RNA–Protein interactions for RNA: ENST00000452047.1

CPSF4-208, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 3

Gene CPSF4, Length 687 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-208ENST00000452047 TMEM141Q96I45 108 aa7.71□□□□□ -1.18
CPSF4-208ENST00000452047 UBR4Q5T4S7 5183 aa7.71□□□□□ -1.18
CPSF4-208ENST00000452047 TSTD3H0UI37 97 aa7.7□□□□□ -1.18
CPSF4-208ENST00000452047 MT-ND6P03923 174 aa7.7□□□□□ -1.18
CPSF4-208ENST00000452047 TLX1NBP0CAT3 122 aa7.7□□□□□ -1.18
CPSF4-208ENST00000452047 KIAA0087Q14695 138 aa7.7□□□□□ -1.18
CPSF4-208ENST00000452047 UNQ6190/PRO20217Q6UXQ8 127 aa7.7□□□□□ -1.18
CPSF4-208ENST00000452047 LINC00173Q6ZV60 143 aa7.7□□□□□ -1.18
CPSF4-208ENST00000452047 C6orf48Q9UBA6 75 aa7.7□□□□□ -1.18
CPSF4-208ENST00000452047 TRAPPC1Q9Y5R8 145 aa7.7□□□□□ -1.18
CPSF4-208ENST00000452047 UBE2D1P51668 147 aa7.69□□□□□ -1.18
CPSF4-208ENST00000452047 C2orf66Q6UXQ4 117 aa7.69□□□□□ -1.18
CPSF4-208ENST00000452047 TEX43Q6ZNM6 134 aa7.69□□□□□ -1.18
CPSF4-208ENST00000452047 CYSLTR1Q9Y271 337 aa7.69□□□□□ -1.18
CPSF4-208ENST00000452047 K7EMI3 77 aa7.68□□□□□ -1.18
CPSF4-208ENST00000452047 ORMDL2Q53FV1 153 aa7.68□□□□□ -1.18
CPSF4-208ENST00000452047 PDZD11Q5EBL8 140 aa7.68□□□□□ -1.18
CPSF4-208ENST00000452047 ZC2HC1BQ5TFG8 222 aa7.68□□□□□ -1.18
CPSF4-208ENST00000452047 AMELXQ99217 191 aa7.68□□□□□ -1.18
CPSF4-208ENST00000452047 GNB1LQ9BYB4 327 aa7.68□□□□□ -1.18
CPSF4-208ENST00000452047 PSORS1C2Q9UIG4 136 aa7.68□□□□□ -1.18
CPSF4-208ENST00000452047 IGIPA6NJ69 53 aa7.67□□□□□ -1.18
CPSF4-208ENST00000452047 NPSP0C0P6 89 aa7.67□□□□□ -1.18
CPSF4-208ENST00000452047 REG3GQ6UW15 175 aa7.67□□□□□ -1.18
CPSF4-208ENST00000452047 PHF5AQ7RTV0 110 aaKnown RBP7.67□□□□□ -1.18
CPSF4-208ENST00000452047 C2orf88Q9BSF0 95 aa7.67□□□□□ -1.18
CPSF4-208ENST00000452047 FAM168BA1KXE4 195 aa7.66□□□□□ -1.18
CPSF4-208ENST00000452047 KRTAP10-8P60410 259 aa7.66□□□□□ -1.18
CPSF4-208ENST00000452047 LBHQ53QV2 105 aaPredicted RBP7.66□□□□□ -1.18
CPSF4-208ENST00000452047 Q6ZN92 141 aa7.66□□□□□ -1.18
CPSF4-208ENST00000452047 LINC01561Q8N1V8 128 aa7.66□□□□□ -1.18
CPSF4-208ENST00000452047 NXT2Q9NPJ8 142 aaKnown RBP7.66□□□□□ -1.18
CPSF4-208ENST00000452047 TRBV30A0A0K0K1B3 111 aa7.65□□□□□ -1.18
CPSF4-208ENST00000452047 ODF1Q14990 250 aa7.65□□□□□ -1.18
CPSF4-208ENST00000452047 C2orf82Q6UX34 121 aa7.65□□□□□ -1.18
CPSF4-208ENST00000452047 FAM19A3Q7Z5A8 133 aa7.65□□□□□ -1.18
CPSF4-208ENST00000452047 VCX2Q9H322 139 aa7.65□□□□□ -1.18
CPSF4-208ENST00000452047 LRP2P98164 4655 aa7.64□□□□□ -1.19
CPSF4-208ENST00000452047 DDTP30046 118 aa7.64□□□□□ -1.19
CPSF4-208ENST00000452047 KRTAP7-1Q8IUC3 87 aa7.64□□□□□ -1.19
CPSF4-208ENST00000452047 NDUFC2-KCTD14E9PQ53 114 aa7.63□□□□□ -1.19
CPSF4-208ENST00000452047 KIAA1644Q3SXP7 199 aa7.63□□□□□ -1.19
CPSF4-208ENST00000452047 GAGE2EQ4V326 116 aa7.63□□□□□ -1.19
CPSF4-208ENST00000452047 C1orf137Q5JT78 98 aa7.63□□□□□ -1.19
CPSF4-208ENST00000452047 KRTAP11-1Q8IUC1 163 aa7.63□□□□□ -1.19
CPSF4-208ENST00000452047 TIMM17AQ99595 171 aa7.63□□□□□ -1.19
CPSF4-208ENST00000452047 MRPL18Q9H0U6 180 aaKnown RBP7.63□□□□□ -1.19
CPSF4-208ENST00000452047 GAGE2DQ9UEU5 116 aa7.63□□□□□ -1.19
CPSF4-208ENST00000452047 FAM19A5Q7Z5A7 132 aaPredicted RBP7.62□□□□□ -1.19
CPSF4-208ENST00000452047 TOMM6Q96B49 74 aa7.62□□□□□ -1.19
CPSF4-208ENST00000452047 G0S2P27469 103 aa7.61□□□□□ -1.19
CPSF4-208ENST00000452047 HERVK_113P63121 156 aa7.61□□□□□ -1.19
CPSF4-208ENST00000452047 PAPPA-AS1Q5QFB9 102 aa7.61□□□□□ -1.19
CPSF4-208ENST00000452047 C9orf129Q5T035 196 aaKnown RBP7.61□□□□□ -1.19
CPSF4-208ENST00000452047 Q8IZM0 81 aa7.61□□□□□ -1.19
CPSF4-208ENST00000452047 CDKN2A-AS1Q9UH64 79 aa7.61□□□□□ -1.19
CPSF4-208ENST00000452047 IGLV7-43P04211 117 aa7.6□□□□□ -1.19
CPSF4-208ENST00000452047 SEC11AP67812 179 aa7.6□□□□□ -1.19
CPSF4-208ENST00000452047 ERASQ7Z444 233 aa7.6□□□□□ -1.19
CPSF4-208ENST00000452047 C14orf144Q96I85 54 aa7.6□□□□□ -1.19
CPSF4-208ENST00000452047 TOMM7Q9P0U1 55 aa7.6□□□□□ -1.19
CPSF4-208ENST00000452047 LINC01546A6NGU7 62 aa7.59□□□□□ -1.19
CPSF4-208ENST00000452047 M0QXV9 152 aa7.59□□□□□ -1.19
CPSF4-208ENST00000452047 PRSS2P07478 247 aa7.59□□□□□ -1.19
CPSF4-208ENST00000452047 BAGE3Q86Y29 109 aa7.59□□□□□ -1.19
CPSF4-208ENST00000452047 ALKBH7Q9BT30 221 aaPredicted RBP7.59□□□□□ -1.19
CPSF4-208ENST00000452047 CKS1BP61024 79 aa7.58□□□□□ -1.2
CPSF4-208ENST00000452047 C6orf226Q5I0X4 101 aa7.58□□□□□ -1.2
CPSF4-208ENST00000452047 SCGB3A1Q96QR1 104 aa7.58□□□□□ -1.2
CPSF4-208ENST00000452047 GEMIN7Q9H840 131 aaKnown RBP7.58□□□□□ -1.2
CPSF4-208ENST00000452047 SERF1AO75920 110 aa7.57□□□□□ -1.2
CPSF4-208ENST00000452047 SCGB1D1O95968 90 aa7.57□□□□□ -1.2
CPSF4-208ENST00000452047 LINC00310P59036 64 aa7.57□□□□□ -1.2
CPSF4-208ENST00000452047 DIRC1Q969H9 104 aa7.57□□□□□ -1.2
CPSF4-208ENST00000452047 PRO1933Q9H354 126 aa7.57□□□□□ -1.2
CPSF4-208ENST00000452047 IGLV5-45A0A087WSX0 123 aa7.56□□□□□ -1.2
CPSF4-208ENST00000452047 SMIM1B2RUZ4 78 aa7.56□□□□□ -1.2
CPSF4-208ENST00000452047 F8VRH5 84 aa7.56□□□□□ -1.2
CPSF4-208ENST00000452047 H0Y9J4 135 aa7.56□□□□□ -1.2
CPSF4-208ENST00000452047 TINCRA0A1B0GVN0 87 aa7.55□□□□□ -1.2
CPSF4-208ENST00000452047 LINC01549A6NIU2 74 aa7.55□□□□□ -1.2
CPSF4-208ENST00000452047 NUPR1O60356 82 aa7.55□□□□□ -1.2
CPSF4-208ENST00000452047 UBE2BP63146 152 aa7.55□□□□□ -1.2
CPSF4-208ENST00000452047 LINC00469Q8N7U9 141 aa7.55□□□□□ -1.2
CPSF4-208ENST00000452047 CXCL5P42830 114 aa7.54□□□□□ -1.2
CPSF4-208ENST00000452047 CST9LQ9H4G1 147 aa7.54□□□□□ -1.2
CPSF4-208ENST00000452047 XAGE1AQ9HD64 81 aa7.54□□□□□ -1.2
CPSF4-208ENST00000452047 KRTAP1-4P0C5Y4 121 aa7.53□□□□□ -1.2
CPSF4-208ENST00000452047 A0A096LNJ9 63 aa7.52□□□□□ -1.21
CPSF4-208ENST00000452047 PMVKQ15126 192 aa7.52□□□□□ -1.21
CPSF4-208ENST00000452047 FA2HQ7L5A8 372 aa7.52□□□□□ -1.21
CPSF4-208ENST00000452047 PRR26Q8N8Z3 221 aa7.52□□□□□ -1.21
CPSF4-208ENST00000452047 C18orf32Q8TCD1 76 aa7.52□□□□□ -1.21
CPSF4-208ENST00000452047 VAMP8Q9BV40 100 aa7.52□□□□□ -1.21
CPSF4-208ENST00000452047 C22orf24Q9Y442 160 aa7.52□□□□□ -1.21
CPSF4-208ENST00000452047 C20orf202A1L168 122 aa7.51□□□□□ -1.21
CPSF4-208ENST00000452047 M0R143 59 aa7.51□□□□□ -1.21
CPSF4-208ENST00000452047 COX7B2Q8TF08 81 aa7.51□□□□□ -1.21
CPSF4-208ENST00000452047 MIEN1Q9BRT3 115 aa7.51□□□□□ -1.21
CPSF4-208ENST00000452047 TP73-AS1Q9UF72 201 aa7.51□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms