RNA–Protein interactions for RNA: ENST00000439346.5

CHEK2-217, Transcript of checkpoint kinase 2, humanhuman

TSL 4

Gene CHEK2, Length 553 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHEK2-217ENST00000439346 PHRF1Q9P1Y6 1649 aaKnown RBP1.92□□□□□ -2.1
CHEK2-217ENST00000439346 BTAF1O14981 1849 aa1.92□□□□□ -2.1
CHEK2-217ENST00000439346 G3V318 75 aa1.92□□□□□ -2.1
CHEK2-217ENST00000439346 HMGA1P17096 107 aaKnown RBP1.92□□□□□ -2.1
CHEK2-217ENST00000439346 SCN7AQ01118 1682 aa1.92□□□□□ -2.1
CHEK2-217ENST00000439346 RGPD8O14715 1765 aaPredicted RBP1.92□□□□□ -2.1
CHEK2-217ENST00000439346 RGPD5Q99666 1765 aa1.92□□□□□ -2.1
CHEK2-217ENST00000439346 RAPGEF6Q8TEU7 1601 aa1.91□□□□□ -2.1
CHEK2-217ENST00000439346 ARFGEF1Q9Y6D6 1849 aa1.91□□□□□ -2.1
CHEK2-217ENST00000439346 CD163L1Q9NR16 1453 aa1.91□□□□□ -2.1
CHEK2-217ENST00000439346 A0A0D9SFI3 127 aa1.91□□□□□ -2.1
CHEK2-217ENST00000439346 LINC01549A6NIU2 74 aa1.91□□□□□ -2.1
CHEK2-217ENST00000439346 ANKRD50Q9ULJ7 1429 aa1.91□□□□□ -2.1
CHEK2-217ENST00000439346 PDCD11Q14690 1871 aaKnown RBP1.9□□□□□ -2.1
CHEK2-217ENST00000439346 RGPD2P0DJD1 1756 aa1.9□□□□□ -2.1
CHEK2-217ENST00000439346 KRTAP12-1P59990 96 aa1.9□□□□□ -2.11
CHEK2-217ENST00000439346 RPL37P61927 97 aaKnown RBP1.9□□□□□ -2.11
CHEK2-217ENST00000439346 FXYD6Q9H0Q3 95 aa1.9□□□□□ -2.11
CHEK2-217ENST00000439346 ICE1Q9Y2F5 2266 aa1.9□□□□□ -2.11
CHEK2-217ENST00000439346 KNDC1Q76NI1 1749 aa1.9□□□□□ -2.11
CHEK2-217ENST00000439346 LMTK2Q8IWU2 1503 aa1.9□□□□□ -2.11
CHEK2-217ENST00000439346 GBF1Q92538 1859 aa1.9□□□□□ -2.11
CHEK2-217ENST00000439346 COL5A1P20908 1838 aaPredicted RBP1.89□□□□□ -2.11
CHEK2-217ENST00000439346 PCDH15Q96QU1 1955 aa1.89□□□□□ -2.11
CHEK2-217ENST00000439346 TIAM1Q13009 1591 aa1.89□□□□□ -2.11
CHEK2-217ENST00000439346 CDC42BPGQ6DT37 1551 aa1.89□□□□□ -2.11
CHEK2-217ENST00000439346 UBE2DNLQ8IWF7 75 aa1.88□□□□□ -2.11
CHEK2-217ENST00000439346 PLXNC1O60486 1568 aa1.88□□□□□ -2.11
CHEK2-217ENST00000439346 DIP2AQ14689 1571 aa1.88□□□□□ -2.11
CHEK2-217ENST00000439346 SAMD9Q5K651 1589 aa1.88□□□□□ -2.11
CHEK2-217ENST00000439346 CEP170BQ9Y4F5 1589 aaPredicted RBP1.88□□□□□ -2.11
CHEK2-217ENST00000439346 IFT172Q9UG01 1749 aa1.88□□□□□ -2.11
CHEK2-217ENST00000439346 TARBP1Q13395 1621 aaKnown RBP1.88□□□□□ -2.11
CHEK2-217ENST00000439346 PREX2Q70Z35 1606 aa1.88□□□□□ -2.11
CHEK2-217ENST00000439346 SDK1Q7Z5N4 2213 aa1.87□□□□□ -2.11
CHEK2-217ENST00000439346 LAMA4Q16363 1823 aa1.87□□□□□ -2.11
CHEK2-217ENST00000439346 LINC00959A0A1B0GUT2 108 aa1.87□□□□□ -2.11
CHEK2-217ENST00000439346 FXYD6P3P58550 94 aa1.87□□□□□ -2.11
CHEK2-217ENST00000439346 ENHOQ6UWT2 76 aa1.87□□□□□ -2.11
CHEK2-217ENST00000439346 KDM3BQ7LBC6 1761 aa1.87□□□□□ -2.11
CHEK2-217ENST00000439346 TNRC6BQ9UPQ9 1833 aaKnown RBP1.87□□□□□ -2.11
CHEK2-217ENST00000439346 LOC285556D6RIA3 1793 aa1.86□□□□□ -2.11
CHEK2-217ENST00000439346 SIPA1L3O60292 1781 aaPredicted RBP1.86□□□□□ -2.11
CHEK2-217ENST00000439346 SNRPGP15A8MWD9 76 aa1.86□□□□□ -2.11
CHEK2-217ENST00000439346 PRB1P04280 392 aa1.86□□□□□ -2.11
CHEK2-217ENST00000439346 COX7BP24311 80 aa1.86□□□□□ -2.11
CHEK2-217ENST00000439346 DEFB119Q8N690 84 aa1.86□□□□□ -2.11
CHEK2-217ENST00000439346 UBL5Q9BZL1 73 aa1.86□□□□□ -2.11
CHEK2-217ENST00000439346 PIK3C2BO00750 1634 aa1.86□□□□□ -2.11
CHEK2-217ENST00000439346 LRP6O75581 1613 aa1.86□□□□□ -2.11
CHEK2-217ENST00000439346 RALGAPBQ86X10 1494 aa1.86□□□□□ -2.11
CHEK2-217ENST00000439346 ZNF236Q9UL36 1845 aa1.86□□□□□ -2.11
CHEK2-217ENST00000439346 FBN1P35555 2871 aaKnown RBP1.86□□□□□ -2.11
CHEK2-217ENST00000439346 SHPRHQ149N8 1683 aa1.86□□□□□ -2.11
CHEK2-217ENST00000439346 VWDEQ8N2E2 1590 aa1.85□□□□□ -2.11
CHEK2-217ENST00000439346 ABCA9Q8IUA7 1624 aa1.85□□□□□ -2.11
CHEK2-217ENST00000439346 FCER1GP30273 86 aa1.85□□□□□ -2.11
CHEK2-217ENST00000439346 RPL38P63173 70 aaKnown RBP1.85□□□□□ -2.11
CHEK2-217ENST00000439346 KRTAP13-1Q8IUC0 172 aa1.85□□□□□ -2.11
CHEK2-217ENST00000439346 PRXQ9BXM0 1461 aa1.85□□□□□ -2.11
CHEK2-217ENST00000439346 RGPD1P0DJD0 1748 aa1.85□□□□□ -2.11
CHEK2-217ENST00000439346 E9PCH4 1651 aa1.84□□□□□ -2.11
CHEK2-217ENST00000439346 LRRC37A2A6NM11 1700 aa1.84□□□□□ -2.11
CHEK2-217ENST00000439346 LCE6AA0A183 80 aa1.84□□□□□ -2.11
CHEK2-217ENST00000439346 LRRC7Q96NW7 1537 aa1.84□□□□□ -2.11
CHEK2-217ENST00000439346 MYO7BQ6PIF6 2116 aa1.84□□□□□ -2.12
CHEK2-217ENST00000439346 HMCN1Q96RW7 5635 aa1.82□□□□□ -2.12
CHEK2-217ENST00000439346 SSC5DA1L4H1 1573 aa1.82□□□□□ -2.12
CHEK2-217ENST00000439346 USP32Q8NFA0 1604 aa1.82□□□□□ -2.12
CHEK2-217ENST00000439346 NDUFA4O00483 81 aa1.82□□□□□ -2.12
CHEK2-217ENST00000439346 KRTAP12-4P60329 112 aa1.82□□□□□ -2.12
CHEK2-217ENST00000439346 CRYBG1Q9Y4K1 1723 aa1.82□□□□□ -2.12
CHEK2-217ENST00000439346 ARFGEF2Q9Y6D5 1785 aa1.82□□□□□ -2.12
CHEK2-217ENST00000439346 CPS1P31327 1500 aa1.81□□□□□ -2.12
CHEK2-217ENST00000439346 INTS1Q8N201 2190 aaKnown RBP1.81□□□□□ -2.12
CHEK2-217ENST00000439346 CACNA1GO43497 2377 aa1.81□□□□□ -2.12
CHEK2-217ENST00000439346 FCGBPQ9Y6R7 5405 aaPredicted RBP1.81□□□□□ -2.12
CHEK2-217ENST00000439346 ERCC6L2Q5T890 1561 aa1.81□□□□□ -2.12
CHEK2-217ENST00000439346 ALKQ9UM73 1620 aa1.8□□□□□ -2.12
CHEK2-217ENST00000439346 C5P01031 1676 aa1.8□□□□□ -2.12
CHEK2-217ENST00000439346 COL4A1P02462 1669 aa1.8□□□□□ -2.12
CHEK2-217ENST00000439346 SPTY2D1-AS1A0A0U1RR47 76 aa1.8□□□□□ -2.12
CHEK2-217ENST00000439346 DNAJC13O75165 2243 aa1.8□□□□□ -2.12
CHEK2-217ENST00000439346 NHSL1Q5SYE7 1610 aa1.8□□□□□ -2.12
CHEK2-217ENST00000439346 NUP188Q5SRE5 1749 aa1.8□□□□□ -2.12
CHEK2-217ENST00000439346 ITSN1Q15811 1721 aa1.79□□□□□ -2.12
CHEK2-217ENST00000439346 PAPPAQ13219 1627 aa1.78□□□□□ -2.12
CHEK2-217ENST00000439346 KRTAP12-3P60328 96 aa1.78□□□□□ -2.12
CHEK2-217ENST00000439346 CPSF4LA6NMK7 179 aaKnown RBP1.77□□□□□ -2.13
CHEK2-217ENST00000439346 LYNX1P0DP58 116 aa1.77□□□□□ -2.13
CHEK2-217ENST00000439346 CRIPTQ9P021 101 aa1.77□□□□□ -2.13
CHEK2-217ENST00000439346 MAP2P11137 1827 aaKnown RBP1.77□□□□□ -2.13
CHEK2-217ENST00000439346 KIAA0556O60303 1618 aa1.77□□□□□ -2.13
CHEK2-217ENST00000439346 FANCD2Q9BXW9 1451 aa1.76□□□□□ -2.13
CHEK2-217ENST00000439346 BAHCC1Q9P281 2608 aa1.76□□□□□ -2.13
CHEK2-217ENST00000439346 K7EIL1 84 aa1.76□□□□□ -2.13
CHEK2-217ENST00000439346 ARL14EPLP0DKL9 152 aa1.76□□□□□ -2.13
CHEK2-217ENST00000439346 NMES1Q9C002 83 aa1.76□□□□□ -2.13
CHEK2-217ENST00000439346 XRN1Q8IZH2 1706 aaKnown RBP1.76□□□□□ -2.13
CHEK2-217ENST00000439346 CFAP43Q8NDM7 1665 aa1.76□□□□□ -2.13
Retrieved 100 of 20,778 RNA–protein pairs in 74.2 ms