RNA–Protein interactions for RNA: ENST00000438107.1

FAM239A-202, Transcript of family with sequence similarity 239 member A, humanhuman

TSL 5 BASIC

Gene FAM239A, Length 2,155 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM239A-202ENST00000438107 DEFB130AP0DP74 79 aa13.41□□□□□ -0.26
FAM239A-202ENST00000438107 Q8IZM0 81 aa13.41□□□□□ -0.26
FAM239A-202ENST00000438107 A0A087WYN8 130 aa13.41□□□□□ -0.26
FAM239A-202ENST00000438107 GYPEP15421 78 aa13.41□□□□□ -0.26
FAM239A-202ENST00000438107 HILS1P60008 231 aa13.41□□□□□ -0.26
FAM239A-202ENST00000438107 HECTD1Q9ULT8 2610 aa13.41□□□□□ -0.26
FAM239A-202ENST00000438107 LY6G6DO95868 133 aa13.4□□□□□ -0.26
FAM239A-202ENST00000438107 ANK3Q12955 4377 aaKnown RBP13.4□□□□□ -0.26
FAM239A-202ENST00000438107 PAX4O43316 350 aa13.39□□□□□ -0.27
FAM239A-202ENST00000438107 SMIM9A6NGZ8 99 aa13.39□□□□□ -0.27
FAM239A-202ENST00000438107 CXCL5P42830 114 aa13.39□□□□□ -0.27
FAM239A-202ENST00000438107 OBSCN-AS1Q96MR7 158 aa13.38□□□□□ -0.27
FAM239A-202ENST00000438107 PRO0255Q9UI72 69 aa13.38□□□□□ -0.27
FAM239A-202ENST00000438107 SETXQ7Z333 2677 aaKnown RBP13.38□□□□□ -0.27
FAM239A-202ENST00000438107 GAGE2AQ6NT46 116 aa13.37□□□□□ -0.27
FAM239A-202ENST00000438107 FAM236AA0A1B0GUQ0 79 aa13.37□□□□□ -0.27
FAM239A-202ENST00000438107 FAM236BA0A1B0GV22 79 aa13.37□□□□□ -0.27
FAM239A-202ENST00000438107 X6R8D5 127 aa13.37□□□□□ -0.27
FAM239A-202ENST00000438107 XCL1P47992 114 aa13.36□□□□□ -0.27
FAM239A-202ENST00000438107 NIPBLQ6KC79 2804 aaeCLIP13.36□□□□□ -0.27
FAM239A-202ENST00000438107 ATP5G1P05496 136 aa13.35□□□□□ -0.27
FAM239A-202ENST00000438107 OR13C6PQ8NH95 151 aa13.35□□□□□ -0.27
FAM239A-202ENST00000438107 C2CD3Q4AC94 2353 aa13.34□□□□□ -0.27
FAM239A-202ENST00000438107 LECT2O14960 151 aa13.34□□□□□ -0.27
FAM239A-202ENST00000438107 SMR3AQ99954 134 aa13.34□□□□□ -0.27
FAM239A-202ENST00000438107 LINC00482Q8N8I6 264 aa13.34□□□□□ -0.27
FAM239A-202ENST00000438107 C11orf68Q9H3H3 251 aaKnown RBP13.33□□□□□ -0.28
FAM239A-202ENST00000438107 JMJD1CQ15652 2540 aa13.33□□□□□ -0.28
FAM239A-202ENST00000438107 LYRM9A8MSI8 78 aa13.32□□□□□ -0.28
FAM239A-202ENST00000438107 KLK5Q9Y337 293 aaPredicted RBP13.32□□□□□ -0.28
FAM239A-202ENST00000438107 COX17Q14061 63 aa13.31□□□□□ -0.28
FAM239A-202ENST00000438107 NOTCH2Q04721 2471 aa13.31□□□□□ -0.28
FAM239A-202ENST00000438107 A0A1B0GX51 115 aa13.31□□□□□ -0.28
FAM239A-202ENST00000438107 NDUFC2O95298 119 aa13.31□□□□□ -0.28
FAM239A-202ENST00000438107 KRTAP10-3P60369 221 aa13.3□□□□□ -0.28
FAM239A-202ENST00000438107 C9orf129Q5T035 196 aaKnown RBP13.3□□□□□ -0.28
FAM239A-202ENST00000438107 CD164L2Q6UWJ8 174 aa13.3□□□□□ -0.28
FAM239A-202ENST00000438107 C14orf132Q9NPU4 83 aa13.3□□□□□ -0.28
FAM239A-202ENST00000438107 ORMDL1Q9P0S3 153 aa13.3□□□□□ -0.28
FAM239A-202ENST00000438107 HIVEP2P31629 2446 aa13.29□□□□□ -0.28
FAM239A-202ENST00000438107 LINC00167Q96N53 147 aa13.29□□□□□ -0.28
FAM239A-202ENST00000438107 KIAA0087Q14695 138 aa13.28□□□□□ -0.28
FAM239A-202ENST00000438107 CLPSL2Q6UWE3 100 aa13.28□□□□□ -0.28
FAM239A-202ENST00000438107 IGHV4-28A0A0C4DH34 117 aa13.27□□□□□ -0.29
FAM239A-202ENST00000438107 CFAP161Q6P656 301 aa13.27□□□□□ -0.29
FAM239A-202ENST00000438107 OTOGQ6ZRI0 2925 aa13.26□□□□□ -0.29
FAM239A-202ENST00000438107 A0A096LPF7 62 aa13.25□□□□□ -0.29
FAM239A-202ENST00000438107 LINC00269Q8N2A0 174 aa13.25□□□□□ -0.29
FAM239A-202ENST00000438107 NANOS2P60321 138 aaKnown RBP13.25□□□□□ -0.29
FAM239A-202ENST00000438107 TMEM126AQ9H061 195 aa13.25□□□□□ -0.29
FAM239A-202ENST00000438107 Q6JHZ5 121 aa13.24□□□□□ -0.29
FAM239A-202ENST00000438107 CHCHD10Q8WYQ3 142 aaPredicted RBP13.24□□□□□ -0.29
FAM239A-202ENST00000438107 HIST1H4AP62805 103 aaKnown RBP13.24□□□□□ -0.29
FAM239A-202ENST00000438107 SLPIP03973 132 aa13.23□□□□□ -0.29
FAM239A-202ENST00000438107 C3orf22Q8N5N4 141 aa13.23□□□□□ -0.29
FAM239A-202ENST00000438107 NCR3O14931 201 aa13.22□□□□□ -0.29
FAM239A-202ENST00000438107 UQCRQO14949 82 aa13.22□□□□□ -0.29
FAM239A-202ENST00000438107 REG3AQ06141 175 aa13.22□□□□□ -0.29
FAM239A-202ENST00000438107 C9orf66Q5T8R8 295 aa13.22□□□□□ -0.29
FAM239A-202ENST00000438107 Q8N814 137 aa13.21□□□□□ -0.29
FAM239A-202ENST00000438107 LINC00846Q9NV44 126 aa13.21□□□□□ -0.29
FAM239A-202ENST00000438107 JMJD7-PLA2G4BH0Y9G9 81 aa13.21□□□□□ -0.3
FAM239A-202ENST00000438107 ANGP03950 147 aaKnown RBP13.21□□□□□ -0.3
FAM239A-202ENST00000438107 MUC7Q8TAX7 377 aa13.2□□□□□ -0.3
FAM239A-202ENST00000438107 TMEM256-PLSCR3K7ERE1 68 aa13.19□□□□□ -0.3
FAM239A-202ENST00000438107 ATOX1O00244 68 aa13.19□□□□□ -0.3
FAM239A-202ENST00000438107 CCKP06307 115 aa13.19□□□□□ -0.3
FAM239A-202ENST00000438107 SVIPQ8NHG7 77 aa13.19□□□□□ -0.3
FAM239A-202ENST00000438107 APOC4P55056 127 aa13.18□□□□□ -0.3
FAM239A-202ENST00000438107 PRR3P79522 188 aaKnown RBP13.18□□□□□ -0.3
FAM239A-202ENST00000438107 LINC00526Q96FQ7 95 aa13.18□□□□□ -0.3
FAM239A-202ENST00000438107 DAD1P61803 113 aa13.18□□□□□ -0.3
FAM239A-202ENST00000438107 DEFB135Q30KP9 77 aa13.17□□□□□ -0.3
FAM239A-202ENST00000438107 C9orf153Q5TBE3 101 aa13.17□□□□□ -0.3
FAM239A-202ENST00000438107 IGLV10-54A0A075B6I4 117 aa13.16□□□□□ -0.3
FAM239A-202ENST00000438107 COX7CP15954 63 aa13.16□□□□□ -0.3
FAM239A-202ENST00000438107 S100A7L2Q5SY68 101 aa13.14□□□□□ -0.31
FAM239A-202ENST00000438107 Q8N3U1 123 aa13.14□□□□□ -0.31
FAM239A-202ENST00000438107 NSD1Q96L73 2696 aaPredicted RBP13.14□□□□□ -0.31
FAM239A-202ENST00000438107 C9orf116Q5BN46 136 aaPredicted RBP13.14□□□□□ -0.31
FAM239A-202ENST00000438107 C2orf48Q96LS8 159 aa13.14□□□□□ -0.31
FAM239A-202ENST00000438107 DEFB4AO15263 64 aa13.13□□□□□ -0.31
FAM239A-202ENST00000438107 MIFP14174 115 aa13.13□□□□□ -0.31
FAM239A-202ENST00000438107 RPL18AQ02543 176 aaKnown RBP13.13□□□□□ -0.31
FAM239A-202ENST00000438107 IGKV3D-7A0A0C4DH55 119 aa13.13□□□□□ -0.31
FAM239A-202ENST00000438107 LELP1Q5T871 98 aa13.13□□□□□ -0.31
FAM239A-202ENST00000438107 INAFM1C9JVW0 142 aa13.11□□□□□ -0.31
FAM239A-202ENST00000438107 C6orf99Q4VX62 202 aa13.11□□□□□ -0.31
FAM239A-202ENST00000438107 Q8NAQ8 132 aa13.11□□□□□ -0.31
FAM239A-202ENST00000438107 A0A0J9YWU9 116 aa13.11□□□□□ -0.31
FAM239A-202ENST00000438107 IGHV4-30-4P0DP06 118 aa13.11□□□□□ -0.31
FAM239A-202ENST00000438107 SPAG11BQ08648 103 aa13.11□□□□□ -0.31
FAM239A-202ENST00000438107 SPATA3Q8NHX4 192 aa13.11□□□□□ -0.31
FAM239A-202ENST00000438107 SMIM20Q8N5G0 67 aa13.1□□□□□ -0.31
FAM239A-202ENST00000438107 Q8NDZ9 215 aa13.1□□□□□ -0.31
FAM239A-202ENST00000438107 LINC00575Q6W349 94 aa13.1□□□□□ -0.31
FAM239A-202ENST00000438107 CELA1Q9UNI1 258 aa13.1□□□□□ -0.31
FAM239A-202ENST00000438107 FN1P02751 2386 aaKnown RBP13.09□□□□□ -0.31
FAM239A-202ENST00000438107 ATP5EP2Q5VTU8 51 aa13.09□□□□□ -0.31
FAM239A-202ENST00000438107 C3orf56Q8N813 242 aa13.09□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms