RNA–Protein interactions for RNA: ENST00000451070.1

LINC01238-204, Transcript of long intergenic non-protein coding RNA 1238, humanhuman

TSL 4

Gene LINC01238, Length 599 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01238-204ENST00000451070 SDIM1Q6ZPB5 146 aa6.34□□□□□ -1.39
LINC01238-204ENST00000451070 TMEM136Q6ZRR5 245 aa6.34□□□□□ -1.39
LINC01238-204ENST00000451070 C20orf203Q8NBC4 194 aa6.34□□□□□ -1.39
LINC01238-204ENST00000451070 GFRA4Q9GZZ7 299 aa6.34□□□□□ -1.39
LINC01238-204ENST00000451070 IGLV4-60A0A075B6I1 120 aa6.33□□□□□ -1.4
LINC01238-204ENST00000451070 E9PLD3 99 aa6.33□□□□□ -1.4
LINC01238-204ENST00000451070 APOMO95445 188 aa6.33□□□□□ -1.4
LINC01238-204ENST00000451070 REG3AQ06141 175 aa6.33□□□□□ -1.4
LINC01238-204ENST00000451070 PPDPFLQ8WWR9 84 aa6.33□□□□□ -1.4
LINC01238-204ENST00000451070 C20orf78Q9BR46 151 aa6.33□□□□□ -1.4
LINC01238-204ENST00000451070 PRO0461Q9UI25 63 aa6.33□□□□□ -1.4
LINC01238-204ENST00000451070 TRBV20OR9-2A0A075B6H5 130 aa6.32□□□□□ -1.4
LINC01238-204ENST00000451070 A0A1B0GUV1 79 aa6.32□□□□□ -1.4
LINC01238-204ENST00000451070 TINCRA0A1B0GVN0 87 aa6.32□□□□□ -1.4
LINC01238-204ENST00000451070 H3BS24 57 aa6.32□□□□□ -1.4
LINC01238-204ENST00000451070 H7C1H1 209 aa6.32□□□□□ -1.4
LINC01238-204ENST00000451070 SLPIP03973 132 aa6.32□□□□□ -1.4
LINC01238-204ENST00000451070 CNBPP62633 177 aaKnown RBP6.32□□□□□ -1.4
LINC01238-204ENST00000451070 CACNG7P62955 275 aa6.32□□□□□ -1.4
LINC01238-204ENST00000451070 CIRBPQ14011 172 aaKnown RBP6.32□□□□□ -1.4
LINC01238-204ENST00000451070 ETDBQ3ZM63 59 aa6.32□□□□□ -1.4
LINC01238-204ENST00000451070 AP5S1Q9NUS5 200 aa6.32□□□□□ -1.4
LINC01238-204ENST00000451070 TRAV8-4A0A0B4J246 113 aa6.31□□□□□ -1.4
LINC01238-204ENST00000451070 HSBP1O75506 76 aa6.31□□□□□ -1.4
LINC01238-204ENST00000451070 P01737 135 aa6.31□□□□□ -1.4
LINC01238-204ENST00000451070 APCSP02743 223 aa6.31□□□□□ -1.4
LINC01238-204ENST00000451070 ATOH7Q8N100 152 aa6.31□□□□□ -1.4
LINC01238-204ENST00000451070 PRELID3AQ96N28 172 aa6.31□□□□□ -1.4
LINC01238-204ENST00000451070 TMEM243Q9BU79 118 aa6.31□□□□□ -1.4
LINC01238-204ENST00000451070 HIGD1BQ9P298 99 aa6.31□□□□□ -1.4
LINC01238-204ENST00000451070 hDV102S1A0JD36 115 aa6.3□□□□□ -1.4
LINC01238-204ENST00000451070 F2Z2F3 143 aa6.3□□□□□ -1.4
LINC01238-204ENST00000451070 MT1HL1P0DM35 61 aa6.3□□□□□ -1.4
LINC01238-204ENST00000451070 LYZL1Q6UWQ5 148 aa6.3□□□□□ -1.4
LINC01238-204ENST00000451070 CHCHD1Q96BP2 118 aaKnown RBP6.3□□□□□ -1.4
LINC01238-204ENST00000451070 PGLYRP4Q96LB8 373 aa6.3□□□□□ -1.4
LINC01238-204ENST00000451070 PLA2G2DQ9UNK4 145 aa6.3□□□□□ -1.4
LINC01238-204ENST00000451070 SNCGO76070 127 aa6.29□□□□□ -1.4
LINC01238-204ENST00000451070 CHTF8P0CG12 524 aa6.29□□□□□ -1.4
LINC01238-204ENST00000451070 OCC1Q8TAD7 63 aa6.29□□□□□ -1.4
LINC01238-204ENST00000451070 DPH3P1Q9H4G8 78 aa6.29□□□□□ -1.4
LINC01238-204ENST00000451070 A0A1B0GWB2 263 aa6.28□□□□□ -1.4
LINC01238-204ENST00000451070 ZNF561-AS1K7EIQ3 104 aa6.28□□□□□ -1.4
LINC01238-204ENST00000451070 FGF6P10767 208 aa6.28□□□□□ -1.4
LINC01238-204ENST00000451070 LINC01545Q5VT33 79 aa6.28□□□□□ -1.4
LINC01238-204ENST00000451070 C15orf56Q8N910 161 aa6.28□□□□□ -1.4
LINC01238-204ENST00000451070 NAA38Q9BRA0 125 aaKnown RBP6.28□□□□□ -1.4
LINC01238-204ENST00000451070 CNFNQ9BYD5 112 aa6.28□□□□□ -1.4
LINC01238-204ENST00000451070 IGHV3-64A0A075B6Q5 118 aa6.27□□□□□ -1.41
LINC01238-204ENST00000451070 A0A087WYN8 130 aa6.27□□□□□ -1.41
LINC01238-204ENST00000451070 TAL2Q16559 108 aa6.27□□□□□ -1.41
LINC01238-204ENST00000451070 GATD1Q8NB37 220 aa6.27□□□□□ -1.41
LINC01238-204ENST00000451070 SPACA4Q8TDM5 124 aa6.27□□□□□ -1.41
LINC01238-204ENST00000451070 TRAV16A0A0A6YYK6 109 aaPredicted RBP6.26□□□□□ -1.41
LINC01238-204ENST00000451070 TRAV26-2A0A0B4J265 109 aa6.26□□□□□ -1.41
LINC01238-204ENST00000451070 K7EN84 100 aa6.26□□□□□ -1.41
LINC01238-204ENST00000451070 UBE2L6O14933 153 aa6.26□□□□□ -1.41
LINC01238-204ENST00000451070 UQCRQO14949 82 aa6.26□□□□□ -1.41
LINC01238-204ENST00000451070 CAMPP49913 170 aa6.26□□□□□ -1.41
LINC01238-204ENST00000451070 Q6ZRU5 148 aa6.26□□□□□ -1.41
LINC01238-204ENST00000451070 TEN1Q86WV5 123 aa6.26□□□□□ -1.41
LINC01238-204ENST00000451070 RNF185Q96GF1 192 aa6.26□□□□□ -1.41
LINC01238-204ENST00000451070 TWIST1Q15672 202 aa6.25□□□□□ -1.41
LINC01238-204ENST00000451070 LYRM7Q5U5X0 104 aa6.25□□□□□ -1.41
LINC01238-204ENST00000451070 FAM19A2Q8N3H0 131 aa6.25□□□□□ -1.41
LINC01238-204ENST00000451070 C3orf22Q8N5N4 141 aa6.25□□□□□ -1.41
LINC01238-204ENST00000451070 RPL39LQ96EH5 51 aaKnown RBP6.25□□□□□ -1.41
LINC01238-204ENST00000451070 LINC00526Q96FQ7 95 aa6.25□□□□□ -1.41
LINC01238-204ENST00000451070 KIR2DL4Q99706 377 aa6.25□□□□□ -1.41
LINC01238-204ENST00000451070 IMUPQ9GZP8 106 aa6.25□□□□□ -1.41
LINC01238-204ENST00000451070 RNASE7Q9H1E1 156 aaKnown RBP6.25□□□□□ -1.41
LINC01238-204ENST00000451070 RPP21Q9H633 154 aaKnown RBP6.25□□□□□ -1.41
LINC01238-204ENST00000451070 PLAC8Q9NZF1 115 aa6.25□□□□□ -1.41
LINC01238-204ENST00000451070 TNXBP22105 4242 aa6.24□□□□□ -1.41
LINC01238-204ENST00000451070 IGKV3OR2-268A0A0C4DH90 116 aa6.24□□□□□ -1.41
LINC01238-204ENST00000451070 NCR2O95944 276 aa6.24□□□□□ -1.41
LINC01238-204ENST00000451070 FOXA3P55318 350 aaPredicted RBP6.24□□□□□ -1.41
LINC01238-204ENST00000451070 COX6A2Q02221 97 aa6.24□□□□□ -1.41
LINC01238-204ENST00000451070 HIGD2BQ4VC39 106 aa6.24□□□□□ -1.41
LINC01238-204ENST00000451070 NUP35Q8NFH5 326 aa6.24□□□□□ -1.41
LINC01238-204ENST00000451070 PRSS3P2Q8NHM4 247 aa6.24□□□□□ -1.41
LINC01238-204ENST00000451070 RAB37Q96AX2 223 aa6.24□□□□□ -1.41
LINC01238-204ENST00000451070 DPH3Q96FX2 82 aa6.24□□□□□ -1.41
LINC01238-204ENST00000451070 OSTCQ9NRP0 149 aa6.24□□□□□ -1.41
LINC01238-204ENST00000451070 IGKV2D-29A0A075B6S2 120 aaPredicted RBP6.23□□□□□ -1.41
LINC01238-204ENST00000451070 A0A0U1RRA0 63 aa6.23□□□□□ -1.41
LINC01238-204ENST00000451070 LOC107984640A0A0U1RRK4 108 aa6.23□□□□□ -1.41
LINC01238-204ENST00000451070 IGKV2-29A2NJV5 120 aaPredicted RBP6.23□□□□□ -1.41
LINC01238-204ENST00000451070 LEPROTL1O95214 131 aa6.23□□□□□ -1.41
LINC01238-204ENST00000451070 NMUP48645 174 aa6.23□□□□□ -1.41
LINC01238-204ENST00000451070 HERVK_113P63121 156 aa6.23□□□□□ -1.41
LINC01238-204ENST00000451070 CHCHD10Q8WYQ3 142 aaPredicted RBP6.23□□□□□ -1.41
LINC01238-204ENST00000451070 LINC01600Q96MT4 127 aa6.23□□□□□ -1.41
LINC01238-204ENST00000451070 TRBV20-1A0A075B6N2 111 aa6.22□□□□□ -1.41
LINC01238-204ENST00000451070 GVQW2A0A096LPI5 108 aaPredicted RBP6.22□□□□□ -1.41
LINC01238-204ENST00000451070 SDHAF1A6NFY7 115 aa6.22□□□□□ -1.41
LINC01238-204ENST00000451070 ATP5LO75964 103 aa6.22□□□□□ -1.41
LINC01238-204ENST00000451070 IGKV2-24A0A0C4DH68 120 aa6.21□□□□□ -1.42
LINC01238-204ENST00000451070 H7C423 109 aa6.21□□□□□ -1.42
LINC01238-204ENST00000451070 GAS8-AS1O95177 125 aa6.21□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms