RNA–Protein interactions for RNA: ENST00000439274.6

APP-208, Transcript of amyloid beta precursor protein, humanhuman

TSL 1 (best) BASIC

Gene APP, Length 2,517 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APP-208ENST00000439274 XCL1P47992 114 aa10.71□□□□□ -0.7
APP-208ENST00000439274 GAGE2AQ6NT46 116 aa10.71□□□□□ -0.7
APP-208ENST00000439274 SMR3AQ99954 134 aa10.71□□□□□ -0.7
APP-208ENST00000439274 C16orf95Q9H693 158 aa10.71□□□□□ -0.7
APP-208ENST00000439274 A0A096LPF7 62 aa10.7□□□□□ -0.7
APP-208ENST00000439274 FAM236AA0A1B0GUQ0 79 aa10.69□□□□□ -0.7
APP-208ENST00000439274 FAM236BA0A1B0GV22 79 aa10.69□□□□□ -0.7
APP-208ENST00000439274 IBA57-AS1B1ANH7 110 aa10.69□□□□□ -0.7
APP-208ENST00000439274 PAX4O43316 350 aa10.69□□□□□ -0.7
APP-208ENST00000439274 GYPEP15421 78 aa10.69□□□□□ -0.7
APP-208ENST00000439274 OR13C6PQ8NH95 151 aa10.68□□□□□ -0.7
APP-208ENST00000439274 DNAL4O96015 105 aa10.68□□□□□ -0.7
APP-208ENST00000439274 C6orf226Q5I0X4 101 aa10.68□□□□□ -0.7
APP-208ENST00000439274 LINC00643Q86TS7 51 aa10.67□□□□□ -0.7
APP-208ENST00000439274 C3orf56Q8N813 242 aa10.66□□□□□ -0.7
APP-208ENST00000439274 LECT2O14960 151 aa10.66□□□□□ -0.7
APP-208ENST00000439274 INAFM2P0DMQ5 153 aa10.66□□□□□ -0.7
APP-208ENST00000439274 OTOGQ6ZRI0 2925 aa10.66□□□□□ -0.7
APP-208ENST00000439274 SLPIP03973 132 aa10.65□□□□□ -0.7
APP-208ENST00000439274 SDIM1Q6ZPB5 146 aa10.65□□□□□ -0.7
APP-208ENST00000439274 C14orf132Q9NPU4 83 aa10.65□□□□□ -0.7
APP-208ENST00000439274 IMUPQ9GZP8 106 aa10.64□□□□□ -0.71
APP-208ENST00000439274 KRTAP10-3P60369 221 aa10.63□□□□□ -0.71
APP-208ENST00000439274 KIR2DL5BQ8NHK3 375 aa10.63□□□□□ -0.71
APP-208ENST00000439274 VWFP04275 2813 aa10.63□□□□□ -0.71
APP-208ENST00000439274 H0YGX0 51 aa10.63□□□□□ -0.71
APP-208ENST00000439274 PRR3P79522 188 aaKnown RBP10.63□□□□□ -0.71
APP-208ENST00000439274 SS18Q15532 418 aa10.62□□□□□ -0.71
APP-208ENST00000439274 X6R8D5 127 aa10.62□□□□□ -0.71
APP-208ENST00000439274 Q8N3U1 123 aa10.62□□□□□ -0.71
APP-208ENST00000439274 LINC00612Q8N6U2 182 aa10.62□□□□□ -0.71
APP-208ENST00000439274 NCR3O14931 201 aa10.61□□□□□ -0.71
APP-208ENST00000439274 LY6G6DO95868 133 aa10.61□□□□□ -0.71
APP-208ENST00000439274 DEFB4AO15263 64 aa10.61□□□□□ -0.71
APP-208ENST00000439274 LINC00482Q8N8I6 264 aa10.6□□□□□ -0.71
APP-208ENST00000439274 IGLV10-54A0A075B6I4 117 aa10.59□□□□□ -0.71
APP-208ENST00000439274 A0A1B0GUV1 79 aa10.59□□□□□ -0.71
APP-208ENST00000439274 HILS1P60008 231 aa10.59□□□□□ -0.71
APP-208ENST00000439274 Q8IZM0 81 aa10.59□□□□□ -0.71
APP-208ENST00000439274 SPATA3Q8NHX4 192 aa10.59□□□□□ -0.71
APP-208ENST00000439274 LINC00269Q8N2A0 174 aa10.59□□□□□ -0.71
APP-208ENST00000439274 PRO0255Q9UI72 69 aa10.59□□□□□ -0.71
APP-208ENST00000439274 OBSCN-AS1Q96MR7 158 aa10.57□□□□□ -0.72
APP-208ENST00000439274 NANOS2P60321 138 aaKnown RBP10.57□□□□□ -0.72
APP-208ENST00000439274 C9orf116Q5BN46 136 aaPredicted RBP10.57□□□□□ -0.72
APP-208ENST00000439274 LINC00846Q9NV44 126 aa10.56□□□□□ -0.72
APP-208ENST00000439274 KLK5Q9Y337 293 aaPredicted RBP10.56□□□□□ -0.72
APP-208ENST00000439274 IGKV3D-7A0A0C4DH55 119 aa10.55□□□□□ -0.72
APP-208ENST00000439274 KIAA0087Q14695 138 aa10.55□□□□□ -0.72
APP-208ENST00000439274 CXCL5P42830 114 aa10.55□□□□□ -0.72
APP-208ENST00000439274 HIVEP2P31629 2446 aa10.55□□□□□ -0.72
APP-208ENST00000439274 CHCHD10Q8WYQ3 142 aaPredicted RBP10.54□□□□□ -0.72
APP-208ENST00000439274 ORMDL1Q9P0S3 153 aa10.54□□□□□ -0.72
APP-208ENST00000439274 DEFB135Q30KP9 77 aa10.54□□□□□ -0.72
APP-208ENST00000439274 SMIM20Q8N5G0 67 aa10.54□□□□□ -0.72
APP-208ENST00000439274 ANGP03950 147 aaKnown RBP10.53□□□□□ -0.72
APP-208ENST00000439274 Q8NDZ9 215 aa10.53□□□□□ -0.72
APP-208ENST00000439274 CFAP161Q6P656 301 aa10.53□□□□□ -0.72
APP-208ENST00000439274 CD164L2Q6UWJ8 174 aa10.53□□□□□ -0.72
APP-208ENST00000439274 INAFM1C9JVW0 142 aa10.52□□□□□ -0.72
APP-208ENST00000439274 NOTCH2Q04721 2471 aa10.51□□□□□ -0.73
APP-208ENST00000439274 REG3AQ06141 175 aa10.51□□□□□ -0.73
APP-208ENST00000439274 C3orf22Q8N5N4 141 aa10.51□□□□□ -0.73
APP-208ENST00000439274 SMIM9A6NGZ8 99 aa10.51□□□□□ -0.73
APP-208ENST00000439274 C9orf153Q5TBE3 101 aa10.51□□□□□ -0.73
APP-208ENST00000439274 LINC01561Q8N1V8 128 aa10.5□□□□□ -0.73
APP-208ENST00000439274 Q8N814 137 aa10.5□□□□□ -0.73
APP-208ENST00000439274 LINC00526Q96FQ7 95 aa10.5□□□□□ -0.73
APP-208ENST00000439274 A0A087WVE0 104 aa10.49□□□□□ -0.73
APP-208ENST00000439274 IGHV4-28A0A0C4DH34 117 aa10.49□□□□□ -0.73
APP-208ENST00000439274 LYRM9A8MSI8 78 aa10.49□□□□□ -0.73
APP-208ENST00000439274 C6orf223Q8N319 242 aa10.49□□□□□ -0.73
APP-208ENST00000439274 CELA1Q9UNI1 258 aa10.49□□□□□ -0.73
APP-208ENST00000439274 TENM1Q9UKZ4 2725 aa10.49□□□□□ -0.73
APP-208ENST00000439274 HIST1H4AP62805 103 aaKnown RBP10.48□□□□□ -0.73
APP-208ENST00000439274 LINC00167Q96N53 147 aa10.48□□□□□ -0.73
APP-208ENST00000439274 HIVEP1P15822 2718 aa10.48□□□□□ -0.73
APP-208ENST00000439274 UQCRQO14949 82 aa10.48□□□□□ -0.73
APP-208ENST00000439274 C10orf25Q5T742 122 aa10.48□□□□□ -0.73
APP-208ENST00000439274 Q6JHZ5 121 aa10.47□□□□□ -0.73
APP-208ENST00000439274 TMEM126AQ9H061 195 aa10.47□□□□□ -0.73
APP-208ENST00000439274 NDUFC2O95298 119 aa10.47□□□□□ -0.73
APP-208ENST00000439274 DAD1P61803 113 aa10.47□□□□□ -0.73
APP-208ENST00000439274 COX17Q14061 63 aa10.47□□□□□ -0.73
APP-208ENST00000439274 C6orf99Q4VX62 202 aa10.47□□□□□ -0.73
APP-208ENST00000439274 HTN3P15516 51 aa10.46□□□□□ -0.73
APP-208ENST00000439274 C2orf48Q96LS8 159 aa10.46□□□□□ -0.73
APP-208ENST00000439274 CCKP06307 115 aa10.46□□□□□ -0.74
APP-208ENST00000439274 UNQ6190/PRO20217Q6UXQ8 127 aa10.46□□□□□ -0.74
APP-208ENST00000439274 NSD1Q96L73 2696 aaPredicted RBP10.46□□□□□ -0.74
APP-208ENST00000439274 SVIPQ8NHG7 77 aa10.45□□□□□ -0.74
APP-208ENST00000439274 COX7CP15954 63 aa10.45□□□□□ -0.74
APP-208ENST00000439274 ATOX1O00244 68 aa10.43□□□□□ -0.74
APP-208ENST00000439274 RPL18AQ02543 176 aaKnown RBP10.43□□□□□ -0.74
APP-208ENST00000439274 S100A7L2Q5SY68 101 aa10.43□□□□□ -0.74
APP-208ENST00000439274 TRRAPQ9Y4A5 3859 aa10.43□□□□□ -0.74
APP-208ENST00000439274 A0A1B0GX51 115 aa10.43□□□□□ -0.74
APP-208ENST00000439274 SPAG11BQ08648 103 aa10.43□□□□□ -0.74
APP-208ENST00000439274 C9orf66Q5T8R8 295 aa10.43□□□□□ -0.74
APP-208ENST00000439274 TMEM256-PLSCR3K7ERE1 68 aa10.42□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 97.3 ms