RNA–Protein interactions for RNA: ENST00000450066.6

USP39-207, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 2 BASIC

Gene USP39, Length 2,086 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-207ENST00000450066 MEIG1Q5JSS6 88 aa9.57□□□□□ -0.88
USP39-207ENST00000450066 K7ERJ3 54 aa9.57□□□□□ -0.88
USP39-207ENST00000450066 KRTAP26-1Q6PEX3 210 aa9.57□□□□□ -0.88
USP39-207ENST00000450066 LYSTQ99698 3801 aa9.57□□□□□ -0.88
USP39-207ENST00000450066 FBN3Q75N90 2809 aa9.56□□□□□ -0.88
USP39-207ENST00000450066 IFITM1P13164 125 aa9.56□□□□□ -0.88
USP39-207ENST00000450066 CXCL5P42830 114 aa9.55□□□□□ -0.88
USP39-207ENST00000450066 CKS1BP61024 79 aa9.55□□□□□ -0.88
USP39-207ENST00000450066 CFAP161Q6P656 301 aa9.55□□□□□ -0.88
USP39-207ENST00000450066 RAB37Q96AX2 223 aa9.55□□□□□ -0.88
USP39-207ENST00000450066 C1orf43Q9BWL3 253 aa9.55□□□□□ -0.88
USP39-207ENST00000450066 A4D1N5 150 aa9.55□□□□□ -0.88
USP39-207ENST00000450066 IBA57-AS1B1ANH7 110 aa9.55□□□□□ -0.88
USP39-207ENST00000450066 DAND5Q8N907 189 aa9.55□□□□□ -0.88
USP39-207ENST00000450066 TENM2Q9NT68 2774 aa9.55□□□□□ -0.88
USP39-207ENST00000450066 C9orf118A6NHY6 69 aa9.54□□□□□ -0.88
USP39-207ENST00000450066 A0A0U1RRA0 63 aa9.54□□□□□ -0.88
USP39-207ENST00000450066 C2orf82Q6UX34 121 aa9.54□□□□□ -0.88
USP39-207ENST00000450066 COPS9Q8WXC6 57 aa9.54□□□□□ -0.88
USP39-207ENST00000450066 CFC1BP0CG36 223 aa9.53□□□□□ -0.88
USP39-207ENST00000450066 CFC1P0CG37 223 aa9.53□□□□□ -0.88
USP39-207ENST00000450066 SPAG11BQ08648 103 aa9.53□□□□□ -0.88
USP39-207ENST00000450066 LINC00308Q8TCZ7 52 aa9.53□□□□□ -0.88
USP39-207ENST00000450066 IGKV2D-24A0A075B6R9 120 aa9.52□□□□□ -0.88
USP39-207ENST00000450066 TRAV16A0A0A6YYK6 109 aaPredicted RBP9.52□□□□□ -0.88
USP39-207ENST00000450066 PLECQ15149 4684 aaKnown RBP9.52□□□□□ -0.88
USP39-207ENST00000450066 NPC2P61916 151 aa9.52□□□□□ -0.89
USP39-207ENST00000450066 PPDPFQ9H3Y8 114 aa9.52□□□□□ -0.89
USP39-207ENST00000450066 ERG28Q9UKR5 140 aa9.52□□□□□ -0.89
USP39-207ENST00000450066 DNAH1Q9P2D7 4330 aa9.52□□□□□ -0.89
USP39-207ENST00000450066 EIF4EBP3O60516 100 aaPredicted RBP9.51□□□□□ -0.89
USP39-207ENST00000450066 Q9HAA7 133 aa9.51□□□□□ -0.89
USP39-207ENST00000450066 H3BUT2 72 aa9.51□□□□□ -0.89
USP39-207ENST00000450066 LINC00158P58513 81 aa9.51□□□□□ -0.89
USP39-207ENST00000450066 UBE2DNLQ8IWF7 75 aa9.51□□□□□ -0.89
USP39-207ENST00000450066 A0A0B4J2C4 111 aa9.5□□□□□ -0.89
USP39-207ENST00000450066 MIR7-3HGQ8N6C7 128 aa9.5□□□□□ -0.89
USP39-207ENST00000450066 STARD9Q9P2P6 4700 aa9.5□□□□□ -0.89
USP39-207ENST00000450066 PFN2P35080 140 aa9.49□□□□□ -0.89
USP39-207ENST00000450066 PRO1854Q9UHT4 67 aa9.49□□□□□ -0.89
USP39-207ENST00000450066 COX17Q14061 63 aa9.49□□□□□ -0.89
USP39-207ENST00000450066 SOSTDC1Q6X4U4 206 aa9.49□□□□□ -0.89
USP39-207ENST00000450066 C6orf223Q8N319 242 aa9.49□□□□□ -0.89
USP39-207ENST00000450066 NTN5Q8WTR8 489 aaPredicted RBP9.49□□□□□ -0.89
USP39-207ENST00000450066 RMI2Q96E14 147 aa9.49□□□□□ -0.89
USP39-207ENST00000450066 NAA38Q9BRA0 125 aaKnown RBP9.49□□□□□ -0.89
USP39-207ENST00000450066 C15orf56Q8N910 161 aa9.48□□□□□ -0.89
USP39-207ENST00000450066 A0A1W2PPM0 123 aa9.47□□□□□ -0.89
USP39-207ENST00000450066 VAMP3Q15836 100 aa9.47□□□□□ -0.89
USP39-207ENST00000450066 PGPEP1Q9NXJ5 209 aa9.47□□□□□ -0.89
USP39-207ENST00000450066 ZNF561-AS1K7EIQ3 104 aa9.47□□□□□ -0.89
USP39-207ENST00000450066 UNQ6190/PRO20217Q6UXQ8 127 aa9.47□□□□□ -0.89
USP39-207ENST00000450066 LINC00526Q96FQ7 95 aa9.47□□□□□ -0.89
USP39-207ENST00000450066 C10orf25Q5T742 122 aa9.46□□□□□ -0.89
USP39-207ENST00000450066 GVQW2A0A096LPI5 108 aaPredicted RBP9.46□□□□□ -0.9
USP39-207ENST00000450066 TSPAN13O95857 204 aa9.45□□□□□ -0.9
USP39-207ENST00000450066 FABP2P12104 132 aa9.45□□□□□ -0.9
USP39-207ENST00000450066 HIGD2BQ4VC39 106 aa9.45□□□□□ -0.9
USP39-207ENST00000450066 C9orf116Q5BN46 136 aaPredicted RBP9.44□□□□□ -0.9
USP39-207ENST00000450066 C2orf48Q96LS8 159 aa9.44□□□□□ -0.9
USP39-207ENST00000450066 KRTAP1-5Q9BYS1 174 aa9.44□□□□□ -0.9
USP39-207ENST00000450066 F8WDY8 70 aa9.44□□□□□ -0.9
USP39-207ENST00000450066 TGP01266 2768 aa9.44□□□□□ -0.9
USP39-207ENST00000450066 MUC7Q8TAX7 377 aa9.43□□□□□ -0.9
USP39-207ENST00000450066 LOC107984156A0A0G2JMH3 177 aa9.43□□□□□ -0.9
USP39-207ENST00000450066 TRBV30A0A0K0K1B3 111 aa9.43□□□□□ -0.9
USP39-207ENST00000450066 UBE2V1Q13404 147 aa9.43□□□□□ -0.9
USP39-207ENST00000450066 ARL17AQ8IVW1 177 aa9.43□□□□□ -0.9
USP39-207ENST00000450066 CAMK2N2Q96S95 79 aa9.43□□□□□ -0.9
USP39-207ENST00000450066 SND1-IT1Q9HBX3 110 aa9.43□□□□□ -0.9
USP39-207ENST00000450066 C6orf48Q9UBA6 75 aa9.42□□□□□ -0.9
USP39-207ENST00000450066 GAGE10A6NGK3 116 aa9.41□□□□□ -0.9
USP39-207ENST00000450066 CASC10Q5T4H9 136 aa9.41□□□□□ -0.9
USP39-207ENST00000450066 K7EP34 96 aa9.4□□□□□ -0.9
USP39-207ENST00000450066 TTC32Q5I0X7 151 aa9.4□□□□□ -0.9
USP39-207ENST00000450066 GTF2H5Q6ZYL4 71 aa9.4□□□□□ -0.9
USP39-207ENST00000450066 SPCS1Q9Y6A9 102 aa9.4□□□□□ -0.9
USP39-207ENST00000450066 VPS13DQ5THJ4 4388 aa9.4□□□□□ -0.91
USP39-207ENST00000450066 USP17L23D6RBM5 183 aa9.4□□□□□ -0.91
USP39-207ENST00000450066 H7C2G1 150 aa9.4□□□□□ -0.91
USP39-207ENST00000450066 Q6ZRU5 148 aa9.4□□□□□ -0.91
USP39-207ENST00000450066 NBDYA0A0U1RRE5 68 aa9.38□□□□□ -0.91
USP39-207ENST00000450066 RPL13AP40429 203 aaKnown RBP9.38□□□□□ -0.91
USP39-207ENST00000450066 Q1RN00 199 aa9.38□□□□□ -0.91
USP39-207ENST00000450066 IGKV2-28A0A075B6P5 120 aa9.38□□□□□ -0.91
USP39-207ENST00000450066 IGKV2D-28P01615 120 aa9.38□□□□□ -0.91
USP39-207ENST00000450066 SYCNQ0VAF6 134 aa9.38□□□□□ -0.91
USP39-207ENST00000450066 TRAV13-2A0A0B4J235 113 aa9.37□□□□□ -0.91
USP39-207ENST00000450066 LYRM7Q5U5X0 104 aa9.37□□□□□ -0.91
USP39-207ENST00000450066 PSMB2P49721 201 aa9.36□□□□□ -0.91
USP39-207ENST00000450066 DNAH10Q8IVF4 4471 aa9.36□□□□□ -0.91
USP39-207ENST00000450066 NDUFC2O95298 119 aa9.36□□□□□ -0.91
USP39-207ENST00000450066 LINC00337Q8N6G1 96 aa9.35□□□□□ -0.91
USP39-207ENST00000450066 WWC2-AS2Q96NR7 200 aa9.35□□□□□ -0.91
USP39-207ENST00000450066 NDUFC2-KCTD14E9PQ53 114 aa9.34□□□□□ -0.91
USP39-207ENST00000450066 PSCAO43653 123 aa9.34□□□□□ -0.91
USP39-207ENST00000450066 SCGB1C2P0DMR2 95 aa9.34□□□□□ -0.91
USP39-207ENST00000450066 RNF151Q2KHN1 245 aa9.34□□□□□ -0.91
USP39-207ENST00000450066 LECT2O14960 151 aa9.33□□□□□ -0.92
USP39-207ENST00000450066 TRIAP1O43715 76 aa9.33□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 149.3 ms