RNA–Protein interactions for RNA: ENST00000449062.1

RTFDC1-204, Transcript of Protein RTF2 homolog, humanhuman

TSL 5

Gene RTFDC1, Length 852 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1-204ENST00000449062 TINCRA0A1B0GVN0 87 aa8.69□□□□□ -1.02
RTFDC1-204ENST00000449062 FA2HQ7L5A8 372 aa8.69□□□□□ -1.02
RTFDC1-204ENST00000449062 Q8IZM0 81 aa8.69□□□□□ -1.02
RTFDC1-204ENST00000449062 FAM168BA1KXE4 195 aa8.68□□□□□ -1.02
RTFDC1-204ENST00000449062 NDUFC2-KCTD14E9PQ53 114 aa8.67□□□□□ -1.02
RTFDC1-204ENST00000449062 LINC00614P0C842 121 aa8.67□□□□□ -1.02
RTFDC1-204ENST00000449062 NDUFA5Q16718 116 aa8.67□□□□□ -1.02
RTFDC1-204ENST00000449062 C6orf226Q5I0X4 101 aa8.67□□□□□ -1.02
RTFDC1-204ENST00000449062 PHF5AQ7RTV0 110 aaKnown RBP8.67□□□□□ -1.02
RTFDC1-204ENST00000449062 KRTAP11-1Q8IUC1 163 aa8.67□□□□□ -1.02
RTFDC1-204ENST00000449062 GEMIN7Q9H840 131 aaKnown RBP8.67□□□□□ -1.02
RTFDC1-204ENST00000449062 SMIM1B2RUZ4 78 aa8.66□□□□□ -1.02
RTFDC1-204ENST00000449062 PMVKQ15126 192 aa8.66□□□□□ -1.02
RTFDC1-204ENST00000449062 GAGE2EQ4V326 116 aa8.66□□□□□ -1.02
RTFDC1-204ENST00000449062 C9orf129Q5T035 196 aaKnown RBP8.66□□□□□ -1.02
RTFDC1-204ENST00000449062 GAGE2DQ9UEU5 116 aa8.66□□□□□ -1.02
RTFDC1-204ENST00000449062 PSORS1C2Q9UIG4 136 aa8.66□□□□□ -1.02
RTFDC1-204ENST00000449062 PDZD11Q5EBL8 140 aa8.65□□□□□ -1.02
RTFDC1-204ENST00000449062 SPINK6Q6UWN8 80 aa8.65□□□□□ -1.02
RTFDC1-204ENST00000449062 PACRGQ96M98 296 aaPredicted RBP8.65□□□□□ -1.02
RTFDC1-204ENST00000449062 SMCO4Q9NRQ5 59 aa8.65□□□□□ -1.02
RTFDC1-204ENST00000449062 TOMM7Q9P0U1 55 aa8.65□□□□□ -1.02
RTFDC1-204ENST00000449062 PRSS2P07478 247 aa8.64□□□□□ -1.03
RTFDC1-204ENST00000449062 CKS1BP61024 79 aa8.64□□□□□ -1.03
RTFDC1-204ENST00000449062 LINC00469Q8N7U9 141 aa8.64□□□□□ -1.03
RTFDC1-204ENST00000449062 LINC01600Q96MT4 127 aa8.64□□□□□ -1.03
RTFDC1-204ENST00000449062 SERTAD4-AS1Q5TG53 156 aa8.63□□□□□ -1.03
RTFDC1-204ENST00000449062 F8VRH5 84 aa8.62□□□□□ -1.03
RTFDC1-204ENST00000449062 IGLC3P0DOY3 106 aa8.62□□□□□ -1.03
RTFDC1-204ENST00000449062 KRTAP10-8P60410 259 aa8.62□□□□□ -1.03
RTFDC1-204ENST00000449062 HBDP02042 147 aa8.61□□□□□ -1.03
RTFDC1-204ENST00000449062 ODF1Q14990 250 aa8.61□□□□□ -1.03
RTFDC1-204ENST00000449062 PMCHL1Q16048 86 aa8.61□□□□□ -1.03
RTFDC1-204ENST00000449062 COX7B2Q8TF08 81 aa8.61□□□□□ -1.03
RTFDC1-204ENST00000449062 IGLV5-39A0A0G2JS06 123 aa8.6□□□□□ -1.03
RTFDC1-204ENST00000449062 SPINK8P0C7L1 97 aa8.6□□□□□ -1.03
RTFDC1-204ENST00000449062 RAB5BP61020 215 aa8.6□□□□□ -1.03
RTFDC1-204ENST00000449062 FAM19A5Q7Z5A7 132 aaPredicted RBP8.6□□□□□ -1.03
RTFDC1-204ENST00000449062 CBLN2Q8IUK8 224 aa8.6□□□□□ -1.03
RTFDC1-204ENST00000449062 SLC7A5P1Q8MH63 180 aa8.6□□□□□ -1.03
RTFDC1-204ENST00000449062 CXCL5P42830 114 aa8.59□□□□□ -1.03
RTFDC1-204ENST00000449062 ZNF22P17026 224 aaPredicted RBP8.58□□□□□ -1.04
RTFDC1-204ENST00000449062 C1orf137Q5JT78 98 aa8.58□□□□□ -1.04
RTFDC1-204ENST00000449062 XAGE1AQ9HD64 81 aa8.58□□□□□ -1.04
RTFDC1-204ENST00000449062 M0QXV9 152 aa8.57□□□□□ -1.04
RTFDC1-204ENST00000449062 ATP5LO75964 103 aa8.57□□□□□ -1.04
RTFDC1-204ENST00000449062 IGLV7-43P04211 117 aa8.57□□□□□ -1.04
RTFDC1-204ENST00000449062 H3BRM9 83 aa8.56□□□□□ -1.04
RTFDC1-204ENST00000449062 NDUFA6P56556 154 aa8.56□□□□□ -1.04
RTFDC1-204ENST00000449062 REG3GQ6UW15 175 aa8.56□□□□□ -1.04
RTFDC1-204ENST00000449062 BAGE3Q86Y29 109 aa8.56□□□□□ -1.04
RTFDC1-204ENST00000449062 CHCHD1Q96BP2 118 aaKnown RBP8.56□□□□□ -1.04
RTFDC1-204ENST00000449062 C22orf24Q9Y442 160 aa8.56□□□□□ -1.04
RTFDC1-204ENST00000449062 C11orf86A6NJI1 115 aa8.55□□□□□ -1.04
RTFDC1-204ENST00000449062 COLCA2A8K830 154 aa8.53□□□□□ -1.04
RTFDC1-204ENST00000449062 TRGC2P03986 189 aa8.53□□□□□ -1.04
RTFDC1-204ENST00000449062 LINC00310P59036 64 aa8.53□□□□□ -1.04
RTFDC1-204ENST00000449062 TP73-AS1Q9UF72 201 aa8.53□□□□□ -1.04
RTFDC1-204ENST00000449062 PLA2G2DQ9UNK4 145 aa8.53□□□□□ -1.04
RTFDC1-204ENST00000449062 UBR4Q5T4S7 5183 aa8.52□□□□□ -1.04
RTFDC1-204ENST00000449062 TRAV12-1A0A0B4J245 112 aa8.52□□□□□ -1.05
RTFDC1-204ENST00000449062 UBE2BP63146 152 aa8.51□□□□□ -1.05
RTFDC1-204ENST00000449062 FAM19A2Q8N3H0 131 aa8.51□□□□□ -1.05
RTFDC1-204ENST00000449062 DIRC1Q969H9 104 aa8.51□□□□□ -1.05
RTFDC1-204ENST00000449062 IFI27L1Q96BM0 104 aa8.51□□□□□ -1.05
RTFDC1-204ENST00000449062 CHTOPQ9Y3Y2 248 aaKnown RBP8.51□□□□□ -1.05
RTFDC1-204ENST00000449062 IGLV5-37A0A075B6J1 123 aa8.5□□□□□ -1.05
RTFDC1-204ENST00000449062 LBHQ53QV2 105 aaPredicted RBP8.5□□□□□ -1.05
RTFDC1-204ENST00000449062 ZNF625Q96I27 306 aaPredicted RBP8.5□□□□□ -1.05
RTFDC1-204ENST00000449062 H0Y9J4 135 aa8.49□□□□□ -1.05
RTFDC1-204ENST00000449062 NUPR1O60356 82 aa8.49□□□□□ -1.05
RTFDC1-204ENST00000449062 KRTAP1-4P0C5Y4 121 aa8.49□□□□□ -1.05
RTFDC1-204ENST00000449062 MRPL55Q7Z7F7 128 aaKnown RBP8.49□□□□□ -1.05
RTFDC1-204ENST00000449062 LINC00167Q96N53 147 aa8.49□□□□□ -1.05
RTFDC1-204ENST00000449062 TMEM223A0PJW6 202 aa8.48□□□□□ -1.05
RTFDC1-204ENST00000449062 TMEM170BQ5T4T1 132 aa8.48□□□□□ -1.05
RTFDC1-204ENST00000449062 HSBP1O75506 76 aa8.47□□□□□ -1.05
RTFDC1-204ENST00000449062 ERG28Q9UKR5 140 aa8.47□□□□□ -1.05
RTFDC1-204ENST00000449062 LRP2P98164 4655 aa8.47□□□□□ -1.05
RTFDC1-204ENST00000449062 ZNF861PO60384 105 aa8.46□□□□□ -1.06
RTFDC1-204ENST00000449062 SERF1AO75920 110 aa8.46□□□□□ -1.06
RTFDC1-204ENST00000449062 PFN2P35080 140 aa8.46□□□□□ -1.06
RTFDC1-204ENST00000449062 COX17Q14061 63 aa8.46□□□□□ -1.06
RTFDC1-204ENST00000449062 SND1-IT1Q9HBX3 110 aa8.46□□□□□ -1.06
RTFDC1-204ENST00000449062 Q8NDZ9 215 aa8.45□□□□□ -1.06
RTFDC1-204ENST00000449062 VPREB1P12018 145 aa8.44□□□□□ -1.06
RTFDC1-204ENST00000449062 PRR26Q8N8Z3 221 aa8.44□□□□□ -1.06
RTFDC1-204ENST00000449062 RPL37AP8A6NKH3 93 aa8.43□□□□□ -1.06
RTFDC1-204ENST00000449062 SFTA2Q6UW10 78 aa8.43□□□□□ -1.06
RTFDC1-204ENST00000449062 GAGE10A6NGK3 116 aa8.42□□□□□ -1.06
RTFDC1-204ENST00000449062 BCE1O60756 84 aa8.42□□□□□ -1.06
RTFDC1-204ENST00000449062 SCO1O75880 301 aa8.42□□□□□ -1.06
RTFDC1-204ENST00000449062 LEPROTL1O95214 131 aa8.42□□□□□ -1.06
RTFDC1-204ENST00000449062 KRTAP13-1Q8IUC0 172 aa8.42□□□□□ -1.06
RTFDC1-204ENST00000449062 IGLV1-50A0A075B6I6 118 aa8.4□□□□□ -1.06
RTFDC1-204ENST00000449062 NKAPP1Q8N9T2 125 aa8.39□□□□□ -1.07
RTFDC1-204ENST00000449062 FABP4P15090 132 aa8.38□□□□□ -1.07
RTFDC1-204ENST00000449062 RPL28P46779 137 aaKnown RBP8.38□□□□□ -1.07
RTFDC1-204ENST00000449062 HIST1H2BKO60814 126 aa8.37□□□□□ -1.07
RTFDC1-204ENST00000449062 HIST1H2BJP06899 126 aa8.37□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 97.9 ms