RNA–Protein interactions for RNA: ENST00000440053.1

VIL1-204, Transcript of villin 1, humanhuman

TSL 1 (best) BASIC

Gene VIL1, Length 1,454 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIL1-204ENST00000440053 C1orf137Q5JT78 98 aa12.72□□□□□ -0.37
VIL1-204ENST00000440053 PAPPA-AS1Q5QFB9 102 aa12.72□□□□□ -0.37
VIL1-204ENST00000440053 HERVK_113P63121 156 aa12.72□□□□□ -0.37
VIL1-204ENST00000440053 C9orf129Q5T035 196 aaKnown RBP12.72□□□□□ -0.37
VIL1-204ENST00000440053 GEMIN7Q9H840 131 aaKnown RBP12.72□□□□□ -0.37
VIL1-204ENST00000440053 NDUFC2-KCTD14E9PQ53 114 aa12.71□□□□□ -0.38
VIL1-204ENST00000440053 CKS1BP61024 79 aa12.71□□□□□ -0.38
VIL1-204ENST00000440053 COX19Q49B96 90 aa12.7□□□□□ -0.38
VIL1-204ENST00000440053 LINC00469Q8N7U9 141 aa12.7□□□□□ -0.38
VIL1-204ENST00000440053 SEC11AP67812 179 aa12.69□□□□□ -0.38
VIL1-204ENST00000440053 REG3GQ6UW15 175 aa12.69□□□□□ -0.38
VIL1-204ENST00000440053 FA2HQ7L5A8 372 aa12.69□□□□□ -0.38
VIL1-204ENST00000440053 Q8IZM0 81 aa12.69□□□□□ -0.38
VIL1-204ENST00000440053 UBR4Q5T4S7 5183 aa12.69□□□□□ -0.38
VIL1-204ENST00000440053 KRTAP10-8P60410 259 aa12.68□□□□□ -0.38
VIL1-204ENST00000440053 CST9LQ9H4G1 147 aa12.68□□□□□ -0.38
VIL1-204ENST00000440053 APOC3P02656 99 aa12.67□□□□□ -0.38
VIL1-204ENST00000440053 URB1-AS1Q96HZ7 61 aa12.66□□□□□ -0.38
VIL1-204ENST00000440053 SMCO4Q9NRQ5 59 aa12.66□□□□□ -0.38
VIL1-204ENST00000440053 TINCRA0A1B0GVN0 87 aa12.65□□□□□ -0.38
VIL1-204ENST00000440053 SMIM1B2RUZ4 78 aa12.65□□□□□ -0.38
VIL1-204ENST00000440053 M0QXV9 152 aa12.65□□□□□ -0.38
VIL1-204ENST00000440053 TRAPPC1Q9Y5R8 145 aa12.65□□□□□ -0.38
VIL1-204ENST00000440053 IGLV7-43P04211 117 aa12.64□□□□□ -0.39
VIL1-204ENST00000440053 XAGE1AQ9HD64 81 aa12.64□□□□□ -0.39
VIL1-204ENST00000440053 A0A096LNJ9 63 aa12.63□□□□□ -0.39
VIL1-204ENST00000440053 PMVKQ15126 192 aa12.63□□□□□ -0.39
VIL1-204ENST00000440053 C18orf32Q8TCD1 76 aa12.63□□□□□ -0.39
VIL1-204ENST00000440053 IGLV5-45A0A087WSX0 123 aa12.62□□□□□ -0.39
VIL1-204ENST00000440053 F8VRH5 84 aa12.62□□□□□ -0.39
VIL1-204ENST00000440053 SPINK8P0C7L1 97 aa12.62□□□□□ -0.39
VIL1-204ENST00000440053 LINC01549A6NIU2 74 aa12.61□□□□□ -0.39
VIL1-204ENST00000440053 UBE2BP63146 152 aa12.61□□□□□ -0.39
VIL1-204ENST00000440053 PMCHL1Q16048 86 aa12.61□□□□□ -0.39
VIL1-204ENST00000440053 COX7B2Q8TF08 81 aa12.61□□□□□ -0.39
VIL1-204ENST00000440053 LINC00614P0C842 121 aa12.6□□□□□ -0.39
VIL1-204ENST00000440053 PDZD11Q5EBL8 140 aa12.6□□□□□ -0.39
VIL1-204ENST00000440053 NDUFA6P56556 154 aa12.59□□□□□ -0.39
VIL1-204ENST00000440053 C22orf24Q9Y442 160 aa12.59□□□□□ -0.39
VIL1-204ENST00000440053 SNAPINO95295 136 aa12.58□□□□□ -0.4
VIL1-204ENST00000440053 RAB5BP61020 215 aa12.57□□□□□ -0.4
VIL1-204ENST00000440053 SVBPQ8N300 66 aa12.57□□□□□ -0.4
VIL1-204ENST00000440053 CXCL5P42830 114 aa12.56□□□□□ -0.4
VIL1-204ENST00000440053 DIRC1Q969H9 104 aa12.55□□□□□ -0.4
VIL1-204ENST00000440053 NDUFA5Q16718 116 aa12.54□□□□□ -0.4
VIL1-204ENST00000440053 YPEL4Q96NS1 127 aa12.54□□□□□ -0.4
VIL1-204ENST00000440053 H0Y9J4 135 aa12.53□□□□□ -0.4
VIL1-204ENST00000440053 HBDP02042 147 aa12.53□□□□□ -0.4
VIL1-204ENST00000440053 IGLC3P0DOY3 106 aa12.53□□□□□ -0.4
VIL1-204ENST00000440053 PRR26Q8N8Z3 221 aa12.53□□□□□ -0.4
VIL1-204ENST00000440053 ZNF22P17026 224 aaPredicted RBP12.52□□□□□ -0.41
VIL1-204ENST00000440053 H3BRM9 83 aa12.51□□□□□ -0.41
VIL1-204ENST00000440053 BAGE3Q86Y29 109 aa12.5□□□□□ -0.41
VIL1-204ENST00000440053 LRP2P98164 4655 aa12.49□□□□□ -0.41
VIL1-204ENST00000440053 IGLV5-39A0A0G2JS06 123 aa12.48□□□□□ -0.41
VIL1-204ENST00000440053 LBHQ53QV2 105 aaPredicted RBP12.48□□□□□ -0.41
VIL1-204ENST00000440053 MRPL55Q7Z7F7 128 aaKnown RBP12.48□□□□□ -0.41
VIL1-204ENST00000440053 C11orf86A6NJI1 115 aa12.47□□□□□ -0.41
VIL1-204ENST00000440053 RPL37AP8A6NKH3 93 aa12.47□□□□□ -0.41
VIL1-204ENST00000440053 KRTAP1-4P0C5Y4 121 aa12.47□□□□□ -0.41
VIL1-204ENST00000440053 LINC00167Q96N53 147 aa12.47□□□□□ -0.41
VIL1-204ENST00000440053 GAGE10A6NGK3 116 aa12.46□□□□□ -0.41
VIL1-204ENST00000440053 ATP5LO75964 103 aa12.46□□□□□ -0.41
VIL1-204ENST00000440053 PFN2P35080 140 aa12.46□□□□□ -0.41
VIL1-204ENST00000440053 CBLN2Q8IUK8 224 aa12.46□□□□□ -0.41
VIL1-204ENST00000440053 TP73-AS1Q9UF72 201 aa12.46□□□□□ -0.42
VIL1-204ENST00000440053 ZNF861PO60384 105 aa12.45□□□□□ -0.42
VIL1-204ENST00000440053 ZNF625Q96I27 306 aaPredicted RBP12.45□□□□□ -0.42
VIL1-204ENST00000440053 SCO1O75880 301 aa12.44□□□□□ -0.42
VIL1-204ENST00000440053 TMEM170BQ5T4T1 132 aa12.44□□□□□ -0.42
VIL1-204ENST00000440053 NUPR1O60356 82 aa12.43□□□□□ -0.42
VIL1-204ENST00000440053 CHTOPQ9Y3Y2 248 aaKnown RBP12.42□□□□□ -0.42
VIL1-204ENST00000440053 SLC7A5P1Q8MH63 180 aa12.4□□□□□ -0.42
VIL1-204ENST00000440053 CHCHD1Q96BP2 118 aaKnown RBP12.4□□□□□ -0.42
VIL1-204ENST00000440053 FAM19A2Q8N3H0 131 aa12.4□□□□□ -0.43
VIL1-204ENST00000440053 ERG28Q9UKR5 140 aa12.4□□□□□ -0.43
VIL1-204ENST00000440053 IGLV5-37A0A075B6J1 123 aa12.39□□□□□ -0.43
VIL1-204ENST00000440053 BCE1O60756 84 aa12.39□□□□□ -0.43
VIL1-204ENST00000440053 IFI27L1Q96BM0 104 aa12.39□□□□□ -0.43
VIL1-204ENST00000440053 NKAPP1Q8N9T2 125 aa12.38□□□□□ -0.43
VIL1-204ENST00000440053 SND1-IT1Q9HBX3 110 aa12.38□□□□□ -0.43
VIL1-204ENST00000440053 IGLV1-50A0A075B6I6 118 aa12.37□□□□□ -0.43
VIL1-204ENST00000440053 TRGC2P03986 189 aa12.37□□□□□ -0.43
VIL1-204ENST00000440053 Q8NDZ9 215 aa12.37□□□□□ -0.43
VIL1-204ENST00000440053 IGKV2-28A0A075B6P5 120 aa12.35□□□□□ -0.43
VIL1-204ENST00000440053 TRAV12-1A0A0B4J245 112 aa12.35□□□□□ -0.43
VIL1-204ENST00000440053 TMEM223A0PJW6 202 aa12.35□□□□□ -0.43
VIL1-204ENST00000440053 IGKV2D-28P01615 120 aa12.35□□□□□ -0.43
VIL1-204ENST00000440053 VPREB1P12018 145 aa12.34□□□□□ -0.43
VIL1-204ENST00000440053 LPAP08519 4548 aa12.34□□□□□ -0.43
VIL1-204ENST00000440053 A0A0U1RRA0 63 aa12.34□□□□□ -0.43
VIL1-204ENST00000440053 RPL28P46779 137 aaKnown RBP12.34□□□□□ -0.43
VIL1-204ENST00000440053 RNF213Q63HN8 5207 aa12.33□□□□□ -0.44
VIL1-204ENST00000440053 HSBP1O75506 76 aa12.33□□□□□ -0.44
VIL1-204ENST00000440053 COX17Q14061 63 aa12.33□□□□□ -0.44
VIL1-204ENST00000440053 LINC00310P59036 64 aa12.32□□□□□ -0.44
VIL1-204ENST00000440053 H0Y8G0 127 aa12.31□□□□□ -0.44
VIL1-204ENST00000440053 ANAPC11Q9NYG5 84 aa12.31□□□□□ -0.44
VIL1-204ENST00000440053 LINC00158P58513 81 aa12.3□□□□□ -0.44
VIL1-204ENST00000440053 KRTAP13-1Q8IUC0 172 aa12.3□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms