RNA–Protein interactions for RNA: ENST00000447439.6

KLHL3-202, Transcript of kelch like family member 3, humanhuman

TSL 1 (best)

Gene KLHL3, Length 2,697 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KLHL3-202ENST00000447439 BAALC-AS2P0C853 105 aa6.55□□□□□ -1.36
KLHL3-202ENST00000447439 PRR3P79522 188 aaKnown RBP6.55□□□□□ -1.36
KLHL3-202ENST00000447439 FAM222AQ5U5X8 452 aa6.55□□□□□ -1.36
KLHL3-202ENST00000447439 NHLRC4P0CG21 123 aaPredicted RBP6.54□□□□□ -1.36
KLHL3-202ENST00000447439 C9orf129Q5T035 196 aaKnown RBP6.54□□□□□ -1.36
KLHL3-202ENST00000447439 SMIM11BQ8TCY0 68 aa6.54□□□□□ -1.36
KLHL3-202ENST00000447439 C22orf24Q9Y442 160 aa6.54□□□□□ -1.36
KLHL3-202ENST00000447439 TRRAPQ9Y4A5 3859 aa6.54□□□□□ -1.36
KLHL3-202ENST00000447439 PAX4O43316 350 aa6.54□□□□□ -1.36
KLHL3-202ENST00000447439 OR13C6PQ8NH95 151 aa6.54□□□□□ -1.36
KLHL3-202ENST00000447439 LY6G6DO95868 133 aa6.53□□□□□ -1.36
KLHL3-202ENST00000447439 C6orf226Q5I0X4 101 aa6.53□□□□□ -1.36
KLHL3-202ENST00000447439 DEFB121Q5J5C9 76 aa6.53□□□□□ -1.36
KLHL3-202ENST00000447439 A0A087WZ39 114 aa6.53□□□□□ -1.36
KLHL3-202ENST00000447439 SLPIP03973 132 aa6.53□□□□□ -1.36
KLHL3-202ENST00000447439 FAM240AA0A1B0GVK7 77 aa6.53□□□□□ -1.36
KLHL3-202ENST00000447439 HTN3P15516 51 aa6.53□□□□□ -1.36
KLHL3-202ENST00000447439 NDUFV3P56181 108 aaKnown RBP6.53□□□□□ -1.36
KLHL3-202ENST00000447439 LINC00269Q8N2A0 174 aa6.53□□□□□ -1.36
KLHL3-202ENST00000447439 SMCR5Q8TEV8 140 aa6.53□□□□□ -1.36
KLHL3-202ENST00000447439 INAFM1C9JVW0 142 aa6.52□□□□□ -1.37
KLHL3-202ENST00000447439 C9orf116Q5BN46 136 aaPredicted RBP6.52□□□□□ -1.37
KLHL3-202ENST00000447439 MRPL23Q16540 153 aaKnown RBP6.52□□□□□ -1.37
KLHL3-202ENST00000447439 Q6Q795 121 aa6.52□□□□□ -1.37
KLHL3-202ENST00000447439 LINC00526Q96FQ7 95 aa6.52□□□□□ -1.37
KLHL3-202ENST00000447439 CELA1Q9UNI1 258 aa6.51□□□□□ -1.37
KLHL3-202ENST00000447439 TRAV13-2A0A0B4J235 113 aa6.51□□□□□ -1.37
KLHL3-202ENST00000447439 CCDC179H3BU77 68 aa6.51□□□□□ -1.37
KLHL3-202ENST00000447439 RPL28P46779 137 aaKnown RBP6.5□□□□□ -1.37
KLHL3-202ENST00000447439 KIR2DL5BQ8NHK3 375 aa6.5□□□□□ -1.37
KLHL3-202ENST00000447439 B5MCH6 92 aa6.5□□□□□ -1.37
KLHL3-202ENST00000447439 LECT2O14960 151 aa6.5□□□□□ -1.37
KLHL3-202ENST00000447439 TRACP01848 142 aa6.5□□□□□ -1.37
KLHL3-202ENST00000447439 ANGP03950 147 aaKnown RBP6.5□□□□□ -1.37
KLHL3-202ENST00000447439 SS18Q15532 418 aa6.5□□□□□ -1.37
KLHL3-202ENST00000447439 GAGE2AQ6NT46 116 aa6.5□□□□□ -1.37
KLHL3-202ENST00000447439 SS18L2Q9UHA2 77 aa6.5□□□□□ -1.37
KLHL3-202ENST00000447439 PRO0255Q9UI72 69 aa6.5□□□□□ -1.37
KLHL3-202ENST00000447439 IGHV4-28A0A0C4DH34 117 aa6.49□□□□□ -1.37
KLHL3-202ENST00000447439 C3orf56Q8N813 242 aa6.49□□□□□ -1.37
KLHL3-202ENST00000447439 IBA57-AS1B1ANH7 110 aa6.49□□□□□ -1.37
KLHL3-202ENST00000447439 MALP21145 153 aa6.49□□□□□ -1.37
KLHL3-202ENST00000447439 LINC00612Q8N6U2 182 aa6.49□□□□□ -1.37
KLHL3-202ENST00000447439 C14orf132Q9NPU4 83 aa6.48□□□□□ -1.37
KLHL3-202ENST00000447439 ATRQ13535 2644 aa6.47□□□□□ -1.37
KLHL3-202ENST00000447439 NCR3O14931 201 aa6.47□□□□□ -1.37
KLHL3-202ENST00000447439 DNAL4O96015 105 aa6.47□□□□□ -1.37
KLHL3-202ENST00000447439 C6orf223Q8N319 242 aa6.47□□□□□ -1.37
KLHL3-202ENST00000447439 Q8NDZ9 215 aa6.47□□□□□ -1.37
KLHL3-202ENST00000447439 CHCHD10Q8WYQ3 142 aaPredicted RBP6.47□□□□□ -1.37
KLHL3-202ENST00000447439 ACYP1P07311 99 aa6.47□□□□□ -1.37
KLHL3-202ENST00000447439 DAD1P61803 113 aa6.46□□□□□ -1.37
KLHL3-202ENST00000447439 REG3AQ06141 175 aa6.46□□□□□ -1.38
KLHL3-202ENST00000447439 C10orf25Q5T742 122 aa6.45□□□□□ -1.38
KLHL3-202ENST00000447439 A0A1B0GUV1 79 aa6.45□□□□□ -1.38
KLHL3-202ENST00000447439 FAM236AA0A1B0GUQ0 79 aa6.44□□□□□ -1.38
KLHL3-202ENST00000447439 FAM236BA0A1B0GV22 79 aa6.44□□□□□ -1.38
KLHL3-202ENST00000447439 KIAA0087Q14695 138 aa6.44□□□□□ -1.38
KLHL3-202ENST00000447439 Q8IZM0 81 aa6.44□□□□□ -1.38
KLHL3-202ENST00000447439 TRBV7-7A0A0K0K1E9 115 aa6.44□□□□□ -1.38
KLHL3-202ENST00000447439 NANOS2P60321 138 aaKnown RBP6.44□□□□□ -1.38
KLHL3-202ENST00000447439 C9orf66Q5T8R8 295 aa6.44□□□□□ -1.38
KLHL3-202ENST00000447439 HIVEP1P15822 2718 aa6.43□□□□□ -1.38
KLHL3-202ENST00000447439 NSD1Q96L73 2696 aaPredicted RBP6.43□□□□□ -1.38
KLHL3-202ENST00000447439 CD164L2Q6UWJ8 174 aa6.43□□□□□ -1.38
KLHL3-202ENST00000447439 UNQ6190/PRO20217Q6UXQ8 127 aa6.43□□□□□ -1.38
KLHL3-202ENST00000447439 RETNQ9HD89 108 aa6.43□□□□□ -1.38
KLHL3-202ENST00000447439 SMIM9A6NGZ8 99 aa6.43□□□□□ -1.38
KLHL3-202ENST00000447439 Q8NAQ8 132 aa6.43□□□□□ -1.38
KLHL3-202ENST00000447439 KLK12Q9UKR0 248 aa6.43□□□□□ -1.38
KLHL3-202ENST00000447439 LYRM9A8MSI8 78 aa6.42□□□□□ -1.38
KLHL3-202ENST00000447439 INAFM2P0DMQ5 153 aa6.42□□□□□ -1.38
KLHL3-202ENST00000447439 IGKV3D-7A0A0C4DH55 119 aa6.42□□□□□ -1.38
KLHL3-202ENST00000447439 SDIM1Q6ZPB5 146 aa6.42□□□□□ -1.38
KLHL3-202ENST00000447439 LINC01561Q8N1V8 128 aa6.42□□□□□ -1.38
KLHL3-202ENST00000447439 H0YGX0 51 aa6.41□□□□□ -1.38
KLHL3-202ENST00000447439 IGHV4-30-4P0DP06 118 aa6.41□□□□□ -1.38
KLHL3-202ENST00000447439 APOC4P55056 127 aa6.41□□□□□ -1.38
KLHL3-202ENST00000447439 IMUPQ9GZP8 106 aa6.41□□□□□ -1.38
KLHL3-202ENST00000447439 BAHCC1Q9P281 2608 aa6.4□□□□□ -1.38
KLHL3-202ENST00000447439 LINC00643Q86TS7 51 aa6.4□□□□□ -1.38
KLHL3-202ENST00000447439 LINC00846Q9NV44 126 aa6.4□□□□□ -1.38
KLHL3-202ENST00000447439 TEP1Q99973 2627 aaKnown RBP6.4□□□□□ -1.39
KLHL3-202ENST00000447439 SPAG11BQ08648 103 aa6.4□□□□□ -1.39
KLHL3-202ENST00000447439 C6orf99Q4VX62 202 aa6.4□□□□□ -1.39
KLHL3-202ENST00000447439 SMIM20Q8N5G0 67 aa6.4□□□□□ -1.39
KLHL3-202ENST00000447439 CXCL5P42830 114 aa6.39□□□□□ -1.39
KLHL3-202ENST00000447439 PKD1L1Q8TDX9 2849 aa6.39□□□□□ -1.39
KLHL3-202ENST00000447439 OXLD1Q5BKU9 147 aa6.39□□□□□ -1.39
KLHL3-202ENST00000447439 XAGE1AQ9HD64 81 aa6.39□□□□□ -1.39
KLHL3-202ENST00000447439 A0A087WVE0 104 aa6.38□□□□□ -1.39
KLHL3-202ENST00000447439 CYSRT1A8MQ03 144 aa6.38□□□□□ -1.39
KLHL3-202ENST00000447439 SPART-AS1P0CW21 52 aa6.38□□□□□ -1.39
KLHL3-202ENST00000447439 ORMDL1Q9P0S3 153 aa6.38□□□□□ -1.39
KLHL3-202ENST00000447439 RPL18AQ02543 176 aaKnown RBP6.38□□□□□ -1.39
KLHL3-202ENST00000447439 ENHOQ6UWT2 76 aa6.38□□□□□ -1.39
KLHL3-202ENST00000447439 HIGD2BQ4VC39 106 aa6.37□□□□□ -1.39
KLHL3-202ENST00000447439 S100A7L2Q5SY68 101 aa6.37□□□□□ -1.39
KLHL3-202ENST00000447439 Q8N814 137 aa6.37□□□□□ -1.39
KLHL3-202ENST00000447439 KLK5Q9Y337 293 aaPredicted RBP6.37□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms