RNA–Protein interactions for RNA: ENST00000440127.1

HMGB3P11-201, Transcript of high mobility group box 3 pseudogene 11, humanhuman

BASIC

Gene HMGB3P11, Length 604 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P11-201ENST00000440127 CFAP46Q8IYW2 2715 aa2.33□□□□□ -2.04
HMGB3P11-201ENST00000440127 UBR5O95071 2799 aaPredicted RBP2.33□□□□□ -2.04
HMGB3P11-201ENST00000440127 TRBV6-8A0A0A6YYG3 113 aa2.33□□□□□ -2.04
HMGB3P11-201ENST00000440127 TRAV13-1A0A0B4J241 112 aa2.33□□□□□ -2.04
HMGB3P11-201ENST00000440127 J3QR89 54 aa2.33□□□□□ -2.04
HMGB3P11-201ENST00000440127 TCL1BO95988 128 aa2.33□□□□□ -2.04
HMGB3P11-201ENST00000440127 IGHV3-33P01772 117 aa2.33□□□□□ -2.04
HMGB3P11-201ENST00000440127 DEFB130BP0DP73 79 aa2.33□□□□□ -2.04
HMGB3P11-201ENST00000440127 DEFB130AP0DP74 79 aa2.33□□□□□ -2.04
HMGB3P11-201ENST00000440127 APOC4P55056 127 aa2.33□□□□□ -2.04
HMGB3P11-201ENST00000440127 WFDC2Q14508 124 aa2.33□□□□□ -2.04
HMGB3P11-201ENST00000440127 PRR4Q16378 134 aa2.33□□□□□ -2.04
HMGB3P11-201ENST00000440127 MIAQ16674 131 aa2.33□□□□□ -2.04
HMGB3P11-201ENST00000440127 SFTA2Q6UW10 78 aa2.33□□□□□ -2.04
HMGB3P11-201ENST00000440127 COPS9Q8WXC6 57 aa2.33□□□□□ -2.04
HMGB3P11-201ENST00000440127 PRO0461Q9UI25 63 aa2.33□□□□□ -2.04
HMGB3P11-201ENST00000440127 ACACBO00763 2458 aa2.33□□□□□ -2.04
HMGB3P11-201ENST00000440127 SPTAN1Q13813 2472 aaKnown RBP2.32□□□□□ -2.04
HMGB3P11-201ENST00000440127 TRBV30A0A0K0K1B3 111 aa2.32□□□□□ -2.04
HMGB3P11-201ENST00000440127 LYRM9A8MSI8 78 aa2.32□□□□□ -2.04
HMGB3P11-201ENST00000440127 F5H768 121 aa2.32□□□□□ -2.04
HMGB3P11-201ENST00000440127 H7C2G1 150 aa2.32□□□□□ -2.04
HMGB3P11-201ENST00000440127 KRTAP1-4P0C5Y4 121 aa2.32□□□□□ -2.04
HMGB3P11-201ENST00000440127 NPC2P61916 151 aa2.32□□□□□ -2.04
HMGB3P11-201ENST00000440127 ATXN8Q156A1 80 aa2.32□□□□□ -2.04
HMGB3P11-201ENST00000440127 Q1RN00 199 aa2.32□□□□□ -2.04
HMGB3P11-201ENST00000440127 ETDBQ3ZM63 59 aa2.32□□□□□ -2.04
HMGB3P11-201ENST00000440127 C6orf223Q8N319 242 aa2.32□□□□□ -2.04
HMGB3P11-201ENST00000440127 WFDC9Q8NEX5 89 aa2.32□□□□□ -2.04
HMGB3P11-201ENST00000440127 ATP6V0E2Q8NHE4 81 aa2.32□□□□□ -2.04
HMGB3P11-201ENST00000440127 LINC00308Q8TCZ7 52 aa2.32□□□□□ -2.04
HMGB3P11-201ENST00000440127 COX7B2Q8TF08 81 aa2.32□□□□□ -2.04
HMGB3P11-201ENST00000440127 PRO0255Q9UI72 69 aa2.32□□□□□ -2.04
HMGB3P11-201ENST00000440127 SPG11Q96JI7 2443 aa2.31□□□□□ -2.04
HMGB3P11-201ENST00000440127 IGLV4-60A0A075B6I1 120 aa2.31□□□□□ -2.04
HMGB3P11-201ENST00000440127 IGKV3OR2-268A0A0C4DH90 116 aa2.31□□□□□ -2.04
HMGB3P11-201ENST00000440127 TMEM262E9PQX1 116 aa2.31□□□□□ -2.04
HMGB3P11-201ENST00000440127 M0QXV9 152 aa2.31□□□□□ -2.04
HMGB3P11-201ENST00000440127 COX6CP09669 75 aa2.31□□□□□ -2.04
HMGB3P11-201ENST00000440127 MIFP14174 115 aa2.31□□□□□ -2.04
HMGB3P11-201ENST00000440127 EGFEM1PQ0D2K5 195 aa2.31□□□□□ -2.04
HMGB3P11-201ENST00000440127 SS18Q15532 418 aa2.31□□□□□ -2.04
HMGB3P11-201ENST00000440127 MEIG1Q5JSS6 88 aa2.31□□□□□ -2.04
HMGB3P11-201ENST00000440127 LCE3AQ5TA76 89 aa2.31□□□□□ -2.04
HMGB3P11-201ENST00000440127 FAM222AQ5U5X8 452 aa2.31□□□□□ -2.04
HMGB3P11-201ENST00000440127 TEN1Q86WV5 123 aa2.31□□□□□ -2.04
HMGB3P11-201ENST00000440127 ZNF625Q96I27 306 aaPredicted RBP2.31□□□□□ -2.04
HMGB3P11-201ENST00000440127 ICOSQ9Y6W8 199 aa2.31□□□□□ -2.04
HMGB3P11-201ENST00000440127 TACC2O95359 2948 aa2.31□□□□□ -2.04
HMGB3P11-201ENST00000440127 FBN2P35556 2912 aa2.31□□□□□ -2.04
HMGB3P11-201ENST00000440127 RELNP78509 3460 aa2.3□□□□□ -2.04
HMGB3P11-201ENST00000440127 CSPG4Q6UVK1 2322 aa2.3□□□□□ -2.04
HMGB3P11-201ENST00000440127 NAV2Q8IVL1 2488 aa2.3□□□□□ -2.04
HMGB3P11-201ENST00000440127 ANKRD17O75179 2603 aaKnown RBP2.3□□□□□ -2.04
HMGB3P11-201ENST00000440127 FLNCQ14315 2725 aa2.3□□□□□ -2.04
HMGB3P11-201ENST00000440127 IGHV3OR16-9A0A0B4J2B5 98 aa2.3□□□□□ -2.04
HMGB3P11-201ENST00000440127 LINC00959A0A1B0GUT2 108 aa2.3□□□□□ -2.04
HMGB3P11-201ENST00000440127 C9JAW5 83 aa2.3□□□□□ -2.04
HMGB3P11-201ENST00000440127 SLC25A20O43772 301 aa2.3□□□□□ -2.04
HMGB3P11-201ENST00000440127 ATP5G1P05496 136 aa2.3□□□□□ -2.04
HMGB3P11-201ENST00000440127 SPART-AS1P0CW21 52 aa2.3□□□□□ -2.04
HMGB3P11-201ENST00000440127 DAD1P61803 113 aa2.3□□□□□ -2.04
HMGB3P11-201ENST00000440127 DEFB135Q30KP9 77 aa2.3□□□□□ -2.04
HMGB3P11-201ENST00000440127 DAND5Q8N907 189 aa2.3□□□□□ -2.04
HMGB3P11-201ENST00000440127 PPDPFLQ8WWR9 84 aa2.3□□□□□ -2.04
HMGB3P11-201ENST00000440127 LINC01600Q96MT4 127 aa2.3□□□□□ -2.04
HMGB3P11-201ENST00000440127 SIGMAR1Q99720 223 aa2.3□□□□□ -2.04
HMGB3P11-201ENST00000440127 TOMM7Q9P0U1 55 aa2.3□□□□□ -2.04
HMGB3P11-201ENST00000440127 FAM208BQ5VWN6 2430 aa2.29□□□□□ -2.04
HMGB3P11-201ENST00000440127 DOPEY2Q9Y3R5 2298 aa2.29□□□□□ -2.04
HMGB3P11-201ENST00000440127 IGLV8-61A0A075B6I0 122 aa2.29□□□□□ -2.04
HMGB3P11-201ENST00000440127 A0A096LPF7 62 aa2.29□□□□□ -2.04
HMGB3P11-201ENST00000440127 TRBV10-2A0A0K0K1G8 114 aa2.29□□□□□ -2.04
HMGB3P11-201ENST00000440127 IBA57-AS1B1ANH7 110 aa2.29□□□□□ -2.04
HMGB3P11-201ENST00000440127 COX7A2LO14548 114 aa2.29□□□□□ -2.04
HMGB3P11-201ENST00000440127 DEFB4AO15263 64 aa2.29□□□□□ -2.04
HMGB3P11-201ENST00000440127 LINC00158P58513 81 aa2.29□□□□□ -2.04
HMGB3P11-201ENST00000440127 LCE3EQ5T5B0 92 aa2.29□□□□□ -2.04
HMGB3P11-201ENST00000440127 SOSTDC1Q6X4U4 206 aa2.29□□□□□ -2.04
HMGB3P11-201ENST00000440127 C5orf38Q86SI9 138 aa2.29□□□□□ -2.04
HMGB3P11-201ENST00000440127 ANKRD29Q8N6D5 301 aa2.29□□□□□ -2.04
HMGB3P11-201ENST00000440127 CARD19Q96LW7 228 aa2.29□□□□□ -2.04
HMGB3P11-201ENST00000440127 CELA1Q9UNI1 258 aa2.29□□□□□ -2.04
HMGB3P11-201ENST00000440127 UTP20O75691 2785 aaKnown RBP2.29□□□□□ -2.04
HMGB3P11-201ENST00000440127 POLQO75417 2590 aa2.29□□□□□ -2.04
HMGB3P11-201ENST00000440127 MYO18BQ8IUG5 2567 aa2.29□□□□□ -2.04
HMGB3P11-201ENST00000440127 TRAV13-2A0A0B4J235 113 aa2.28□□□□□ -2.04
HMGB3P11-201ENST00000440127 H3BT86 120 aa2.28□□□□□ -2.04
HMGB3P11-201ENST00000440127 LST1O00453 97 aa2.28□□□□□ -2.04
HMGB3P11-201ENST00000440127 SCGB1A1P11684 91 aa2.28□□□□□ -2.04
HMGB3P11-201ENST00000440127 XCL1P47992 114 aa2.28□□□□□ -2.04
HMGB3P11-201ENST00000440127 REG3AQ06141 175 aa2.28□□□□□ -2.04
HMGB3P11-201ENST00000440127 C2orf82Q6UX34 121 aa2.28□□□□□ -2.04
HMGB3P11-201ENST00000440127 Q8IZM0 81 aa2.28□□□□□ -2.04
HMGB3P11-201ENST00000440127 MIR7-3HGQ8N6C7 128 aa2.28□□□□□ -2.04
HMGB3P11-201ENST00000440127 NKAPP1Q8N9T2 125 aa2.28□□□□□ -2.04
HMGB3P11-201ENST00000440127 Q8NAQ8 132 aa2.28□□□□□ -2.04
HMGB3P11-201ENST00000440127 CLEC2BQ92478 149 aa2.28□□□□□ -2.04
HMGB3P11-201ENST00000440127 SND1-IT1Q9HBX3 110 aa2.28□□□□□ -2.04
HMGB3P11-201ENST00000440127 RETNQ9HD89 108 aa2.28□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 69.7 ms