RNA–Protein interactions for RNA: ENST00000440705.6

VRK2-207, Transcript of vaccinia related kinase 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VRK2, Length 1,676 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK2-207ENST00000440705 LBHQ53QV2 105 aaPredicted RBP13.44□□□□□ -0.26
VRK2-207ENST00000440705 SPANXDQ9BXN6 97 aa13.44□□□□□ -0.26
VRK2-207ENST00000440705 SPANXCQ9NY87 97 aa13.44□□□□□ -0.26
VRK2-207ENST00000440705 TGP01266 2768 aa13.43□□□□□ -0.26
VRK2-207ENST00000440705 NBDYA0A0U1RRE5 68 aa13.43□□□□□ -0.26
VRK2-207ENST00000440705 C2orf82Q6UX34 121 aa13.43□□□□□ -0.26
VRK2-207ENST00000440705 PLECQ15149 4684 aaKnown RBP13.42□□□□□ -0.26
VRK2-207ENST00000440705 STARD9Q9P2P6 4700 aa13.42□□□□□ -0.26
VRK2-207ENST00000440705 ZNF561-AS1K7EIQ3 104 aa13.42□□□□□ -0.26
VRK2-207ENST00000440705 CASC10Q5T4H9 136 aa13.42□□□□□ -0.26
VRK2-207ENST00000440705 ADAMTSL4-AS1Q5T5F5 129 aa13.42□□□□□ -0.26
VRK2-207ENST00000440705 TENM2Q9NT68 2774 aa13.42□□□□□ -0.26
VRK2-207ENST00000440705 C3orf84H3BNL1 204 aa13.41□□□□□ -0.26
VRK2-207ENST00000440705 PTTG1IPP53801 180 aa13.41□□□□□ -0.26
VRK2-207ENST00000440705 C15orf56Q8N910 161 aa13.41□□□□□ -0.26
VRK2-207ENST00000440705 SMIM13P0DJ93 91 aa13.4□□□□□ -0.26
VRK2-207ENST00000440705 FXYD2P54710 66 aa13.4□□□□□ -0.26
VRK2-207ENST00000440705 COL5A1-AS1Q5SY13 56 aa13.4□□□□□ -0.26
VRK2-207ENST00000440705 NTN5Q8WTR8 489 aaPredicted RBP13.4□□□□□ -0.26
VRK2-207ENST00000440705 A6NDN8 102 aa13.39□□□□□ -0.27
VRK2-207ENST00000440705 GVQW2A0A096LPI5 108 aaPredicted RBP13.38□□□□□ -0.27
VRK2-207ENST00000440705 TMEM238LA0A1B0GVL6 79 aa13.38□□□□□ -0.27
VRK2-207ENST00000440705 A6NJY4 79 aa13.38□□□□□ -0.27
VRK2-207ENST00000440705 HIGD2BQ4VC39 106 aa13.38□□□□□ -0.27
VRK2-207ENST00000440705 C6orf223Q8N319 242 aa13.38□□□□□ -0.27
VRK2-207ENST00000440705 LINC00526Q96FQ7 95 aa13.38□□□□□ -0.27
VRK2-207ENST00000440705 ERG28Q9UKR5 140 aa13.38□□□□□ -0.27
VRK2-207ENST00000440705 LYSTQ99698 3801 aa13.38□□□□□ -0.27
VRK2-207ENST00000440705 A0A0U1RRA0 63 aa13.37□□□□□ -0.27
VRK2-207ENST00000440705 F8WDY8 70 aa13.37□□□□□ -0.27
VRK2-207ENST00000440705 IFITM1P13164 125 aa13.37□□□□□ -0.27
VRK2-207ENST00000440705 MUSTN1Q8IVN3 82 aa13.37□□□□□ -0.27
VRK2-207ENST00000440705 COPS9Q8WXC6 57 aa13.37□□□□□ -0.27
VRK2-207ENST00000440705 LINC00158P58513 81 aa13.37□□□□□ -0.27
VRK2-207ENST00000440705 RPL24P83731 157 aaKnown RBP13.37□□□□□ -0.27
VRK2-207ENST00000440705 C2orf48Q96LS8 159 aa13.37□□□□□ -0.27
VRK2-207ENST00000440705 COX17Q14061 63 aa13.36□□□□□ -0.27
VRK2-207ENST00000440705 UNQ6190/PRO20217Q6UXQ8 127 aa13.36□□□□□ -0.27
VRK2-207ENST00000440705 DAND5Q8N907 189 aa13.36□□□□□ -0.27
VRK2-207ENST00000440705 PFN2P35080 140 aa13.35□□□□□ -0.27
VRK2-207ENST00000440705 USP17L23D6RBM5 183 aa13.34□□□□□ -0.27
VRK2-207ENST00000440705 PSCAO43653 123 aa13.34□□□□□ -0.27
VRK2-207ENST00000440705 CAMK2N2Q96S95 79 aa13.34□□□□□ -0.27
VRK2-207ENST00000440705 C10orf25Q5T742 122 aa13.34□□□□□ -0.27
VRK2-207ENST00000440705 MIR7-3HGQ8N6C7 128 aa13.33□□□□□ -0.28
VRK2-207ENST00000440705 LINC00308Q8TCZ7 52 aa13.33□□□□□ -0.28
VRK2-207ENST00000440705 NHP2Q9NX24 153 aaKnown RBP13.33□□□□□ -0.28
VRK2-207ENST00000440705 DNAH1Q9P2D7 4330 aa13.32□□□□□ -0.28
VRK2-207ENST00000440705 TRBV30A0A0K0K1B3 111 aa13.31□□□□□ -0.28
VRK2-207ENST00000440705 LY6G6CO95867 125 aa13.31□□□□□ -0.28
VRK2-207ENST00000440705 NPC2P61916 151 aa13.31□□□□□ -0.28
VRK2-207ENST00000440705 PPDPFQ9H3Y8 114 aa13.31□□□□□ -0.28
VRK2-207ENST00000440705 A4D1N5 150 aa13.31□□□□□ -0.28
VRK2-207ENST00000440705 VPS13DQ5THJ4 4388 aa13.3□□□□□ -0.28
VRK2-207ENST00000440705 M0R2N4 97 aa13.3□□□□□ -0.28
VRK2-207ENST00000440705 C9orf116Q5BN46 136 aaPredicted RBP13.3□□□□□ -0.28
VRK2-207ENST00000440705 A0A1B0GWB2 263 aa13.29□□□□□ -0.28
VRK2-207ENST00000440705 LINC00476Q8WZB0 136 aa13.29□□□□□ -0.28
VRK2-207ENST00000440705 C6orf48Q9UBA6 75 aa13.29□□□□□ -0.28
VRK2-207ENST00000440705 TRAV16A0A0A6YYK6 109 aaPredicted RBP13.28□□□□□ -0.28
VRK2-207ENST00000440705 SYCNQ0VAF6 134 aa13.28□□□□□ -0.28
VRK2-207ENST00000440705 Q6ZR54 194 aa13.28□□□□□ -0.28
VRK2-207ENST00000440705 Q6ZRU5 148 aa13.28□□□□□ -0.28
VRK2-207ENST00000440705 LECT2O14960 151 aa13.27□□□□□ -0.29
VRK2-207ENST00000440705 EIF4EBP3O60516 100 aaPredicted RBP13.27□□□□□ -0.29
VRK2-207ENST00000440705 SOSTDC1Q6X4U4 206 aa13.27□□□□□ -0.29
VRK2-207ENST00000440705 CFC1BP0CG36 223 aa13.26□□□□□ -0.29
VRK2-207ENST00000440705 CFC1P0CG37 223 aa13.26□□□□□ -0.29
VRK2-207ENST00000440705 C14orf177Q52M58 125 aa13.25□□□□□ -0.29
VRK2-207ENST00000440705 Q6ZRN7 208 aaPredicted RBP13.25□□□□□ -0.29
VRK2-207ENST00000440705 K7ERJ3 54 aa13.24□□□□□ -0.29
VRK2-207ENST00000440705 TAX1BP3O14907 124 aa13.24□□□□□ -0.29
VRK2-207ENST00000440705 RNF151Q2KHN1 245 aa13.24□□□□□ -0.29
VRK2-207ENST00000440705 CARD19Q96LW7 228 aa13.24□□□□□ -0.29
VRK2-207ENST00000440705 A0A0B4J2C4 111 aa13.23□□□□□ -0.29
VRK2-207ENST00000440705 LOC107984156A0A0G2JMH3 177 aa13.23□□□□□ -0.29
VRK2-207ENST00000440705 ARL17AQ8IVW1 177 aa13.23□□□□□ -0.29
VRK2-207ENST00000440705 RAB37Q96AX2 223 aa13.23□□□□□ -0.29
VRK2-207ENST00000440705 WFDC2Q14508 124 aa13.21□□□□□ -0.29
VRK2-207ENST00000440705 SND1-IT1Q9HBX3 110 aa13.21□□□□□ -0.29
VRK2-207ENST00000440705 SLPIP03973 132 aa13.21□□□□□ -0.3
VRK2-207ENST00000440705 PRO1854Q9UHT4 67 aa13.21□□□□□ -0.3
VRK2-207ENST00000440705 NDUFC2-KCTD14E9PQ53 114 aa13.2□□□□□ -0.3
VRK2-207ENST00000440705 LRCOL1A6NCL2 159 aa13.19□□□□□ -0.3
VRK2-207ENST00000440705 C9orf118A6NHY6 69 aa13.18□□□□□ -0.3
VRK2-207ENST00000440705 C1orf134Q5TEV5 83 aa13.18□□□□□ -0.3
VRK2-207ENST00000440705 TLX1NBP0CAT3 122 aa13.16□□□□□ -0.3
VRK2-207ENST00000440705 CNBPP62633 177 aaKnown RBP13.16□□□□□ -0.3
VRK2-207ENST00000440705 PGPEP1Q9NXJ5 209 aa13.15□□□□□ -0.3
VRK2-207ENST00000440705 A0A1B0GV90 55 aa13.15□□□□□ -0.31
VRK2-207ENST00000440705 NDUFC2O95298 119 aa13.15□□□□□ -0.31
VRK2-207ENST00000440705 H3BUT2 72 aa13.14□□□□□ -0.31
VRK2-207ENST00000440705 Q6ZRP5 223 aa13.13□□□□□ -0.31
VRK2-207ENST00000440705 TRAV13-2A0A0B4J235 113 aa13.12□□□□□ -0.31
VRK2-207ENST00000440705 TSPAN13O95857 204 aa13.12□□□□□ -0.31
VRK2-207ENST00000440705 GAGE2EQ4V326 116 aa13.12□□□□□ -0.31
VRK2-207ENST00000440705 XAGE1AQ9HD64 81 aa13.12□□□□□ -0.31
VRK2-207ENST00000440705 GAGE2DQ9UEU5 116 aa13.12□□□□□ -0.31
VRK2-207ENST00000440705 DNAH10Q8IVF4 4471 aa13.11□□□□□ -0.31
VRK2-207ENST00000440705 IGKV2-28A0A075B6P5 120 aa13.11□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 66.4 ms