RNA–Protein interactions for RNA: ENST00000453341.1

TNFRSF25-208, Transcript of TNF receptor superfamily member 25, humanhuman

TSL 1 (best)

Gene TNFRSF25, Length 798 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF25-208ENST00000453341 TMEM218A2RU14 115 aa12.52□□□□□ -0.41
TNFRSF25-208ENST00000453341 UQCC3Q6UW78 93 aa12.52□□□□□ -0.41
TNFRSF25-208ENST00000453341 MRPL55Q7Z7F7 128 aaKnown RBP12.51□□□□□ -0.41
TNFRSF25-208ENST00000453341 TP73-AS1Q9UF72 201 aa12.5□□□□□ -0.41
TNFRSF25-208ENST00000453341 LOC389332A0A1B0GUA5 103 aa12.49□□□□□ -0.41
TNFRSF25-208ENST00000453341 LINC01547P58512 204 aaPredicted RBP12.48□□□□□ -0.41
TNFRSF25-208ENST00000453341 COMMD7Q86VX2 200 aa12.48□□□□□ -0.41
TNFRSF25-208ENST00000453341 PPDPFQ9H3Y8 114 aa12.48□□□□□ -0.41
TNFRSF25-208ENST00000453341 KRTAP13-1Q8IUC0 172 aa12.47□□□□□ -0.41
TNFRSF25-208ENST00000453341 IGLV4-3A0A075B6K6 122 aa12.46□□□□□ -0.41
TNFRSF25-208ENST00000453341 RAB5AP20339 215 aa12.46□□□□□ -0.41
TNFRSF25-208ENST00000453341 FAM229BQ4G0N7 80 aa12.46□□□□□ -0.41
TNFRSF25-208ENST00000453341 LINC01561Q8N1V8 128 aa12.46□□□□□ -0.41
TNFRSF25-208ENST00000453341 KRTAP4-1Q9BYQ7 146 aa12.46□□□□□ -0.41
TNFRSF25-208ENST00000453341 RPL37AP8A6NKH3 93 aa12.45□□□□□ -0.42
TNFRSF25-208ENST00000453341 LINC00167Q96N53 147 aa12.45□□□□□ -0.42
TNFRSF25-208ENST00000453341 SEC11CQ9BY50 192 aa12.45□□□□□ -0.42
TNFRSF25-208ENST00000453341 PRSS47A8MTI9 375 aa12.44□□□□□ -0.42
TNFRSF25-208ENST00000453341 IFI27P40305 119 aaPredicted RBP12.44□□□□□ -0.42
TNFRSF25-208ENST00000453341 MAP1LC3AQ9H492 121 aa12.44□□□□□ -0.42
TNFRSF25-208ENST00000453341 TOMM7Q9P0U1 55 aa12.44□□□□□ -0.42
TNFRSF25-208ENST00000453341 PRSS2P07478 247 aa12.43□□□□□ -0.42
TNFRSF25-208ENST00000453341 CKS1BP61024 79 aa12.43□□□□□ -0.42
TNFRSF25-208ENST00000453341 LAMTOR2Q9Y2Q5 125 aa12.43□□□□□ -0.42
TNFRSF25-208ENST00000453341 PYGO1Q9Y3Y4 419 aa12.43□□□□□ -0.42
TNFRSF25-208ENST00000453341 Q8N8P6 123 aa12.42□□□□□ -0.42
TNFRSF25-208ENST00000453341 KIAA1644Q3SXP7 199 aa12.41□□□□□ -0.42
TNFRSF25-208ENST00000453341 ZC2HC1BQ5TFG8 222 aa12.41□□□□□ -0.42
TNFRSF25-208ENST00000453341 TMEM141Q96I45 108 aa12.41□□□□□ -0.42
TNFRSF25-208ENST00000453341 GAGE10A6NGK3 116 aa12.4□□□□□ -0.42
TNFRSF25-208ENST00000453341 CTAG1AP78358 180 aa12.4□□□□□ -0.42
TNFRSF25-208ENST00000453341 C6orf226Q5I0X4 101 aa12.4□□□□□ -0.42
TNFRSF25-208ENST00000453341 Q6ZN92 141 aa12.4□□□□□ -0.42
TNFRSF25-208ENST00000453341 Q8IZM0 81 aa12.4□□□□□ -0.42
TNFRSF25-208ENST00000453341 IGKV2D-26A0A0A0MRZ7 120 aa12.39□□□□□ -0.43
TNFRSF25-208ENST00000453341 UBE2AP49459 152 aa12.39□□□□□ -0.43
TNFRSF25-208ENST00000453341 ASB16-AS1Q495Z4 193 aa12.39□□□□□ -0.43
TNFRSF25-208ENST00000453341 TEX43Q6ZNM6 134 aa12.38□□□□□ -0.43
TNFRSF25-208ENST00000453341 C10orf91Q5T1B1 145 aa12.37□□□□□ -0.43
TNFRSF25-208ENST00000453341 ALKBH7Q9BT30 221 aaPredicted RBP12.37□□□□□ -0.43
TNFRSF25-208ENST00000453341 TRAV9-1A0A075B6T8 112 aa12.36□□□□□ -0.43
TNFRSF25-208ENST00000453341 C2orf66Q6UXQ4 117 aa12.36□□□□□ -0.43
TNFRSF25-208ENST00000453341 S100PP25815 95 aa12.35□□□□□ -0.43
TNFRSF25-208ENST00000453341 CYSLTR1Q9Y271 337 aa12.35□□□□□ -0.43
TNFRSF25-208ENST00000453341 F8VRH5 84 aa12.34□□□□□ -0.43
TNFRSF25-208ENST00000453341 KRTAP13-3Q3SY46 172 aa12.34□□□□□ -0.43
TNFRSF25-208ENST00000453341 C3orf22Q8N5N4 141 aa12.34□□□□□ -0.43
TNFRSF25-208ENST00000453341 C2orf88Q9BSF0 95 aa12.34□□□□□ -0.43
TNFRSF25-208ENST00000453341 RPS10P5Q9NQ39 176 aa12.34□□□□□ -0.43
TNFRSF25-208ENST00000453341 ORMDL2Q53FV1 153 aa12.33□□□□□ -0.44
TNFRSF25-208ENST00000453341 AMELXQ99217 191 aa12.33□□□□□ -0.44
TNFRSF25-208ENST00000453341 NXT2Q9NPJ8 142 aaKnown RBP12.33□□□□□ -0.44
TNFRSF25-208ENST00000453341 GNB1LQ9BYB4 327 aa12.32□□□□□ -0.44
TNFRSF25-208ENST00000453341 IGLV5-37A0A075B6J1 123 aa12.31□□□□□ -0.44
TNFRSF25-208ENST00000453341 PRLHP81277 87 aa12.31□□□□□ -0.44
TNFRSF25-208ENST00000453341 LINC00337Q8N6G1 96 aa12.31□□□□□ -0.44
TNFRSF25-208ENST00000453341 IGIPA6NJ69 53 aa12.3□□□□□ -0.44
TNFRSF25-208ENST00000453341 RHEBQ15382 184 aa12.3□□□□□ -0.44
TNFRSF25-208ENST00000453341 FP248Q71RG6 208 aaPredicted RBP12.3□□□□□ -0.44
TNFRSF25-208ENST00000453341 FAM19A3Q7Z5A8 133 aa12.3□□□□□ -0.44
TNFRSF25-208ENST00000453341 K7EMI3 77 aa12.29□□□□□ -0.44
TNFRSF25-208ENST00000453341 SCO1O75880 301 aa12.29□□□□□ -0.44
TNFRSF25-208ENST00000453341 CDKN2A-AS1Q9UH64 79 aa12.29□□□□□ -0.44
TNFRSF25-208ENST00000453341 IGKV2-28A0A075B6P5 120 aa12.28□□□□□ -0.44
TNFRSF25-208ENST00000453341 IGKV2D-28P01615 120 aa12.28□□□□□ -0.44
TNFRSF25-208ENST00000453341 VCX2Q9H322 139 aa12.28□□□□□ -0.44
TNFRSF25-208ENST00000453341 LCE2CQ5TA81 110 aa12.27□□□□□ -0.45
TNFRSF25-208ENST00000453341 MRPL18Q9H0U6 180 aaKnown RBP12.27□□□□□ -0.45
TNFRSF25-208ENST00000453341 APOC3P02656 99 aa12.26□□□□□ -0.45
TNFRSF25-208ENST00000453341 FABP9Q0Z7S8 132 aa12.26□□□□□ -0.45
TNFRSF25-208ENST00000453341 CXCL5P42830 114 aa12.25□□□□□ -0.45
TNFRSF25-208ENST00000453341 COX19Q49B96 90 aa12.25□□□□□ -0.45
TNFRSF25-208ENST00000453341 NKAPP1Q8N9T2 125 aa12.25□□□□□ -0.45
TNFRSF25-208ENST00000453341 TOMM6Q96B49 74 aa12.25□□□□□ -0.45
TNFRSF25-208ENST00000453341 SPAG11AQ6PDA7 123 aa12.24□□□□□ -0.45
TNFRSF25-208ENST00000453341 PLEKHB2Q96CS7 222 aa12.24□□□□□ -0.45
TNFRSF25-208ENST00000453341 NPSP0C0P6 89 aa12.23□□□□□ -0.45
TNFRSF25-208ENST00000453341 SEC61BP60468 96 aaKnown RBP12.23□□□□□ -0.45
TNFRSF25-208ENST00000453341 HERVK_113P63121 156 aa12.23□□□□□ -0.45
TNFRSF25-208ENST00000453341 G0S2P27469 103 aa12.22□□□□□ -0.45
TNFRSF25-208ENST00000453341 FAM19A1Q7Z5A9 133 aa12.22□□□□□ -0.45
TNFRSF25-208ENST00000453341 SCGB3A1Q96QR1 104 aa12.22□□□□□ -0.45
TNFRSF25-208ENST00000453341 TIMM17AQ99595 171 aa12.22□□□□□ -0.45
TNFRSF25-208ENST00000453341 LINC01546A6NGU7 62 aa12.21□□□□□ -0.45
TNFRSF25-208ENST00000453341 TMEM238C9JI98 176 aa12.21□□□□□ -0.45
TNFRSF25-208ENST00000453341 SMIM1B2RUZ4 78 aa12.2□□□□□ -0.46
TNFRSF25-208ENST00000453341 RAB5BP61020 215 aa12.2□□□□□ -0.46
TNFRSF25-208ENST00000453341 ERASQ7Z444 233 aa12.2□□□□□ -0.46
TNFRSF25-208ENST00000453341 TMEM126AQ9H061 195 aa12.2□□□□□ -0.46
TNFRSF25-208ENST00000453341 SNAPINO95295 136 aa12.19□□□□□ -0.46
TNFRSF25-208ENST00000453341 PAPPA-AS1Q5QFB9 102 aa12.19□□□□□ -0.46
TNFRSF25-208ENST00000453341 FA2HQ7L5A8 372 aa12.19□□□□□ -0.46
TNFRSF25-208ENST00000453341 GEMIN7Q9H840 131 aaKnown RBP12.19□□□□□ -0.46
TNFRSF25-208ENST00000453341 TRAPPC1Q9Y5R8 145 aa12.19□□□□□ -0.46
TNFRSF25-208ENST00000453341 SEC11AP67812 179 aa12.18□□□□□ -0.46
TNFRSF25-208ENST00000453341 NDUFA5Q16718 116 aa12.18□□□□□ -0.46
TNFRSF25-208ENST00000453341 SVBPQ8N300 66 aa12.18□□□□□ -0.46
TNFRSF25-208ENST00000453341 COX7B2Q8TF08 81 aa12.18□□□□□ -0.46
TNFRSF25-208ENST00000453341 SMCO4Q9NRQ5 59 aa12.17□□□□□ -0.46
TNFRSF25-208ENST00000453341 M0R378 163 aa12.16□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 75.2 ms