RNA–Protein interactions for RNA: ENST00000444058.1

ATPAF2-201, Transcript of ATP synthase mitochondrial F1 complex assembly factor 2, humanhuman

TSL 3

Gene ATPAF2, Length 685 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF2-201ENST00000444058 SVBPQ8N300 66 aa11.64□□□□□ -0.55
ATPAF2-201ENST00000444058 SMCO4Q9NRQ5 59 aa11.64□□□□□ -0.55
ATPAF2-201ENST00000444058 TINCRA0A1B0GVN0 87 aa11.63□□□□□ -0.55
ATPAF2-201ENST00000444058 GAGE2EQ4V326 116 aa11.63□□□□□ -0.55
ATPAF2-201ENST00000444058 LINC01600Q96MT4 127 aa11.63□□□□□ -0.55
ATPAF2-201ENST00000444058 GAGE2DQ9UEU5 116 aa11.63□□□□□ -0.55
ATPAF2-201ENST00000444058 IGLV5-45A0A087WSX0 123 aa11.62□□□□□ -0.55
ATPAF2-201ENST00000444058 PHF5AQ7RTV0 110 aaKnown RBP11.62□□□□□ -0.55
ATPAF2-201ENST00000444058 CST9LQ9H4G1 147 aa11.62□□□□□ -0.55
ATPAF2-201ENST00000444058 TOMM7Q9P0U1 55 aa11.62□□□□□ -0.55
ATPAF2-201ENST00000444058 PSORS1C2Q9UIG4 136 aa11.62□□□□□ -0.55
ATPAF2-201ENST00000444058 TRAPPC1Q9Y5R8 145 aa11.62□□□□□ -0.55
ATPAF2-201ENST00000444058 CXCL5P42830 114 aa11.61□□□□□ -0.55
ATPAF2-201ENST00000444058 PMVKQ15126 192 aa11.61□□□□□ -0.55
ATPAF2-201ENST00000444058 REG3GQ6UW15 175 aa11.61□□□□□ -0.55
ATPAF2-201ENST00000444058 SLC7A5P1Q8MH63 180 aa11.61□□□□□ -0.55
ATPAF2-201ENST00000444058 HMCN2Q8NDA2 5059 aa11.6□□□□□ -0.55
ATPAF2-201ENST00000444058 FAM168BA1KXE4 195 aa11.6□□□□□ -0.55
ATPAF2-201ENST00000444058 LINC00469Q8N7U9 141 aa11.6□□□□□ -0.55
ATPAF2-201ENST00000444058 F8VRH5 84 aa11.59□□□□□ -0.55
ATPAF2-201ENST00000444058 PDZD11Q5EBL8 140 aa11.59□□□□□ -0.55
ATPAF2-201ENST00000444058 C18orf32Q8TCD1 76 aa11.59□□□□□ -0.55
ATPAF2-201ENST00000444058 SMIM1B2RUZ4 78 aa11.58□□□□□ -0.56
ATPAF2-201ENST00000444058 LINC00614P0C842 121 aa11.58□□□□□ -0.56
ATPAF2-201ENST00000444058 ODF1Q14990 250 aa11.57□□□□□ -0.56
ATPAF2-201ENST00000444058 C9orf129Q5T035 196 aaKnown RBP11.57□□□□□ -0.56
ATPAF2-201ENST00000444058 FAM19A5Q7Z5A7 132 aaPredicted RBP11.57□□□□□ -0.56
ATPAF2-201ENST00000444058 KRTAP7-1Q8IUC3 87 aa11.57□□□□□ -0.56
ATPAF2-201ENST00000444058 A0A096LNJ9 63 aa11.56□□□□□ -0.56
ATPAF2-201ENST00000444058 C1orf137Q5JT78 98 aa11.56□□□□□ -0.56
ATPAF2-201ENST00000444058 URB1-AS1Q96HZ7 61 aa11.56□□□□□ -0.56
ATPAF2-201ENST00000444058 RAB5BP61020 215 aa11.55□□□□□ -0.56
ATPAF2-201ENST00000444058 M0QXV9 152 aa11.54□□□□□ -0.56
ATPAF2-201ENST00000444058 HBDP02042 147 aa11.54□□□□□ -0.56
ATPAF2-201ENST00000444058 COX7B2Q8TF08 81 aa11.54□□□□□ -0.56
ATPAF2-201ENST00000444058 PLA2G2DQ9UNK4 145 aa11.54□□□□□ -0.56
ATPAF2-201ENST00000444058 H3BRM9 83 aa11.53□□□□□ -0.56
ATPAF2-201ENST00000444058 IGLV7-43P04211 117 aa11.53□□□□□ -0.56
ATPAF2-201ENST00000444058 YPEL4Q96NS1 127 aa11.53□□□□□ -0.56
ATPAF2-201ENST00000444058 TNXBP22105 4242 aa11.52□□□□□ -0.56
ATPAF2-201ENST00000444058 IGLC3P0DOY3 106 aa11.52□□□□□ -0.57
ATPAF2-201ENST00000444058 KRTAP10-8P60410 259 aa11.51□□□□□ -0.57
ATPAF2-201ENST00000444058 KRTAP11-1Q8IUC1 163 aa11.51□□□□□ -0.57
ATPAF2-201ENST00000444058 ATP5LO75964 103 aa11.5□□□□□ -0.57
ATPAF2-201ENST00000444058 SPINK8P0C7L1 97 aa11.5□□□□□ -0.57
ATPAF2-201ENST00000444058 UBE2BP63146 152 aa11.5□□□□□ -0.57
ATPAF2-201ENST00000444058 DIRC1Q969H9 104 aa11.49□□□□□ -0.57
ATPAF2-201ENST00000444058 XAGE1AQ9HD64 81 aa11.49□□□□□ -0.57
ATPAF2-201ENST00000444058 IGLV5-39A0A0G2JS06 123 aa11.48□□□□□ -0.57
ATPAF2-201ENST00000444058 LBHQ53QV2 105 aaPredicted RBP11.48□□□□□ -0.57
ATPAF2-201ENST00000444058 NDUFA6P56556 154 aa11.47□□□□□ -0.57
ATPAF2-201ENST00000444058 PMCHL1Q16048 86 aa11.47□□□□□ -0.57
ATPAF2-201ENST00000444058 CHCHD1Q96BP2 118 aaKnown RBP11.47□□□□□ -0.57
ATPAF2-201ENST00000444058 TP73-AS1Q9UF72 201 aa11.47□□□□□ -0.57
ATPAF2-201ENST00000444058 C22orf24Q9Y442 160 aa11.47□□□□□ -0.57
ATPAF2-201ENST00000444058 ZNF22P17026 224 aaPredicted RBP11.45□□□□□ -0.58
ATPAF2-201ENST00000444058 H0Y9J4 135 aa11.44□□□□□ -0.58
ATPAF2-201ENST00000444058 BAGE3Q86Y29 109 aa11.44□□□□□ -0.58
ATPAF2-201ENST00000444058 NUPR1O60356 82 aa11.42□□□□□ -0.58
ATPAF2-201ENST00000444058 SFTA2Q6UW10 78 aa11.42□□□□□ -0.58
ATPAF2-201ENST00000444058 MRPL55Q7Z7F7 128 aaKnown RBP11.42□□□□□ -0.58
ATPAF2-201ENST00000444058 CBLN2Q8IUK8 224 aa11.41□□□□□ -0.58
ATPAF2-201ENST00000444058 TRAV12-1A0A0B4J245 112 aa11.4□□□□□ -0.58
ATPAF2-201ENST00000444058 C11orf86A6NJI1 115 aa11.4□□□□□ -0.58
ATPAF2-201ENST00000444058 IGLV5-37A0A075B6J1 123 aa11.39□□□□□ -0.59
ATPAF2-201ENST00000444058 COX17Q14061 63 aa11.39□□□□□ -0.59
ATPAF2-201ENST00000444058 CHTOPQ9Y3Y2 248 aaKnown RBP11.39□□□□□ -0.59
ATPAF2-201ENST00000444058 ZNF861PO60384 105 aa11.38□□□□□ -0.59
ATPAF2-201ENST00000444058 TMEM170BQ5T4T1 132 aa11.38□□□□□ -0.59
ATPAF2-201ENST00000444058 IFI27L1Q96BM0 104 aa11.38□□□□□ -0.59
ATPAF2-201ENST00000444058 HSBP1O75506 76 aa11.36□□□□□ -0.59
ATPAF2-201ENST00000444058 ERG28Q9UKR5 140 aa11.36□□□□□ -0.59
ATPAF2-201ENST00000444058 IGLV1-50A0A075B6I6 118 aa11.35□□□□□ -0.59
ATPAF2-201ENST00000444058 KRTAP1-4P0C5Y4 121 aa11.35□□□□□ -0.59
ATPAF2-201ENST00000444058 PFN2P35080 140 aa11.35□□□□□ -0.59
ATPAF2-201ENST00000444058 LINC00167Q96N53 147 aa11.35□□□□□ -0.59
ATPAF2-201ENST00000444058 TRGC2P03986 189 aa11.34□□□□□ -0.59
ATPAF2-201ENST00000444058 ZNF625Q96I27 306 aaPredicted RBP11.34□□□□□ -0.59
ATPAF2-201ENST00000444058 UBR4Q5T4S7 5183 aa11.33□□□□□ -0.6
ATPAF2-201ENST00000444058 BCE1O60756 84 aa11.33□□□□□ -0.6
ATPAF2-201ENST00000444058 PRR26Q8N8Z3 221 aa11.33□□□□□ -0.6
ATPAF2-201ENST00000444058 NKAPP1Q8N9T2 125 aa11.33□□□□□ -0.6
ATPAF2-201ENST00000444058 TMEM223A0PJW6 202 aa11.32□□□□□ -0.6
ATPAF2-201ENST00000444058 RPL28P46779 137 aaKnown RBP11.32□□□□□ -0.6
ATPAF2-201ENST00000444058 SND1-IT1Q9HBX3 110 aa11.32□□□□□ -0.6
ATPAF2-201ENST00000444058 RPL37AP8A6NKH3 93 aa11.31□□□□□ -0.6
ATPAF2-201ENST00000444058 FAM19A2Q8N3H0 131 aa11.31□□□□□ -0.6
ATPAF2-201ENST00000444058 S100A1P23297 94 aa11.3□□□□□ -0.6
ATPAF2-201ENST00000444058 RPL24P83731 157 aaKnown RBP11.3□□□□□ -0.6
ATPAF2-201ENST00000444058 COLCA2A8K830 154 aa11.29□□□□□ -0.6
ATPAF2-201ENST00000444058 ATP6V1G1O75348 118 aa11.29□□□□□ -0.6
ATPAF2-201ENST00000444058 RPL13AP40429 203 aaKnown RBP11.29□□□□□ -0.6
ATPAF2-201ENST00000444058 GAGE10A6NGK3 116 aa11.28□□□□□ -0.6
ATPAF2-201ENST00000444058 SCO1O75880 301 aa11.28□□□□□ -0.6
ATPAF2-201ENST00000444058 VPREB1P12018 145 aa11.28□□□□□ -0.6
ATPAF2-201ENST00000444058 SERF1AO75920 110 aa11.27□□□□□ -0.61
ATPAF2-201ENST00000444058 LEPROTL1O95214 131 aa11.27□□□□□ -0.61
ATPAF2-201ENST00000444058 LINC00310P59036 64 aa11.26□□□□□ -0.61
ATPAF2-201ENST00000444058 KRTAP13-1Q8IUC0 172 aa11.25□□□□□ -0.61
ATPAF2-201ENST00000444058 LINC00158P58513 81 aa11.24□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 132 ms