RNA–Protein interactions for RNA: ENST00000438107.1

FAM239A-202, Transcript of family with sequence similarity 239 member A, humanhuman

TSL 5 BASIC

Gene FAM239A, Length 2,155 nt, Biotype lincRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM239A-202ENST00000438107 DEFB130AP0DP74 79 aa13.41□□□□□ -0.26
FAM239A-202ENST00000438107 Q8IZM0 81 aa13.41□□□□□ -0.26
FAM239A-202ENST00000438107 A0A087WYN8 130 aa13.41□□□□□ -0.26
FAM239A-202ENST00000438107 GYPEP15421 78 aa13.41□□□□□ -0.26
FAM239A-202ENST00000438107 HILS1P60008 231 aa13.41□□□□□ -0.26
FAM239A-202ENST00000438107 HECTD1Q9ULT8 2610 aa13.41□□□□□ -0.26
FAM239A-202ENST00000438107 LY6G6DO95868 133 aa13.4□□□□□ -0.26
FAM239A-202ENST00000438107 ANK3Q12955 4377 aaKnown RBP13.4□□□□□ -0.26
FAM239A-202ENST00000438107 PAX4O43316 350 aa13.39□□□□□ -0.27
FAM239A-202ENST00000438107 SMIM9A6NGZ8 99 aa13.39□□□□□ -0.27
FAM239A-202ENST00000438107 CXCL5P42830 114 aa13.39□□□□□ -0.27
FAM239A-202ENST00000438107 OBSCN-AS1Q96MR7 158 aa13.38□□□□□ -0.27
FAM239A-202ENST00000438107 PRO0255Q9UI72 69 aa13.38□□□□□ -0.27
FAM239A-202ENST00000438107 SETXQ7Z333 2677 aaKnown RBP13.38□□□□□ -0.27
FAM239A-202ENST00000438107 GAGE2AQ6NT46 116 aa13.37□□□□□ -0.27
FAM239A-202ENST00000438107 FAM236AA0A1B0GUQ0 79 aa13.37□□□□□ -0.27
FAM239A-202ENST00000438107 FAM236BA0A1B0GV22 79 aa13.37□□□□□ -0.27
FAM239A-202ENST00000438107 X6R8D5 127 aa13.37□□□□□ -0.27
FAM239A-202ENST00000438107 XCL1P47992 114 aa13.36□□□□□ -0.27
FAM239A-202ENST00000438107 NIPBLQ6KC79 2804 aaeCLIP13.36□□□□□ -0.27
FAM239A-202ENST00000438107 ATP5G1P05496 136 aa13.35□□□□□ -0.27
FAM239A-202ENST00000438107 OR13C6PQ8NH95 151 aa13.35□□□□□ -0.27
FAM239A-202ENST00000438107 C2CD3Q4AC94 2353 aa13.34□□□□□ -0.27
FAM239A-202ENST00000438107 LECT2O14960 151 aa13.34□□□□□ -0.27
FAM239A-202ENST00000438107 SMR3AQ99954 134 aa13.34□□□□□ -0.27
FAM239A-202ENST00000438107 LINC00482Q8N8I6 264 aa13.34□□□□□ -0.27
FAM239A-202ENST00000438107 C11orf68Q9H3H3 251 aaKnown RBP13.33□□□□□ -0.28
FAM239A-202ENST00000438107 JMJD1CQ15652 2540 aa13.33□□□□□ -0.28
FAM239A-202ENST00000438107 LYRM9A8MSI8 78 aa13.32□□□□□ -0.28
FAM239A-202ENST00000438107 KLK5Q9Y337 293 aaPredicted RBP13.32□□□□□ -0.28
FAM239A-202ENST00000438107 COX17Q14061 63 aa13.31□□□□□ -0.28
FAM239A-202ENST00000438107 NOTCH2Q04721 2471 aa13.31□□□□□ -0.28
FAM239A-202ENST00000438107 A0A1B0GX51 115 aa13.31□□□□□ -0.28
FAM239A-202ENST00000438107 NDUFC2O95298 119 aa13.31□□□□□ -0.28
FAM239A-202ENST00000438107 KRTAP10-3P60369 221 aa13.3□□□□□ -0.28
FAM239A-202ENST00000438107 C9orf129Q5T035 196 aaKnown RBP13.3□□□□□ -0.28
FAM239A-202ENST00000438107 CD164L2Q6UWJ8 174 aa13.3□□□□□ -0.28
FAM239A-202ENST00000438107 C14orf132Q9NPU4 83 aa13.3□□□□□ -0.28
FAM239A-202ENST00000438107 ORMDL1Q9P0S3 153 aa13.3□□□□□ -0.28
FAM239A-202ENST00000438107 HIVEP2P31629 2446 aa13.29□□□□□ -0.28
FAM239A-202ENST00000438107 LINC00167Q96N53 147 aa13.29□□□□□ -0.28
FAM239A-202ENST00000438107 KIAA0087Q14695 138 aa13.28□□□□□ -0.28
FAM239A-202ENST00000438107 CLPSL2Q6UWE3 100 aa13.28□□□□□ -0.28
FAM239A-202ENST00000438107 IGHV4-28A0A0C4DH34 117 aa13.27□□□□□ -0.29
FAM239A-202ENST00000438107 CFAP161Q6P656 301 aa13.27□□□□□ -0.29
FAM239A-202ENST00000438107 OTOGQ6ZRI0 2925 aa13.26□□□□□ -0.29
FAM239A-202ENST00000438107 A0A096LPF7 62 aa13.25□□□□□ -0.29
FAM239A-202ENST00000438107 LINC00269Q8N2A0 174 aa13.25□□□□□ -0.29
FAM239A-202ENST00000438107 NANOS2P60321 138 aaKnown RBP13.25□□□□□ -0.29
FAM239A-202ENST00000438107 TMEM126AQ9H061 195 aa13.25□□□□□ -0.29
FAM239A-202ENST00000438107 Q6JHZ5 121 aa13.24□□□□□ -0.29
FAM239A-202ENST00000438107 CHCHD10Q8WYQ3 142 aaPredicted RBP13.24□□□□□ -0.29
FAM239A-202ENST00000438107 HIST1H4AP62805 103 aaKnown RBP13.24□□□□□ -0.29
FAM239A-202ENST00000438107 SLPIP03973 132 aa13.23□□□□□ -0.29
FAM239A-202ENST00000438107 C3orf22Q8N5N4 141 aa13.23□□□□□ -0.29
FAM239A-202ENST00000438107 NCR3O14931 201 aa13.22□□□□□ -0.29
FAM239A-202ENST00000438107 UQCRQO14949 82 aa13.22□□□□□ -0.29
FAM239A-202ENST00000438107 REG3AQ06141 175 aa13.22□□□□□ -0.29
FAM239A-202ENST00000438107 C9orf66Q5T8R8 295 aa13.22□□□□□ -0.29
FAM239A-202ENST00000438107 Q8N814 137 aa13.21□□□□□ -0.29
FAM239A-202ENST00000438107 LINC00846Q9NV44 126 aa13.21□□□□□ -0.29
FAM239A-202ENST00000438107 JMJD7-PLA2G4BH0Y9G9 81 aa13.21□□□□□ -0.3
FAM239A-202ENST00000438107 ANGP03950 147 aaKnown RBP13.21□□□□□ -0.3
FAM239A-202ENST00000438107 MUC7Q8TAX7 377 aa13.2□□□□□ -0.3
FAM239A-202ENST00000438107 TMEM256-PLSCR3K7ERE1 68 aa13.19□□□□□ -0.3
FAM239A-202ENST00000438107 ATOX1O00244 68 aa13.19□□□□□ -0.3
FAM239A-202ENST00000438107 CCKP06307 115 aa13.19□□□□□ -0.3
FAM239A-202ENST00000438107 SVIPQ8NHG7 77 aa13.19□□□□□ -0.3
FAM239A-202ENST00000438107 APOC4P55056 127 aa13.18□□□□□ -0.3
FAM239A-202ENST00000438107 PRR3P79522 188 aaKnown RBP13.18□□□□□ -0.3
FAM239A-202ENST00000438107 LINC00526Q96FQ7 95 aa13.18□□□□□ -0.3
FAM239A-202ENST00000438107 DAD1P61803 113 aa13.18□□□□□ -0.3
FAM239A-202ENST00000438107 DEFB135Q30KP9 77 aa13.17□□□□□ -0.3
FAM239A-202ENST00000438107 C9orf153Q5TBE3 101 aa13.17□□□□□ -0.3
FAM239A-202ENST00000438107 IGLV10-54A0A075B6I4 117 aa13.16□□□□□ -0.3
FAM239A-202ENST00000438107 COX7CP15954 63 aa13.16□□□□□ -0.3
FAM239A-202ENST00000438107 S100A7L2Q5SY68 101 aa13.14□□□□□ -0.31
FAM239A-202ENST00000438107 Q8N3U1 123 aa13.14□□□□□ -0.31
FAM239A-202ENST00000438107 NSD1Q96L73 2696 aaPredicted RBP13.14□□□□□ -0.31
FAM239A-202ENST00000438107 C9orf116Q5BN46 136 aaPredicted RBP13.14□□□□□ -0.31
FAM239A-202ENST00000438107 C2orf48Q96LS8 159 aa13.14□□□□□ -0.31
FAM239A-202ENST00000438107 DEFB4AO15263 64 aa13.13□□□□□ -0.31
FAM239A-202ENST00000438107 MIFP14174 115 aa13.13□□□□□ -0.31
FAM239A-202ENST00000438107 RPL18AQ02543 176 aaKnown RBP13.13□□□□□ -0.31
FAM239A-202ENST00000438107 IGKV3D-7A0A0C4DH55 119 aa13.13□□□□□ -0.31
FAM239A-202ENST00000438107 LELP1Q5T871 98 aa13.13□□□□□ -0.31
FAM239A-202ENST00000438107 INAFM1C9JVW0 142 aa13.11□□□□□ -0.31
FAM239A-202ENST00000438107 C6orf99Q4VX62 202 aa13.11□□□□□ -0.31
FAM239A-202ENST00000438107 Q8NAQ8 132 aa13.11□□□□□ -0.31
FAM239A-202ENST00000438107 A0A0J9YWU9 116 aa13.11□□□□□ -0.31
FAM239A-202ENST00000438107 IGHV4-30-4P0DP06 118 aa13.11□□□□□ -0.31
FAM239A-202ENST00000438107 SPAG11BQ08648 103 aa13.11□□□□□ -0.31
FAM239A-202ENST00000438107 SPATA3Q8NHX4 192 aa13.11□□□□□ -0.31
FAM239A-202ENST00000438107 SMIM20Q8N5G0 67 aa13.1□□□□□ -0.31
FAM239A-202ENST00000438107 Q8NDZ9 215 aa13.1□□□□□ -0.31
FAM239A-202ENST00000438107 LINC00575Q6W349 94 aa13.1□□□□□ -0.31
FAM239A-202ENST00000438107 CELA1Q9UNI1 258 aa13.1□□□□□ -0.31
FAM239A-202ENST00000438107 FN1P02751 2386 aaKnown RBP13.09□□□□□ -0.31
FAM239A-202ENST00000438107 ATP5EP2Q5VTU8 51 aa13.09□□□□□ -0.31
FAM239A-202ENST00000438107 C3orf56Q8N813 242 aa13.09□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 67.1 ms