RNA–Protein interactions for RNA: ENST00000453285.1

SDC4P-201, Transcript of syndecan 4 pseudogene, humanhuman

BASIC

Gene SDC4P, Length 601 nt, Biotype processed pseudogene, Subcellular localisation Exosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC4P-201ENST00000453285 TM2D2Q9BX73 214 aa3.97□□□□□ -1.77
SDC4P-201ENST00000453285 DNAH10Q8IVF4 4471 aa3.96□□□□□ -1.78
SDC4P-201ENST00000453285 C3orf84H3BNL1 204 aa3.96□□□□□ -1.78
SDC4P-201ENST00000453285 PRSS2P07478 247 aa3.96□□□□□ -1.78
SDC4P-201ENST00000453285 SPAG11BQ08648 103 aa3.96□□□□□ -1.78
SDC4P-201ENST00000453285 C2orf82Q6UX34 121 aa3.96□□□□□ -1.78
SDC4P-201ENST00000453285 CEND1Q8N111 149 aa3.96□□□□□ -1.78
SDC4P-201ENST00000453285 RMI2Q96E14 147 aa3.96□□□□□ -1.78
SDC4P-201ENST00000453285 LINC00526Q96FQ7 95 aa3.96□□□□□ -1.78
SDC4P-201ENST00000453285 SPANXDQ9BXN6 97 aa3.96□□□□□ -1.78
SDC4P-201ENST00000453285 SPANXCQ9NY87 97 aa3.96□□□□□ -1.78
SDC4P-201ENST00000453285 BIRC6Q9NR09 4857 aa3.96□□□□□ -1.78
SDC4P-201ENST00000453285 ALMS1Q8TCU4 4167 aa3.95□□□□□ -1.78
SDC4P-201ENST00000453285 GVQW2A0A096LPI5 108 aaPredicted RBP3.95□□□□□ -1.78
SDC4P-201ENST00000453285 EIF4EBP3O60516 100 aaPredicted RBP3.95□□□□□ -1.78
SDC4P-201ENST00000453285 SMIM13P0DJ93 91 aa3.95□□□□□ -1.78
SDC4P-201ENST00000453285 CXCL5P42830 114 aa3.95□□□□□ -1.78
SDC4P-201ENST00000453285 FXYD2P54710 66 aa3.95□□□□□ -1.78
SDC4P-201ENST00000453285 HIGD2BQ4VC39 106 aa3.95□□□□□ -1.78
SDC4P-201ENST00000453285 TTC32Q5I0X7 151 aa3.95□□□□□ -1.78
SDC4P-201ENST00000453285 C10orf25Q5T742 122 aa3.95□□□□□ -1.78
SDC4P-201ENST00000453285 CFAP161Q6P656 301 aa3.95□□□□□ -1.78
SDC4P-201ENST00000453285 SFTA2Q6UW10 78 aa3.95□□□□□ -1.78
SDC4P-201ENST00000453285 UNQ6190/PRO20217Q6UXQ8 127 aa3.95□□□□□ -1.78
SDC4P-201ENST00000453285 Q6ZR54 194 aa3.95□□□□□ -1.78
SDC4P-201ENST00000453285 Q6ZRN7 208 aaPredicted RBP3.95□□□□□ -1.78
SDC4P-201ENST00000453285 HIST1H4GQ99525 98 aa3.95□□□□□ -1.78
SDC4P-201ENST00000453285 KMT2AQ03164 3969 aa3.95□□□□□ -1.78
SDC4P-201ENST00000453285 A0A0U1RRA0 63 aa3.94□□□□□ -1.78
SDC4P-201ENST00000453285 TMEM238C9JI98 176 aa3.94□□□□□ -1.78
SDC4P-201ENST00000453285 USP17L23D6RBM5 183 aa3.94□□□□□ -1.78
SDC4P-201ENST00000453285 SLPIP03973 132 aa3.94□□□□□ -1.78
SDC4P-201ENST00000453285 GCSHP23434 173 aa3.94□□□□□ -1.78
SDC4P-201ENST00000453285 PTTG1IPP53801 180 aa3.94□□□□□ -1.78
SDC4P-201ENST00000453285 CKS1BP61024 79 aa3.94□□□□□ -1.78
SDC4P-201ENST00000453285 SRSF9Q13242 221 aaKnown RBP eCLIP3.94□□□□□ -1.78
SDC4P-201ENST00000453285 WFDC2Q14508 124 aa3.94□□□□□ -1.78
SDC4P-201ENST00000453285 BATFQ16520 125 aa3.94□□□□□ -1.78
SDC4P-201ENST00000453285 MEIG1Q5JSS6 88 aa3.94□□□□□ -1.78
SDC4P-201ENST00000453285 SOSTDC1Q6X4U4 206 aa3.94□□□□□ -1.78
SDC4P-201ENST00000453285 Q6ZVH6 145 aa3.94□□□□□ -1.78
SDC4P-201ENST00000453285 MUSTN1Q8IVN3 82 aa3.94□□□□□ -1.78
SDC4P-201ENST00000453285 DAND5Q8N907 189 aa3.94□□□□□ -1.78
SDC4P-201ENST00000453285 LINC00476Q8WZB0 136 aa3.94□□□□□ -1.78
SDC4P-201ENST00000453285 C2orf48Q96LS8 159 aa3.94□□□□□ -1.78
SDC4P-201ENST00000453285 C6orf48Q9UBA6 75 aa3.94□□□□□ -1.78
SDC4P-201ENST00000453285 ERG28Q9UKR5 140 aa3.94□□□□□ -1.78
SDC4P-201ENST00000453285 COX11Q9Y6N1 276 aa3.94□□□□□ -1.78
SDC4P-201ENST00000453285 A0A1B0GWB2 263 aa3.93□□□□□ -1.78
SDC4P-201ENST00000453285 F8WDY8 70 aa3.93□□□□□ -1.78
SDC4P-201ENST00000453285 ZNF561-AS1K7EIQ3 104 aa3.93□□□□□ -1.78
SDC4P-201ENST00000453285 M0R2N4 97 aa3.93□□□□□ -1.78
SDC4P-201ENST00000453285 IFITM1P13164 125 aa3.93□□□□□ -1.78
SDC4P-201ENST00000453285 CIRBPQ14011 172 aaKnown RBP3.93□□□□□ -1.78
SDC4P-201ENST00000453285 C9orf116Q5BN46 136 aaPredicted RBP3.93□□□□□ -1.78
SDC4P-201ENST00000453285 Q6ZRU5 148 aa3.93□□□□□ -1.78
SDC4P-201ENST00000453285 LINC00308Q8TCZ7 52 aa3.93□□□□□ -1.78
SDC4P-201ENST00000453285 PPDPFQ9H3Y8 114 aa3.93□□□□□ -1.78
SDC4P-201ENST00000453285 DNAH2Q9P225 4427 aa3.92□□□□□ -1.78
SDC4P-201ENST00000453285 LOC107984156A0A0G2JMH3 177 aa3.92□□□□□ -1.78
SDC4P-201ENST00000453285 TRBV30A0A0K0K1B3 111 aa3.92□□□□□ -1.78
SDC4P-201ENST00000453285 A4D1N5 150 aa3.92□□□□□ -1.78
SDC4P-201ENST00000453285 LRCOL1A6NCL2 159 aa3.92□□□□□ -1.78
SDC4P-201ENST00000453285 LY6G6CO95867 125 aa3.92□□□□□ -1.78
SDC4P-201ENST00000453285 PFN2P35080 140 aa3.92□□□□□ -1.78
SDC4P-201ENST00000453285 LINC00158P58513 81 aa3.92□□□□□ -1.78
SDC4P-201ENST00000453285 NPC2P61916 151 aa3.92□□□□□ -1.78
SDC4P-201ENST00000453285 COX17Q14061 63 aa3.92□□□□□ -1.78
SDC4P-201ENST00000453285 LBHQ53QV2 105 aaPredicted RBP3.92□□□□□ -1.78
SDC4P-201ENST00000453285 ARL17AQ8IVW1 177 aa3.92□□□□□ -1.78
SDC4P-201ENST00000453285 MIR7-3HGQ8N6C7 128 aa3.92□□□□□ -1.78
SDC4P-201ENST00000453285 CAMK2N2Q96S95 79 aa3.92□□□□□ -1.78
SDC4P-201ENST00000453285 KMT2CQ8NEZ4 4911 aaKnown RBP3.92□□□□□ -1.78
SDC4P-201ENST00000453285 TAX1BP3O14907 124 aa3.91□□□□□ -1.78
SDC4P-201ENST00000453285 LECT2O14960 151 aa3.91□□□□□ -1.78
SDC4P-201ENST00000453285 CFC1BP0CG36 223 aa3.91□□□□□ -1.78
SDC4P-201ENST00000453285 CFC1P0CG37 223 aa3.91□□□□□ -1.78
SDC4P-201ENST00000453285 SYCNQ0VAF6 134 aa3.91□□□□□ -1.78
SDC4P-201ENST00000453285 COL5A1-AS1Q5SY13 56 aa3.91□□□□□ -1.78
SDC4P-201ENST00000453285 NHP2Q9NX24 153 aaKnown RBP3.91□□□□□ -1.78
SDC4P-201ENST00000453285 DNAH17Q9UFH2 4485 aa3.9□□□□□ -1.79
SDC4P-201ENST00000453285 A6NDN8 102 aa3.9□□□□□ -1.79
SDC4P-201ENST00000453285 K7ERJ3 54 aa3.9□□□□□ -1.79
SDC4P-201ENST00000453285 PSCAO43653 123 aa3.9□□□□□ -1.79
SDC4P-201ENST00000453285 RPL24P83731 157 aaKnown RBP3.9□□□□□ -1.79
SDC4P-201ENST00000453285 RNF151Q2KHN1 245 aa3.9□□□□□ -1.79
SDC4P-201ENST00000453285 SND1-IT1Q9HBX3 110 aa3.9□□□□□ -1.79
SDC4P-201ENST00000453285 A0A0B4J2C4 111 aa3.89□□□□□ -1.79
SDC4P-201ENST00000453285 TMEM238LA0A1B0GVL6 79 aa3.89□□□□□ -1.79
SDC4P-201ENST00000453285 A6NJY4 79 aa3.89□□□□□ -1.79
SDC4P-201ENST00000453285 TLX1NBP0CAT3 122 aa3.89□□□□□ -1.79
SDC4P-201ENST00000453285 C4orf48Q5BLP8 95 aa3.89□□□□□ -1.79
SDC4P-201ENST00000453285 Q8NDZ9 215 aa3.89□□□□□ -1.79
SDC4P-201ENST00000453285 CARD19Q96LW7 228 aa3.89□□□□□ -1.79
SDC4P-201ENST00000453285 PCLOQ9Y6V0 5065 aa3.89□□□□□ -1.79
SDC4P-201ENST00000453285 HYDINQ4G0P3 5121 aa3.88□□□□□ -1.79
SDC4P-201ENST00000453285 SACSQ9NZJ4 4579 aa3.88□□□□□ -1.79
SDC4P-201ENST00000453285 EPPK1P58107 5090 aaKnown RBP3.88□□□□□ -1.79
SDC4P-201ENST00000453285 FRAS1Q86XX4 4008 aa3.88□□□□□ -1.79
SDC4P-201ENST00000453285 IGKV2-28A0A075B6P5 120 aa3.88□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 62.3 ms