RNA–Protein interactions for RNA: ENST00000439958.7

CPSF7-205, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CPSF7, Length 3,524 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-205ENST00000439958 CFC1P0CG37 223 aa10.24□□□□□ -0.77
CPSF7-205ENST00000439958 UBE2DNLQ8IWF7 75 aa10.24□□□□□ -0.77
CPSF7-205ENST00000439958 SPANXB1Q9NS25 103 aaPredicted RBP10.24□□□□□ -0.77
CPSF7-205ENST00000439958 A0A1W2PPM0 123 aa10.24□□□□□ -0.77
CPSF7-205ENST00000439958 MIAQ16674 131 aa10.24□□□□□ -0.77
CPSF7-205ENST00000439958 C9orf116Q5BN46 136 aaPredicted RBP10.24□□□□□ -0.77
CPSF7-205ENST00000439958 ENHOQ6UWT2 76 aa10.24□□□□□ -0.77
CPSF7-205ENST00000439958 C6orf223Q8N319 242 aa10.23□□□□□ -0.77
CPSF7-205ENST00000439958 C1orf43Q9BWL3 253 aa10.23□□□□□ -0.77
CPSF7-205ENST00000439958 SPAG11BQ08648 103 aa10.22□□□□□ -0.77
CPSF7-205ENST00000439958 PRO1854Q9UHT4 67 aa10.22□□□□□ -0.77
CPSF7-205ENST00000439958 UBE2V1Q13404 147 aa10.22□□□□□ -0.77
CPSF7-205ENST00000439958 LITAFQ99732 161 aa10.22□□□□□ -0.77
CPSF7-205ENST00000439958 GTF2H5Q6ZYL4 71 aa10.21□□□□□ -0.77
CPSF7-205ENST00000439958 H3BNG1 76 aa10.21□□□□□ -0.77
CPSF7-205ENST00000439958 MEGF8Q7Z7M0 2845 aa10.21□□□□□ -0.78
CPSF7-205ENST00000439958 B9D2Q9BPU9 175 aa10.21□□□□□ -0.78
CPSF7-205ENST00000439958 FAM19A3Q7Z5A8 133 aa10.2□□□□□ -0.78
CPSF7-205ENST00000439958 ERG28Q9UKR5 140 aa10.2□□□□□ -0.78
CPSF7-205ENST00000439958 LINC00588Q9Y4M8 146 aa10.2□□□□□ -0.78
CPSF7-205ENST00000439958 HERV-K104P63124 156 aa10.2□□□□□ -0.78
CPSF7-205ENST00000439958 LINC00308Q8TCZ7 52 aa10.2□□□□□ -0.78
CPSF7-205ENST00000439958 LECT2O14960 151 aa10.2□□□□□ -0.78
CPSF7-205ENST00000439958 TSPAN13O95857 204 aa10.2□□□□□ -0.78
CPSF7-205ENST00000439958 C15orf53Q8NAA6 179 aa10.19□□□□□ -0.78
CPSF7-205ENST00000439958 H3BMG7 143 aa10.19□□□□□ -0.78
CPSF7-205ENST00000439958 TRAV16A0A0A6YYK6 109 aaPredicted RBP10.19□□□□□ -0.78
CPSF7-205ENST00000439958 ZNF561-AS1K7EIQ3 104 aa10.19□□□□□ -0.78
CPSF7-205ENST00000439958 FOXI1Q12951 378 aa10.19□□□□□ -0.78
CPSF7-205ENST00000439958 OR13C6PQ8NH95 151 aa10.19□□□□□ -0.78
CPSF7-205ENST00000439958 HUWE1Q7Z6Z7 4374 aaKnown RBP10.18□□□□□ -0.78
CPSF7-205ENST00000439958 UNQ6190/PRO20217Q6UXQ8 127 aa10.18□□□□□ -0.78
CPSF7-205ENST00000439958 RPL13AP40429 203 aaKnown RBP10.17□□□□□ -0.78
CPSF7-205ENST00000439958 DNAH3Q8TD57 4116 aa10.17□□□□□ -0.78
CPSF7-205ENST00000439958 SOSTDC1Q6X4U4 206 aa10.17□□□□□ -0.78
CPSF7-205ENST00000439958 SPANXDQ9BXN6 97 aa10.16□□□□□ -0.78
CPSF7-205ENST00000439958 SPANXCQ9NY87 97 aa10.16□□□□□ -0.78
CPSF7-205ENST00000439958 C10orf25Q5T742 122 aa10.15□□□□□ -0.78
CPSF7-205ENST00000439958 Q8IZM0 81 aa10.15□□□□□ -0.78
CPSF7-205ENST00000439958 SND1-IT1Q9HBX3 110 aa10.15□□□□□ -0.78
CPSF7-205ENST00000439958 PRR34Q9NV39 138 aa10.15□□□□□ -0.78
CPSF7-205ENST00000439958 K7EP34 96 aa10.15□□□□□ -0.79
CPSF7-205ENST00000439958 CAMK2N2Q96S95 79 aa10.14□□□□□ -0.79
CPSF7-205ENST00000439958 TRAV8-4A0A0B4J246 113 aa10.13□□□□□ -0.79
CPSF7-205ENST00000439958 IFITM1P13164 125 aa10.13□□□□□ -0.79
CPSF7-205ENST00000439958 LINC01556Q5JQF7 62 aa10.13□□□□□ -0.79
CPSF7-205ENST00000439958 TIMM17BO60830 172 aa10.13□□□□□ -0.79
CPSF7-205ENST00000439958 PRR3P79522 188 aaKnown RBP10.12□□□□□ -0.79
CPSF7-205ENST00000439958 COPS9Q8WXC6 57 aa10.12□□□□□ -0.79
CPSF7-205ENST00000439958 A0A1B0GWB2 263 aa10.12□□□□□ -0.79
CPSF7-205ENST00000439958 IBA57-AS1B1ANH7 110 aa10.12□□□□□ -0.79
CPSF7-205ENST00000439958 XAGE1AQ9HD64 81 aa10.12□□□□□ -0.79
CPSF7-205ENST00000439958 A0A0B4J2C4 111 aa10.1□□□□□ -0.79
CPSF7-205ENST00000439958 KIAA0087Q14695 138 aa10.1□□□□□ -0.79
CPSF7-205ENST00000439958 PSCAO43653 123 aa10.1□□□□□ -0.79
CPSF7-205ENST00000439958 GAGE2EQ4V326 116 aa10.1□□□□□ -0.79
CPSF7-205ENST00000439958 GAGE2DQ9UEU5 116 aa10.1□□□□□ -0.79
CPSF7-205ENST00000439958 LYRM7Q5U5X0 104 aa10.08□□□□□ -0.8
CPSF7-205ENST00000439958 M0R2N4 97 aa10.08□□□□□ -0.8
CPSF7-205ENST00000439958 TRIAP1O43715 76 aa10.08□□□□□ -0.8
CPSF7-205ENST00000439958 COX6CP09669 75 aa10.08□□□□□ -0.8
CPSF7-205ENST00000439958 CASC10Q5T4H9 136 aa10.08□□□□□ -0.8
CPSF7-205ENST00000439958 CLEC2BQ92478 149 aa10.08□□□□□ -0.8
CPSF7-205ENST00000439958 KLK5Q9Y337 293 aaPredicted RBP10.08□□□□□ -0.8
CPSF7-205ENST00000439958 FBN3Q75N90 2809 aa10.07□□□□□ -0.8
CPSF7-205ENST00000439958 NCR3O14931 201 aa10.07□□□□□ -0.8
CPSF7-205ENST00000439958 TCL1BO95988 128 aa10.07□□□□□ -0.8
CPSF7-205ENST00000439958 DNAH10OSP0CZ25 163 aa10.07□□□□□ -0.8
CPSF7-205ENST00000439958 CXCL5P42830 114 aa10.07□□□□□ -0.8
CPSF7-205ENST00000439958 PRKDCP78527 4128 aaKnown RBP10.06□□□□□ -0.8
CPSF7-205ENST00000439958 NHLRC4P0CG21 123 aaPredicted RBP10.05□□□□□ -0.8
CPSF7-205ENST00000439958 WFDC2Q14508 124 aa10.05□□□□□ -0.8
CPSF7-205ENST00000439958 DNAH9Q9NYC9 4486 aa10.05□□□□□ -0.8
CPSF7-205ENST00000439958 RNF151Q2KHN1 245 aa10.05□□□□□ -0.8
CPSF7-205ENST00000439958 LYSTQ99698 3801 aa10.04□□□□□ -0.8
CPSF7-205ENST00000439958 C9JAW5 83 aa10.04□□□□□ -0.8
CPSF7-205ENST00000439958 Q6ZRU5 148 aa10.04□□□□□ -0.8
CPSF7-205ENST00000439958 LINC00337Q8N6G1 96 aa10.04□□□□□ -0.8
CPSF7-205ENST00000439958 C6orf48Q9UBA6 75 aa10.03□□□□□ -0.8
CPSF7-205ENST00000439958 ETDBQ3ZM63 59 aa10.03□□□□□ -0.8
CPSF7-205ENST00000439958 USP17L23D6RBM5 183 aa10.02□□□□□ -0.8
CPSF7-205ENST00000439958 RPL18AQ02543 176 aaKnown RBP10.02□□□□□ -0.8
CPSF7-205ENST00000439958 S100A7L2Q5SY68 101 aa10.02□□□□□ -0.8
CPSF7-205ENST00000439958 C15orf56Q8N910 161 aa10.02□□□□□ -0.8
CPSF7-205ENST00000439958 IGLV2-33A0A075B6J2 118 aaPredicted RBP10.01□□□□□ -0.81
CPSF7-205ENST00000439958 NUPR2A6NF83 97 aa10.01□□□□□ -0.81
CPSF7-205ENST00000439958 TRAV13-2A0A0B4J235 113 aa10.01□□□□□ -0.81
CPSF7-205ENST00000439958 LINC01561Q8N1V8 128 aa10.01□□□□□ -0.81
CPSF7-205ENST00000439958 NTN5Q8WTR8 489 aaPredicted RBP10.01□□□□□ -0.81
CPSF7-205ENST00000439958 APLNQ9ULZ1 77 aa10□□□□□ -0.81
CPSF7-205ENST00000439958 IGKV2-28A0A075B6P5 120 aa10□□□□□ -0.81
CPSF7-205ENST00000439958 IGKV2D-28P01615 120 aa10□□□□□ -0.81
CPSF7-205ENST00000439958 RMI2Q96E14 147 aa10□□□□□ -0.81
CPSF7-205ENST00000439958 KRTAP1-5Q9BYS1 174 aa10□□□□□ -0.81
CPSF7-205ENST00000439958 SYCNQ0VAF6 134 aa9.99□□□□□ -0.81
CPSF7-205ENST00000439958 ATXN8Q156A1 80 aa9.98□□□□□ -0.81
CPSF7-205ENST00000439958 KRTAP26-1Q6PEX3 210 aa9.98□□□□□ -0.81
CPSF7-205ENST00000439958 TRBV20-1A0A075B6N2 111 aa9.97□□□□□ -0.81
CPSF7-205ENST00000439958 A0A1B0GV72 72 aa9.97□□□□□ -0.81
CPSF7-205ENST00000439958 CSMD3Q7Z407 3707 aa9.97□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 89.3 ms