN1 245 aa15.99■□□□□ 0.15
U2AF1-204ENST00000459639 M0R2N4 97 aa15.99■□□□□ 0.15
U2AF1-204ENST00000459639 TSPAN13O95857 204 aa15.99■□□□□ 0.15
U2AF1-204ENST00000459639 Q6ZR54 194 aa15.99■□□□□ 0.15
U2AF1-204ENST00000459639 Q6ZRN7 208 aaPredicted RBP15.99■□□□□ 0.15
U2AF1-204ENST00000459639 NAA38Q9BRA0 125 aaKnown RBP15.99■□□□□ 0.15
U2AF1-204ENST00000459639 WFDC2Q14508 124 aa15.98■□□□□ 0.15
U2AF1-204ENST00000459639 LINC00476Q8WZB0 136 aa15.98■□□□□ 0.15
U2AF1-204ENST00000459639 LY6G6CO95867 125 aa15.96■□□□□ 0.15
U2AF1-204ENST00000459639 SLPIP03973 132 aa15.96■□□□□ 0.15
U2AF1-204ENST00000459639 C14orf177Q52M58 125 aa15.96■□□□□ 0.15
U2AF1-204ENST00000459639 NDUFC2-KCTD14E9PQ53 114 aa15.95■□□□□ 0.14
U2AF1-204ENST00000459639 A0A1W2PPM0 123 aa15.95■□□□□ 0.14
U2AF1-204ENST00000459639 NDUFC2O95298 119 aa15.93■□□□□ 0.14
U2AF1-204ENST00000459639 IGKV2-28A0A075B6P5 120 aa15.92■□□□□ 0.14
U2AF1-204ENST00000459639 IGKV2D-28P01615 120 aa15.92■□□□□ 0.14
U2AF1-204ENST00000459639 RPL13AP40429 203 aaKnown RBP15.92■□□□□ 0.14
U2AF1-204ENST00000459639 TLX1NBP0CAT3 122 aa15.92■□□□□ 0.14
U2AF1-204ENST00000459639 VAMP3Q15836 100 aa15.92■□□□□ 0.14
U2AF1-204ENST00000459639 TRAV13-2A0A0B4J235 113 aa15.91■□□□□ 0.14
U2AF1-204ENST00000459639 FABP2P12104 132 aa15.91■□□□□ 0.14
U2AF1-204ENST00000459639 LRCOL1A6NCL2 159 aa15.9■□□□□ 0.14
U2AF1-204ENST00000459639 H7C2G1 150 aa15.9■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms