RNA–Protein interactions for RNA: ENST00000438964.6

ACTN1-204, Transcript of actinin alpha 1, humanhuman

TSL 1 (best) BASIC

Gene ACTN1, Length 3,043 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-204ENST00000438964 Q6JHZ5 121 aa9.39□□□□□ -0.91
ACTN1-204ENST00000438964 RPL35AP18077 110 aaKnown RBP9.39□□□□□ -0.91
ACTN1-204ENST00000438964 ODF3L2Q3SX64 289 aa9.39□□□□□ -0.91
ACTN1-204ENST00000438964 HIVEP2P31629 2446 aa9.39□□□□□ -0.91
ACTN1-204ENST00000438964 C6orf226Q5I0X4 101 aa9.38□□□□□ -0.91
ACTN1-204ENST00000438964 ZNF702PQ9H963 129 aa9.38□□□□□ -0.91
ACTN1-204ENST00000438964 UCNP55089 124 aa9.37□□□□□ -0.91
ACTN1-204ENST00000438964 C9orf116Q5BN46 136 aaPredicted RBP9.37□□□□□ -0.91
ACTN1-204ENST00000438964 PRORYQ9H606 182 aa9.37□□□□□ -0.91
ACTN1-204ENST00000438964 ORMDL1Q9P0S3 153 aa9.37□□□□□ -0.91
ACTN1-204ENST00000438964 M0R2N4 97 aa9.37□□□□□ -0.91
ACTN1-204ENST00000438964 TMEM258P61165 79 aa9.37□□□□□ -0.91
ACTN1-204ENST00000438964 SPATA3Q8NHX4 192 aa9.37□□□□□ -0.91
ACTN1-204ENST00000438964 Q5XG85 94 aa9.36□□□□□ -0.91
ACTN1-204ENST00000438964 SNURFQ9Y675 71 aa9.36□□□□□ -0.91
ACTN1-204ENST00000438964 ZNF462Q96JM2 2506 aa9.36□□□□□ -0.91
ACTN1-204ENST00000438964 CR1P17927 2039 aa9.36□□□□□ -0.91
ACTN1-204ENST00000438964 DEFB114Q30KQ6 69 aa9.35□□□□□ -0.91
ACTN1-204ENST00000438964 IGLV10-54A0A075B6I4 117 aa9.35□□□□□ -0.91
ACTN1-204ENST00000438964 TRGV4A0A0C4DH28 118 aa9.35□□□□□ -0.91
ACTN1-204ENST00000438964 FLNAP21333 2647 aaKnown RBP9.35□□□□□ -0.91
ACTN1-204ENST00000438964 H0YGX0 51 aa9.34□□□□□ -0.91
ACTN1-204ENST00000438964 PF4P02776 101 aa9.34□□□□□ -0.91
ACTN1-204ENST00000438964 ITPR3Q14573 2671 aa9.34□□□□□ -0.91
ACTN1-204ENST00000438964 IGHV3OR16-9A0A0B4J2B5 98 aa9.34□□□□□ -0.91
ACTN1-204ENST00000438964 SCXQ7RTU7 201 aa9.34□□□□□ -0.91
ACTN1-204ENST00000438964 CCKP06307 115 aa9.33□□□□□ -0.92
ACTN1-204ENST00000438964 DEFB130BP0DP73 79 aa9.33□□□□□ -0.92
ACTN1-204ENST00000438964 DEFB130AP0DP74 79 aa9.33□□□□□ -0.92
ACTN1-204ENST00000438964 Q8N3U1 123 aa9.33□□□□□ -0.92
ACTN1-204ENST00000438964 A0A096LNT2 108 aa9.32□□□□□ -0.92
ACTN1-204ENST00000438964 HAMPP81172 84 aa9.32□□□□□ -0.92
ACTN1-204ENST00000438964 OBSCN-AS1Q96MR7 158 aa9.32□□□□□ -0.92
ACTN1-204ENST00000438964 RPS28P62857 69 aaKnown RBP9.32□□□□□ -0.92
ACTN1-204ENST00000438964 VWFP04275 2813 aa9.32□□□□□ -0.92
ACTN1-204ENST00000438964 TRBV6-4A0A1B0GX49 114 aa9.31□□□□□ -0.92
ACTN1-204ENST00000438964 ESM1Q9NQ30 184 aa9.31□□□□□ -0.92
ACTN1-204ENST00000438964 WFDC11Q8NEX6 87 aa9.31□□□□□ -0.92
ACTN1-204ENST00000438964 Q8NDZ9 215 aa9.3□□□□□ -0.92
ACTN1-204ENST00000438964 OVOL2Q9BRP0 275 aa9.3□□□□□ -0.92
ACTN1-204ENST00000438964 NANOS2P60321 138 aaKnown RBP9.29□□□□□ -0.92
ACTN1-204ENST00000438964 C6orf99Q4VX62 202 aa9.29□□□□□ -0.92
ACTN1-204ENST00000438964 FAM19A3Q7Z5A8 133 aa9.29□□□□□ -0.92
ACTN1-204ENST00000438964 TRAV10A0A0B4J240 114 aa9.29□□□□□ -0.92
ACTN1-204ENST00000438964 IBA57-AS1B1ANH7 110 aa9.29□□□□□ -0.92
ACTN1-204ENST00000438964 Q8N814 137 aa9.29□□□□□ -0.92
ACTN1-204ENST00000438964 TRBV10-1A0A0K0K1A3 114 aa9.29□□□□□ -0.92
ACTN1-204ENST00000438964 RMI2Q96E14 147 aa9.29□□□□□ -0.92
ACTN1-204ENST00000438964 TRAV25A0A0B4J276 109 aa9.28□□□□□ -0.92
ACTN1-204ENST00000438964 LAMTOR3Q9UHA4 124 aa9.28□□□□□ -0.92
ACTN1-204ENST00000438964 TRBV6-8A0A0A6YYG3 113 aa9.27□□□□□ -0.93
ACTN1-204ENST00000438964 LINC00959A0A1B0GUT2 108 aa9.27□□□□□ -0.93
ACTN1-204ENST00000438964 LINC00269Q8N2A0 174 aa9.27□□□□□ -0.93
ACTN1-204ENST00000438964 A0A087WZ39 114 aa9.26□□□□□ -0.93
ACTN1-204ENST00000438964 LINC01356Q8N9X3 169 aa9.26□□□□□ -0.93
ACTN1-204ENST00000438964 UBL5Q9BZL1 73 aa9.26□□□□□ -0.93
ACTN1-204ENST00000438964 TMEM86BQ8N661 226 aa9.26□□□□□ -0.93
ACTN1-204ENST00000438964 FAM236DA0A1B0GTK5 79 aa9.25□□□□□ -0.93
ACTN1-204ENST00000438964 GIG44P09565 113 aaPredicted RBP9.25□□□□□ -0.93
ACTN1-204ENST00000438964 FAM236CP0DP71 79 aa9.25□□□□□ -0.93
ACTN1-204ENST00000438964 IL17DQ8TAD2 202 aa9.25□□□□□ -0.93
ACTN1-204ENST00000438964 PLAC8L1A1L4L8 177 aa9.25□□□□□ -0.93
ACTN1-204ENST00000438964 LINC00336Q6ZUF6 198 aa9.24□□□□□ -0.93
ACTN1-204ENST00000438964 UNC79Q9P2D8 2635 aa9.24□□□□□ -0.93
ACTN1-204ENST00000438964 Q6YL49 198 aa9.24□□□□□ -0.93
ACTN1-204ENST00000438964 ZNF843Q8N446 348 aa9.24□□□□□ -0.93
ACTN1-204ENST00000438964 DEFB4AO15263 64 aa9.23□□□□□ -0.93
ACTN1-204ENST00000438964 S100A7L2Q5SY68 101 aa9.23□□□□□ -0.93
ACTN1-204ENST00000438964 C6orf223Q8N319 242 aa9.22□□□□□ -0.93
ACTN1-204ENST00000438964 LINC00474Q9P2X8 69 aa9.22□□□□□ -0.93
ACTN1-204ENST00000438964 PKIGQ9Y2B9 76 aa9.22□□□□□ -0.93
ACTN1-204ENST00000438964 F8P00451 2351 aa9.22□□□□□ -0.93
ACTN1-204ENST00000438964 H7BZZ5 65 aa9.21□□□□□ -0.93
ACTN1-204ENST00000438964 TMEM256-PLSCR3K7ERE1 68 aa9.21□□□□□ -0.93
ACTN1-204ENST00000438964 GYPEP15421 78 aa9.21□□□□□ -0.93
ACTN1-204ENST00000438964 C4orf3Q8WVX3 66 aa9.21□□□□□ -0.93
ACTN1-204ENST00000438964 F8WEM9 126 aa9.21□□□□□ -0.94
ACTN1-204ENST00000438964 Q8N9L7 120 aa9.21□□□□□ -0.94
ACTN1-204ENST00000438964 JMJD7-PLA2G4BH0Y9G9 81 aa9.21□□□□□ -0.94
ACTN1-204ENST00000438964 LY6G6DO95868 133 aa9.21□□□□□ -0.94
ACTN1-204ENST00000438964 LINC01547P58512 204 aaPredicted RBP9.2□□□□□ -0.94
ACTN1-204ENST00000438964 RBM3P98179 157 aaKnown RBP9.2□□□□□ -0.94
ACTN1-204ENST00000438964 LYPD5Q6UWN5 251 aa9.2□□□□□ -0.94
ACTN1-204ENST00000438964 PDZD2O15018 2839 aa9.2□□□□□ -0.94
ACTN1-204ENST00000438964 USP24Q9UPU5 2620 aa9.19□□□□□ -0.94
ACTN1-204ENST00000438964 C10orf25Q5T742 122 aa9.19□□□□□ -0.94
ACTN1-204ENST00000438964 PKD1L1Q8TDX9 2849 aa9.19□□□□□ -0.94
ACTN1-204ENST00000438964 Q6ZQY7 126 aa9.19□□□□□ -0.94
ACTN1-204ENST00000438964 TM2D3Q9BRN9 247 aa9.19□□□□□ -0.94
ACTN1-204ENST00000438964 C1orf43Q9BWL3 253 aa9.19□□□□□ -0.94
ACTN1-204ENST00000438964 CCL24O00175 119 aa9.18□□□□□ -0.94
ACTN1-204ENST00000438964 NDUFC2O95298 119 aa9.18□□□□□ -0.94
ACTN1-204ENST00000438964 KRTAP10-9P60411 292 aa9.18□□□□□ -0.94
ACTN1-204ENST00000438964 Q6ZVQ6 151 aa9.18□□□□□ -0.94
ACTN1-204ENST00000438964 A0A0U1RQV1 116 aa9.17□□□□□ -0.94
ACTN1-204ENST00000438964 Q6ZQT0 140 aa9.17□□□□□ -0.94
ACTN1-204ENST00000438964 NOTCH2Q04721 2471 aa9.17□□□□□ -0.94
ACTN1-204ENST00000438964 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP9.16□□□□□ -0.94
ACTN1-204ENST00000438964 BBC3Q96PG8 261 aaPredicted RBP9.16□□□□□ -0.94
ACTN1-204ENST00000438964 XAGE1AQ9HD64 81 aa9.16□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 102 ms