RNA–Protein interactions for RNA: ENST00000454350.5

UBE2D4-208, Transcript of ubiquitin conjugating enzyme E2 D4 (putative), humanhuman

TSL 2

Gene UBE2D4, Length 789 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D4-208ENST00000454350 ALKBH7Q9BT30 221 aaPredicted RBP11.11□□□□□ -0.63
UBE2D4-208ENST00000454350 CKS1BP61024 79 aa11.1□□□□□ -0.63
UBE2D4-208ENST00000454350 C6orf226Q5I0X4 101 aa11.1□□□□□ -0.63
UBE2D4-208ENST00000454350 ERASQ7Z444 233 aa11.09□□□□□ -0.63
UBE2D4-208ENST00000454350 XAGE1AQ9HD64 81 aa11.09□□□□□ -0.63
UBE2D4-208ENST00000454350 C22orf24Q9Y442 160 aa11.09□□□□□ -0.63
UBE2D4-208ENST00000454350 IGLV1-50A0A075B6I6 118 aa11.08□□□□□ -0.64
UBE2D4-208ENST00000454350 LINC01546A6NGU7 62 aa11.08□□□□□ -0.64
UBE2D4-208ENST00000454350 SEC11AP67812 179 aa11.08□□□□□ -0.64
UBE2D4-208ENST00000454350 PAPPA-AS1Q5QFB9 102 aa11.08□□□□□ -0.64
UBE2D4-208ENST00000454350 TRAV9-1A0A075B6T8 112 aa11.07□□□□□ -0.64
UBE2D4-208ENST00000454350 TMEM218A2RU14 115 aa11.07□□□□□ -0.64
UBE2D4-208ENST00000454350 SMIM1B2RUZ4 78 aa11.07□□□□□ -0.64
UBE2D4-208ENST00000454350 F8VRH5 84 aa11.07□□□□□ -0.64
UBE2D4-208ENST00000454350 G0S2P27469 103 aa11.07□□□□□ -0.64
UBE2D4-208ENST00000454350 GEMIN7Q9H840 131 aaKnown RBP11.07□□□□□ -0.64
UBE2D4-208ENST00000454350 IGLV5-45A0A087WSX0 123 aa11.06□□□□□ -0.64
UBE2D4-208ENST00000454350 IFITM2Q01629 132 aa11.06□□□□□ -0.64
UBE2D4-208ENST00000454350 UQCC3Q6UW78 93 aa11.05□□□□□ -0.64
UBE2D4-208ENST00000454350 SCGB3A1Q96QR1 104 aa11.05□□□□□ -0.64
UBE2D4-208ENST00000454350 TINCRA0A1B0GVN0 87 aa11.04□□□□□ -0.64
UBE2D4-208ENST00000454350 ZNF861PO60384 105 aa11.04□□□□□ -0.64
UBE2D4-208ENST00000454350 GNB1LQ9BYB4 327 aa11.04□□□□□ -0.64
UBE2D4-208ENST00000454350 TP73-AS1Q9UF72 201 aa11.03□□□□□ -0.64
UBE2D4-208ENST00000454350 NUPR1O60356 82 aa11.02□□□□□ -0.65
UBE2D4-208ENST00000454350 CXCL5P42830 114 aa11.02□□□□□ -0.65
UBE2D4-208ENST00000454350 PDZD11Q5EBL8 140 aa11.02□□□□□ -0.65
UBE2D4-208ENST00000454350 CST9LQ9H4G1 147 aa11.02□□□□□ -0.65
UBE2D4-208ENST00000454350 MRPL55Q7Z7F7 128 aaKnown RBP11.01□□□□□ -0.65
UBE2D4-208ENST00000454350 SEC11CQ9BY50 192 aa11.01□□□□□ -0.65
UBE2D4-208ENST00000454350 LBHQ53QV2 105 aaPredicted RBP11□□□□□ -0.65
UBE2D4-208ENST00000454350 COX7B2Q8TF08 81 aa11□□□□□ -0.65
UBE2D4-208ENST00000454350 CARHSP1Q9Y2V2 147 aaKnown RBP11□□□□□ -0.65
UBE2D4-208ENST00000454350 LINC01549A6NIU2 74 aa10.98□□□□□ -0.65
UBE2D4-208ENST00000454350 RPL13AP40429 203 aaKnown RBP10.98□□□□□ -0.65
UBE2D4-208ENST00000454350 SPINK8P0C7L1 97 aa10.97□□□□□ -0.65
UBE2D4-208ENST00000454350 PMVKQ15126 192 aa10.97□□□□□ -0.65
UBE2D4-208ENST00000454350 C10orf91Q5T1B1 145 aa10.97□□□□□ -0.65
UBE2D4-208ENST00000454350 LINC00167Q96N53 147 aa10.97□□□□□ -0.65
UBE2D4-208ENST00000454350 IGLV5-37A0A075B6J1 123 aa10.96□□□□□ -0.65
UBE2D4-208ENST00000454350 A0A096LNJ9 63 aa10.96□□□□□ -0.65
UBE2D4-208ENST00000454350 BCE1O60756 84 aa10.96□□□□□ -0.65
UBE2D4-208ENST00000454350 S100PP25815 95 aa10.96□□□□□ -0.65
UBE2D4-208ENST00000454350 URB1-AS1Q96HZ7 61 aa10.95□□□□□ -0.66
UBE2D4-208ENST00000454350 MRPL18Q9H0U6 180 aaKnown RBP10.95□□□□□ -0.66
UBE2D4-208ENST00000454350 A0A087X002 238 aa10.94□□□□□ -0.66
UBE2D4-208ENST00000454350 RPL37AP8A6NKH3 93 aa10.94□□□□□ -0.66
UBE2D4-208ENST00000454350 COX19Q49B96 90 aa10.94□□□□□ -0.66
UBE2D4-208ENST00000454350 KRTAP13-1Q8IUC0 172 aa10.94□□□□□ -0.66
UBE2D4-208ENST00000454350 FABP9Q0Z7S8 132 aa10.93□□□□□ -0.66
UBE2D4-208ENST00000454350 FA2HQ7L5A8 372 aa10.93□□□□□ -0.66
UBE2D4-208ENST00000454350 IGLV5-39A0A0G2JS06 123 aa10.92□□□□□ -0.66
UBE2D4-208ENST00000454350 IGLC3P0DOY3 106 aa10.92□□□□□ -0.66
UBE2D4-208ENST00000454350 RPL28P46779 137 aaKnown RBP10.92□□□□□ -0.66
UBE2D4-208ENST00000454350 RAB5BP61020 215 aa10.92□□□□□ -0.66
UBE2D4-208ENST00000454350 COMMD7Q86VX2 200 aa10.92□□□□□ -0.66
UBE2D4-208ENST00000454350 GAGE10A6NGK3 116 aa10.91□□□□□ -0.66
UBE2D4-208ENST00000454350 SMCO4Q9NRQ5 59 aa10.9□□□□□ -0.66
UBE2D4-208ENST00000454350 SCO1O75880 301 aa10.89□□□□□ -0.67
UBE2D4-208ENST00000454350 ZNF22P17026 224 aaPredicted RBP10.89□□□□□ -0.67
UBE2D4-208ENST00000454350 RHEBQ15382 184 aa10.89□□□□□ -0.67
UBE2D4-208ENST00000454350 H3BRM9 83 aa10.88□□□□□ -0.67
UBE2D4-208ENST00000454350 PRR4Q16378 134 aa10.88□□□□□ -0.67
UBE2D4-208ENST00000454350 C18orf32Q8TCD1 76 aa10.88□□□□□ -0.67
UBE2D4-208ENST00000454350 RPS10P5Q9NQ39 176 aa10.87□□□□□ -0.67
UBE2D4-208ENST00000454350 ANAPC11Q9NYG5 84 aa10.87□□□□□ -0.67
UBE2D4-208ENST00000454350 MUC2Q02817 5179 aa10.86□□□□□ -0.67
UBE2D4-208ENST00000454350 ATP5LO75964 103 aa10.86□□□□□ -0.67
UBE2D4-208ENST00000454350 KRTAP13-2Q52LG2 175 aa10.86□□□□□ -0.67
UBE2D4-208ENST00000454350 TSPAN13O95857 204 aa10.85□□□□□ -0.67
UBE2D4-208ENST00000454350 LINC00614P0C842 121 aa10.85□□□□□ -0.67
UBE2D4-208ENST00000454350 CRYGAP11844 174 aa10.85□□□□□ -0.67
UBE2D4-208ENST00000454350 VPREB1P12018 145 aa10.85□□□□□ -0.67
UBE2D4-208ENST00000454350 NKAPP1Q8N9T2 125 aa10.85□□□□□ -0.67
UBE2D4-208ENST00000454350 Q8NDZ9 215 aa10.85□□□□□ -0.67
UBE2D4-208ENST00000454350 PFN2P35080 140 aa10.84□□□□□ -0.67
UBE2D4-208ENST00000454350 PMCHL1Q16048 86 aa10.84□□□□□ -0.67
UBE2D4-208ENST00000454350 SND1-IT1Q9HBX3 110 aa10.84□□□□□ -0.67
UBE2D4-208ENST00000454350 IGKV2-28A0A075B6P5 120 aa10.83□□□□□ -0.68
UBE2D4-208ENST00000454350 C11orf86A6NJI1 115 aa10.83□□□□□ -0.68
UBE2D4-208ENST00000454350 IGKV2D-28P01615 120 aa10.83□□□□□ -0.68
UBE2D4-208ENST00000454350 HBDP02042 147 aa10.83□□□□□ -0.68
UBE2D4-208ENST00000454350 NDUFA6P56556 154 aa10.83□□□□□ -0.68
UBE2D4-208ENST00000454350 TYMSOSQ8TAI1 123 aa10.83□□□□□ -0.68
UBE2D4-208ENST00000454350 ERG28Q9UKR5 140 aa10.83□□□□□ -0.68
UBE2D4-208ENST00000454350 TRAPPC1Q9Y5R8 145 aa10.83□□□□□ -0.68
UBE2D4-208ENST00000454350 UBE2AP49459 152 aa10.8□□□□□ -0.68
UBE2D4-208ENST00000454350 COX17Q14061 63 aa10.8□□□□□ -0.68
UBE2D4-208ENST00000454350 ZNF625Q96I27 306 aaPredicted RBP10.8□□□□□ -0.68
UBE2D4-208ENST00000454350 TMEM238C9JI98 176 aa10.79□□□□□ -0.68
UBE2D4-208ENST00000454350 FAM229BQ4G0N7 80 aa10.79□□□□□ -0.68
UBE2D4-208ENST00000454350 BAGE3Q86Y29 109 aa10.79□□□□□ -0.68
UBE2D4-208ENST00000454350 PRLHP81277 87 aa10.78□□□□□ -0.68
UBE2D4-208ENST00000454350 TMEM126AQ9H061 195 aa10.78□□□□□ -0.68
UBE2D4-208ENST00000454350 M0R378 163 aa10.77□□□□□ -0.69
UBE2D4-208ENST00000454350 YPEL4Q96NS1 127 aa10.76□□□□□ -0.69
UBE2D4-208ENST00000454350 TMEM170BQ5T4T1 132 aa10.75□□□□□ -0.69
UBE2D4-208ENST00000454350 RPL24P83731 157 aaKnown RBP10.74□□□□□ -0.69
UBE2D4-208ENST00000454350 FAM19A1Q7Z5A9 133 aa10.74□□□□□ -0.69
UBE2D4-208ENST00000454350 APOC3P02656 99 aa10.73□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 87 ms