RNA–Protein interactions for RNA: ENST00000437811.1

HLA-DPA1-243, Transcript of major histocompatibility complex, class II, DP alpha 1, humanhuman

Gene HLA-DPA1, Length 1,375 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPA1-243ENST00000437811 Q9HAA7 133 aa9.07□□□□□ -0.96
HLA-DPA1-243ENST00000437811 FBN3Q75N90 2809 aa9.06□□□□□ -0.96
HLA-DPA1-243ENST00000437811 FXYD2P54710 66 aa9.06□□□□□ -0.96
HLA-DPA1-243ENST00000437811 SPAG11BQ08648 103 aa9.06□□□□□ -0.96
HLA-DPA1-243ENST00000437811 CFAP161Q6P656 301 aa9.06□□□□□ -0.96
HLA-DPA1-243ENST00000437811 RMI2Q96E14 147 aa9.06□□□□□ -0.96
HLA-DPA1-243ENST00000437811 CXCL5P42830 114 aa9.05□□□□□ -0.96
HLA-DPA1-243ENST00000437811 COL5A1-AS1Q5SY13 56 aa9.05□□□□□ -0.96
HLA-DPA1-243ENST00000437811 SPANXDQ9BXN6 97 aa9.05□□□□□ -0.96
HLA-DPA1-243ENST00000437811 SPANXCQ9NY87 97 aa9.05□□□□□ -0.96
HLA-DPA1-243ENST00000437811 CIRBPQ14011 172 aaKnown RBP9.04□□□□□ -0.96
HLA-DPA1-243ENST00000437811 MEIG1Q5JSS6 88 aa9.04□□□□□ -0.96
HLA-DPA1-243ENST00000437811 ADAMTSL4-AS1Q5T5F5 129 aa9.04□□□□□ -0.96
HLA-DPA1-243ENST00000437811 WWC2-AS2Q96NR7 200 aa9.04□□□□□ -0.96
HLA-DPA1-243ENST00000437811 A6NDN8 102 aa9.03□□□□□ -0.96
HLA-DPA1-243ENST00000437811 PTTG1IPP53801 180 aa9.03□□□□□ -0.96
HLA-DPA1-243ENST00000437811 CKS1BP61024 79 aa9.03□□□□□ -0.96
HLA-DPA1-243ENST00000437811 Q6ZVH6 145 aa9.03□□□□□ -0.96
HLA-DPA1-243ENST00000437811 KRTAP1-5Q9BYS1 174 aa9.03□□□□□ -0.96
HLA-DPA1-243ENST00000437811 SMIM13P0DJ93 91 aa9.02□□□□□ -0.97
HLA-DPA1-243ENST00000437811 C2orf82Q6UX34 121 aa9.02□□□□□ -0.97
HLA-DPA1-243ENST00000437811 C15orf56Q8N910 161 aa9.02□□□□□ -0.97
HLA-DPA1-243ENST00000437811 DNAH7Q8WXX0 4024 aa9.01□□□□□ -0.97
HLA-DPA1-243ENST00000437811 A0A0U1RRA0 63 aa9□□□□□ -0.97
HLA-DPA1-243ENST00000437811 TMEM238LA0A1B0GVL6 79 aa9□□□□□ -0.97
HLA-DPA1-243ENST00000437811 IFITM1P13164 125 aa9□□□□□ -0.97
HLA-DPA1-243ENST00000437811 TTC32Q5I0X7 151 aa9□□□□□ -0.97
HLA-DPA1-243ENST00000437811 MUSTN1Q8IVN3 82 aa9□□□□□ -0.97
HLA-DPA1-243ENST00000437811 NTN5Q8WTR8 489 aaPredicted RBP9□□□□□ -0.97
HLA-DPA1-243ENST00000437811 ERG28Q9UKR5 140 aa9□□□□□ -0.97
HLA-DPA1-243ENST00000437811 HIGD2BQ4VC39 106 aa8.99□□□□□ -0.97
HLA-DPA1-243ENST00000437811 C6orf223Q8N319 242 aa8.99□□□□□ -0.97
HLA-DPA1-243ENST00000437811 DAND5Q8N907 189 aa8.99□□□□□ -0.97
HLA-DPA1-243ENST00000437811 LINC00526Q96FQ7 95 aa8.99□□□□□ -0.97
HLA-DPA1-243ENST00000437811 NHP2Q9NX24 153 aaKnown RBP8.99□□□□□ -0.97
HLA-DPA1-243ENST00000437811 COX11Q9Y6N1 276 aa8.99□□□□□ -0.97
HLA-DPA1-243ENST00000437811 GVQW2A0A096LPI5 108 aaPredicted RBP8.99□□□□□ -0.97
HLA-DPA1-243ENST00000437811 NBDYA0A0U1RRE5 68 aa8.99□□□□□ -0.97
HLA-DPA1-243ENST00000437811 A0A1B0GWB2 263 aa8.99□□□□□ -0.97
HLA-DPA1-243ENST00000437811 ZNF561-AS1K7EIQ3 104 aa8.99□□□□□ -0.97
HLA-DPA1-243ENST00000437811 RPL24P83731 157 aaKnown RBP8.99□□□□□ -0.97
HLA-DPA1-243ENST00000437811 CASC10Q5T4H9 136 aa8.99□□□□□ -0.97
HLA-DPA1-243ENST00000437811 A4D1N5 150 aa8.98□□□□□ -0.97
HLA-DPA1-243ENST00000437811 TAX1BP3O14907 124 aa8.98□□□□□ -0.97
HLA-DPA1-243ENST00000437811 LINC00158P58513 81 aa8.98□□□□□ -0.97
HLA-DPA1-243ENST00000437811 NPC2P61916 151 aa8.98□□□□□ -0.97
HLA-DPA1-243ENST00000437811 C10orf25Q5T742 122 aa8.98□□□□□ -0.97
HLA-DPA1-243ENST00000437811 UNQ6190/PRO20217Q6UXQ8 127 aa8.98□□□□□ -0.97
HLA-DPA1-243ENST00000437811 LINC00308Q8TCZ7 52 aa8.98□□□□□ -0.97
HLA-DPA1-243ENST00000437811 C2orf48Q96LS8 159 aa8.98□□□□□ -0.97
HLA-DPA1-243ENST00000437811 STARD9Q9P2P6 4700 aa8.97□□□□□ -0.97
HLA-DPA1-243ENST00000437811 PLECQ15149 4684 aaKnown RBP8.97□□□□□ -0.97
HLA-DPA1-243ENST00000437811 F8WDY8 70 aa8.97□□□□□ -0.97
HLA-DPA1-243ENST00000437811 K7ERJ3 54 aa8.97□□□□□ -0.97
HLA-DPA1-243ENST00000437811 PFN2P35080 140 aa8.97□□□□□ -0.97
HLA-DPA1-243ENST00000437811 SOSTDC1Q6X4U4 206 aa8.97□□□□□ -0.97
HLA-DPA1-243ENST00000437811 MIR7-3HGQ8N6C7 128 aa8.97□□□□□ -0.97
HLA-DPA1-243ENST00000437811 COPS9Q8WXC6 57 aa8.97□□□□□ -0.97
HLA-DPA1-243ENST00000437811 PPDPFQ9H3Y8 114 aa8.97□□□□□ -0.97
HLA-DPA1-243ENST00000437811 DNAH1Q9P2D7 4330 aa8.96□□□□□ -0.98
HLA-DPA1-243ENST00000437811 USP17L23D6RBM5 183 aa8.96□□□□□ -0.98
HLA-DPA1-243ENST00000437811 EIF4EBP3O60516 100 aaPredicted RBP8.96□□□□□ -0.98
HLA-DPA1-243ENST00000437811 TRAV16A0A0A6YYK6 109 aaPredicted RBP8.95□□□□□ -0.98
HLA-DPA1-243ENST00000437811 COX17Q14061 63 aa8.95□□□□□ -0.98
HLA-DPA1-243ENST00000437811 CAMK2N2Q96S95 79 aa8.95□□□□□ -0.98
HLA-DPA1-243ENST00000437811 C6orf48Q9UBA6 75 aa8.95□□□□□ -0.98
HLA-DPA1-243ENST00000437811 TRBV30A0A0K0K1B3 111 aa8.94□□□□□ -0.98
HLA-DPA1-243ENST00000437811 C9orf116Q5BN46 136 aaPredicted RBP8.94□□□□□ -0.98
HLA-DPA1-243ENST00000437811 CSMD3Q7Z407 3707 aa8.94□□□□□ -0.98
HLA-DPA1-243ENST00000437811 A0A0B4J2C4 111 aa8.93□□□□□ -0.98
HLA-DPA1-243ENST00000437811 A0A1B0GV90 55 aa8.93□□□□□ -0.98
HLA-DPA1-243ENST00000437811 C3orf84H3BNL1 204 aa8.93□□□□□ -0.98
HLA-DPA1-243ENST00000437811 CFC1BP0CG36 223 aa8.93□□□□□ -0.98
HLA-DPA1-243ENST00000437811 CFC1P0CG37 223 aa8.93□□□□□ -0.98
HLA-DPA1-243ENST00000437811 Q6ZRU5 148 aa8.93□□□□□ -0.98
HLA-DPA1-243ENST00000437811 RAB37Q96AX2 223 aa8.93□□□□□ -0.98
HLA-DPA1-243ENST00000437811 VPS13DQ5THJ4 4388 aa8.92□□□□□ -0.98
HLA-DPA1-243ENST00000437811 GHRHP01286 108 aa8.92□□□□□ -0.98
HLA-DPA1-243ENST00000437811 PSCAO43653 123 aa8.91□□□□□ -0.98
HLA-DPA1-243ENST00000437811 SYCNQ0VAF6 134 aa8.91□□□□□ -0.98
HLA-DPA1-243ENST00000437811 C9orf118A6NHY6 69 aa8.9□□□□□ -0.98
HLA-DPA1-243ENST00000437811 LOC107984156A0A0G2JMH3 177 aa8.89□□□□□ -0.99
HLA-DPA1-243ENST00000437811 LECT2O14960 151 aa8.89□□□□□ -0.99
HLA-DPA1-243ENST00000437811 WFDC2Q14508 124 aa8.89□□□□□ -0.99
HLA-DPA1-243ENST00000437811 Q6ZR54 194 aa8.89□□□□□ -0.99
HLA-DPA1-243ENST00000437811 Q6ZRN7 208 aaPredicted RBP8.89□□□□□ -0.99
HLA-DPA1-243ENST00000437811 ARL17AQ8IVW1 177 aa8.89□□□□□ -0.99
HLA-DPA1-243ENST00000437811 LINC00476Q8WZB0 136 aa8.89□□□□□ -0.99
HLA-DPA1-243ENST00000437811 SND1-IT1Q9HBX3 110 aa8.89□□□□□ -0.99
HLA-DPA1-243ENST00000437811 PRO1854Q9UHT4 67 aa8.89□□□□□ -0.99
HLA-DPA1-243ENST00000437811 M0R2N4 97 aa8.88□□□□□ -0.99
HLA-DPA1-243ENST00000437811 RNF151Q2KHN1 245 aa8.88□□□□□ -0.99
HLA-DPA1-243ENST00000437811 CARD19Q96LW7 228 aa8.88□□□□□ -0.99
HLA-DPA1-243ENST00000437811 H3BUT2 72 aa8.87□□□□□ -0.99
HLA-DPA1-243ENST00000437811 SLPIP03973 132 aa8.87□□□□□ -0.99
HLA-DPA1-243ENST00000437811 NAA38Q9BRA0 125 aaKnown RBP8.87□□□□□ -0.99
HLA-DPA1-243ENST00000437811 TSPAN13O95857 204 aa8.86□□□□□ -0.99
HLA-DPA1-243ENST00000437811 LY6G6CO95867 125 aa8.86□□□□□ -0.99
HLA-DPA1-243ENST00000437811 C14orf177Q52M58 125 aa8.86□□□□□ -0.99
HLA-DPA1-243ENST00000437811 NDUFC2-KCTD14E9PQ53 114 aa8.85□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms