RNA–Protein interactions for RNA: ENST00000448404.5

SF1-211, Transcript of splicing factor 1, humanhuman

TSL 1 (best)

Gene SF1, Length 2,778 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-211ENST00000448404 ICOSQ9Y6W8 199 aa10.29□□□□□ -0.76
SF1-211ENST00000448404 TRAV16A0A0A6YYK6 109 aaPredicted RBP10.29□□□□□ -0.76
SF1-211ENST00000448404 PFN2P35080 140 aa10.29□□□□□ -0.76
SF1-211ENST00000448404 PPDPFQ9H3Y8 114 aa10.28□□□□□ -0.76
SF1-211ENST00000448404 RETNQ9HD89 108 aa10.28□□□□□ -0.76
SF1-211ENST00000448404 C9orf66Q5T8R8 295 aa10.28□□□□□ -0.76
SF1-211ENST00000448404 H7C423 109 aa10.27□□□□□ -0.76
SF1-211ENST00000448404 NBEAL1Q6ZS30 2694 aa10.27□□□□□ -0.77
SF1-211ENST00000448404 PAX4O43316 350 aa10.26□□□□□ -0.77
SF1-211ENST00000448404 MIR7-3HGQ8N6C7 128 aa10.26□□□□□ -0.77
SF1-211ENST00000448404 IGHV3OR16-9A0A0B4J2B5 98 aa10.25□□□□□ -0.77
SF1-211ENST00000448404 IGHV4-30-4P0DP06 118 aa10.25□□□□□ -0.77
SF1-211ENST00000448404 CIRBPQ14011 172 aaKnown RBP10.25□□□□□ -0.77
SF1-211ENST00000448404 KIR2DL5BQ8NHK3 375 aa10.25□□□□□ -0.77
SF1-211ENST00000448404 COX7B2Q8TF08 81 aa10.25□□□□□ -0.77
SF1-211ENST00000448404 LINC00526Q96FQ7 95 aa10.25□□□□□ -0.77
SF1-211ENST00000448404 TRBV30A0A0K0K1B3 111 aa10.24□□□□□ -0.77
SF1-211ENST00000448404 LINC00959A0A1B0GUT2 108 aa10.24□□□□□ -0.77
SF1-211ENST00000448404 LINC00269Q8N2A0 174 aa10.24□□□□□ -0.77
SF1-211ENST00000448404 PRO0255Q9UI72 69 aa10.24□□□□□ -0.77
SF1-211ENST00000448404 LINC00158P58513 81 aa10.23□□□□□ -0.77
SF1-211ENST00000448404 DAD1P61803 113 aa10.23□□□□□ -0.77
SF1-211ENST00000448404 LINC00612Q8N6U2 182 aa10.23□□□□□ -0.77
SF1-211ENST00000448404 FAM236AA0A1B0GUQ0 79 aa10.21□□□□□ -0.77
SF1-211ENST00000448404 FAM236BA0A1B0GV22 79 aa10.21□□□□□ -0.77
SF1-211ENST00000448404 FAM19A3Q7Z5A8 133 aa10.21□□□□□ -0.77
SF1-211ENST00000448404 Q8NAQ8 132 aa10.21□□□□□ -0.78
SF1-211ENST00000448404 CMYA5Q8N3K9 4069 aa10.21□□□□□ -0.78
SF1-211ENST00000448404 TIMM17BO60830 172 aa10.2□□□□□ -0.78
SF1-211ENST00000448404 ANGP03950 147 aaKnown RBP10.2□□□□□ -0.78
SF1-211ENST00000448404 COX6CP09669 75 aa10.2□□□□□ -0.78
SF1-211ENST00000448404 PRR3P79522 188 aaKnown RBP10.2□□□□□ -0.78
SF1-211ENST00000448404 C9orf116Q5BN46 136 aaPredicted RBP10.2□□□□□ -0.78
SF1-211ENST00000448404 LINC00337Q8N6G1 96 aa10.19□□□□□ -0.78
SF1-211ENST00000448404 MGAM2Q2M2H8 2515 aa10.19□□□□□ -0.78
SF1-211ENST00000448404 PRB2P02812 416 aaPredicted RBP10.19□□□□□ -0.78
SF1-211ENST00000448404 KRTAP10-11P60412 298 aa10.19□□□□□ -0.78
SF1-211ENST00000448404 FAM218AQ96MZ4 157 aa10.19□□□□□ -0.78
SF1-211ENST00000448404 TMEM126AQ9H061 195 aa10.19□□□□□ -0.78
SF1-211ENST00000448404 LOC107984640A0A0U1RRK4 108 aa10.18□□□□□ -0.78
SF1-211ENST00000448404 H3BT86 120 aa10.18□□□□□ -0.78
SF1-211ENST00000448404 C6orf226Q5I0X4 101 aa10.18□□□□□ -0.78
SF1-211ENST00000448404 LINC01600Q96MT4 127 aa10.18□□□□□ -0.78
SF1-211ENST00000448404 IGKV2-28A0A075B6P5 120 aa10.17□□□□□ -0.78
SF1-211ENST00000448404 A0A087WZ39 114 aa10.17□□□□□ -0.78
SF1-211ENST00000448404 IGKV2D-28P01615 120 aa10.17□□□□□ -0.78
SF1-211ENST00000448404 APOC4P55056 127 aa10.16□□□□□ -0.78
SF1-211ENST00000448404 CCL18P55774 89 aa10.16□□□□□ -0.78
SF1-211ENST00000448404 MRPL23Q16540 153 aaKnown RBP10.16□□□□□ -0.78
SF1-211ENST00000448404 C9orf153Q5TBE3 101 aa10.16□□□□□ -0.78
SF1-211ENST00000448404 TRBV7-7A0A0K0K1E9 115 aa10.16□□□□□ -0.78
SF1-211ENST00000448404 Q9HAA7 133 aa10.16□□□□□ -0.78
SF1-211ENST00000448404 SND1-IT1Q9HBX3 110 aa10.16□□□□□ -0.78
SF1-211ENST00000448404 KLK5Q9Y337 293 aaPredicted RBP10.16□□□□□ -0.78
SF1-211ENST00000448404 CYSRT1A8MQ03 144 aa10.15□□□□□ -0.78
SF1-211ENST00000448404 LST1O00453 97 aa10.15□□□□□ -0.78
SF1-211ENST00000448404 KRTAP24-1Q3LI83 254 aa10.15□□□□□ -0.78
SF1-211ENST00000448404 FAM240AA0A1B0GVK7 77 aa10.14□□□□□ -0.79
SF1-211ENST00000448404 SMIM9A6NGZ8 99 aa10.14□□□□□ -0.79
SF1-211ENST00000448404 C6orf223Q8N319 242 aa10.14□□□□□ -0.79
SF1-211ENST00000448404 LYRM9A8MSI8 78 aa10.14□□□□□ -0.79
SF1-211ENST00000448404 BAHCC1Q9P281 2608 aa10.14□□□□□ -0.79
SF1-211ENST00000448404 ATP5G1P05496 136 aa10.14□□□□□ -0.79
SF1-211ENST00000448404 CHCHD10Q8WYQ3 142 aaPredicted RBP10.14□□□□□ -0.79
SF1-211ENST00000448404 SMCR5Q8TEV8 140 aa10.13□□□□□ -0.79
SF1-211ENST00000448404 REG3AQ06141 175 aa10.13□□□□□ -0.79
SF1-211ENST00000448404 SS18Q15532 418 aa10.13□□□□□ -0.79
SF1-211ENST00000448404 KLK12Q9UKR0 248 aa10.12□□□□□ -0.79
SF1-211ENST00000448404 DEFB121Q5J5C9 76 aa10.12□□□□□ -0.79
SF1-211ENST00000448404 WFDC9Q8NEX5 89 aa10.12□□□□□ -0.79
SF1-211ENST00000448404 OR13C6PQ8NH95 151 aa10.12□□□□□ -0.79
SF1-211ENST00000448404 C3orf22Q8N5N4 141 aa10.11□□□□□ -0.79
SF1-211ENST00000448404 SPART-AS1P0CW21 52 aa10.1□□□□□ -0.79
SF1-211ENST00000448404 C10orf25Q5T742 122 aa10.1□□□□□ -0.79
SF1-211ENST00000448404 A0A1B0GUV1 79 aa10.09□□□□□ -0.79
SF1-211ENST00000448404 CRPP02741 224 aa10.09□□□□□ -0.79
SF1-211ENST00000448404 Q8NDZ9 215 aa10.09□□□□□ -0.79
SF1-211ENST00000448404 SMIM11BQ8TCY0 68 aa10.09□□□□□ -0.79
SF1-211ENST00000448404 Q6ZTC4 211 aa10.09□□□□□ -0.79
SF1-211ENST00000448404 A0A087WYN8 130 aa10.08□□□□□ -0.8
SF1-211ENST00000448404 COX7A2LO14548 114 aa10.08□□□□□ -0.8
SF1-211ENST00000448404 MIFP14174 115 aa10.08□□□□□ -0.8
SF1-211ENST00000448404 MALP21145 153 aa10.08□□□□□ -0.8
SF1-211ENST00000448404 SLPIP03973 132 aa10.07□□□□□ -0.8
SF1-211ENST00000448404 UQCRQO14949 82 aa10.07□□□□□ -0.8
SF1-211ENST00000448404 KIAA0087Q14695 138 aa10.07□□□□□ -0.8
SF1-211ENST00000448404 C9orf129Q5T035 196 aaKnown RBP10.07□□□□□ -0.8
SF1-211ENST00000448404 WFDC10BQ8IUB3 73 aa10.07□□□□□ -0.8
SF1-211ENST00000448404 UNQ6190/PRO20217Q6UXQ8 127 aa10.06□□□□□ -0.8
SF1-211ENST00000448404 IMUPQ9GZP8 106 aa10.06□□□□□ -0.8
SF1-211ENST00000448404 LINC00643Q86TS7 51 aa10.05□□□□□ -0.8
SF1-211ENST00000448404 IBA57-AS1B1ANH7 110 aa10.05□□□□□ -0.8
SF1-211ENST00000448404 ACYP1P07311 99 aa10.05□□□□□ -0.8
SF1-211ENST00000448404 FAM19A5Q7Z5A7 132 aaPredicted RBP10.05□□□□□ -0.8
SF1-211ENST00000448404 NANOS2P60321 138 aaKnown RBP10.04□□□□□ -0.8
SF1-211ENST00000448404 C5orf47Q569G3 176 aa10.04□□□□□ -0.8
SF1-211ENST00000448404 CD164L2Q6UWJ8 174 aa10.04□□□□□ -0.8
SF1-211ENST00000448404 C22orf24Q9Y442 160 aa10.04□□□□□ -0.8
SF1-211ENST00000448404 LYSTQ99698 3801 aa10.04□□□□□ -0.8
SF1-211ENST00000448404 ENHOQ6UWT2 76 aa10.03□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 84.6 ms