RNA–Protein interactions for RNA: ENST00000435997.2

SPTLC1P4-201, Transcript of serine palmitoyltransferase long chain base subunit 1 pseudogene 4, humanhuman

BASIC

Gene SPTLC1P4, Length 260 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1P4-201ENST00000435997 Q8IZM0 81 aa6.48□□□□□ -1.37
SPTLC1P4-201ENST00000435997 C2orf88Q9BSF0 95 aa6.48□□□□□ -1.37
SPTLC1P4-201ENST00000435997 IGIPA6NJ69 53 aa6.47□□□□□ -1.37
SPTLC1P4-201ENST00000435997 PEA15Q15121 130 aa6.47□□□□□ -1.37
SPTLC1P4-201ENST00000435997 ZC2HC1BQ5TFG8 222 aa6.47□□□□□ -1.37
SPTLC1P4-201ENST00000435997 TP73-AS1Q9UF72 201 aa6.47□□□□□ -1.37
SPTLC1P4-201ENST00000435997 CYSLTR1Q9Y271 337 aa6.47□□□□□ -1.37
SPTLC1P4-201ENST00000435997 C22orf24Q9Y442 160 aa6.47□□□□□ -1.37
SPTLC1P4-201ENST00000435997 A0A087X002 238 aa6.46□□□□□ -1.38
SPTLC1P4-201ENST00000435997 C2orf66Q6UXQ4 117 aa6.46□□□□□ -1.38
SPTLC1P4-201ENST00000435997 Q6ZN92 141 aa6.46□□□□□ -1.38
SPTLC1P4-201ENST00000435997 LINC00469Q8N7U9 141 aa6.45□□□□□ -1.38
SPTLC1P4-201ENST00000435997 Q8N8P6 123 aa6.45□□□□□ -1.38
SPTLC1P4-201ENST00000435997 CTDSP1Q9GZU7 261 aa6.45□□□□□ -1.38
SPTLC1P4-201ENST00000435997 MAP1LC3AQ9H492 121 aa6.45□□□□□ -1.38
SPTLC1P4-201ENST00000435997 XAGE1AQ9HD64 81 aa6.45□□□□□ -1.38
SPTLC1P4-201ENST00000435997 LOC389332A0A1B0GUA5 103 aa6.44□□□□□ -1.38
SPTLC1P4-201ENST00000435997 K7EMI3 77 aa6.44□□□□□ -1.38
SPTLC1P4-201ENST00000435997 BCE1O60756 84 aa6.44□□□□□ -1.38
SPTLC1P4-201ENST00000435997 PRSS2P07478 247 aa6.44□□□□□ -1.38
SPTLC1P4-201ENST00000435997 CKS1BP61024 79 aa6.44□□□□□ -1.38
SPTLC1P4-201ENST00000435997 LBHQ53QV2 105 aaPredicted RBP6.44□□□□□ -1.38
SPTLC1P4-201ENST00000435997 MRPL55Q7Z7F7 128 aaKnown RBP6.44□□□□□ -1.38
SPTLC1P4-201ENST00000435997 A0A0U1RQV1 116 aa6.43□□□□□ -1.38
SPTLC1P4-201ENST00000435997 F8VRH5 84 aa6.43□□□□□ -1.38
SPTLC1P4-201ENST00000435997 HERVK_113P63121 156 aa6.43□□□□□ -1.38
SPTLC1P4-201ENST00000435997 ORMDL2Q53FV1 153 aa6.43□□□□□ -1.38
SPTLC1P4-201ENST00000435997 ALKBH7Q9BT30 221 aaPredicted RBP6.43□□□□□ -1.38
SPTLC1P4-201ENST00000435997 VCX2Q9H322 139 aa6.43□□□□□ -1.38
SPTLC1P4-201ENST00000435997 TOMM7Q9P0U1 55 aa6.43□□□□□ -1.38
SPTLC1P4-201ENST00000435997 CDKN2A-AS1Q9UH64 79 aa6.43□□□□□ -1.38
SPTLC1P4-201ENST00000435997 CXCL5P42830 114 aa6.42□□□□□ -1.38
SPTLC1P4-201ENST00000435997 RPL28P46779 137 aaKnown RBP6.42□□□□□ -1.38
SPTLC1P4-201ENST00000435997 C6orf226Q5I0X4 101 aa6.42□□□□□ -1.38
SPTLC1P4-201ENST00000435997 KRTAP13-1Q8IUC0 172 aa6.42□□□□□ -1.38
SPTLC1P4-201ENST00000435997 TIMM17AQ99595 171 aa6.42□□□□□ -1.38
SPTLC1P4-201ENST00000435997 KRTAP4-2Q9BYR5 136 aa6.42□□□□□ -1.38
SPTLC1P4-201ENST00000435997 SEC11AP67812 179 aa6.41□□□□□ -1.38
SPTLC1P4-201ENST00000435997 IGLV5-37A0A075B6J1 123 aa6.4□□□□□ -1.38
SPTLC1P4-201ENST00000435997 IGLV5-45A0A087WSX0 123 aa6.4□□□□□ -1.38
SPTLC1P4-201ENST00000435997 SMIM1B2RUZ4 78 aa6.4□□□□□ -1.38
SPTLC1P4-201ENST00000435997 TSPAN13O95857 204 aa6.4□□□□□ -1.38
SPTLC1P4-201ENST00000435997 CRYGAP11844 174 aa6.4□□□□□ -1.38
SPTLC1P4-201ENST00000435997 PNRC1Q12796 327 aaPredicted RBP6.4□□□□□ -1.38
SPTLC1P4-201ENST00000435997 NXT2Q9NPJ8 142 aaKnown RBP6.4□□□□□ -1.38
SPTLC1P4-201ENST00000435997 A0A1B0GVG6 124 aa6.39□□□□□ -1.39
SPTLC1P4-201ENST00000435997 KRTAP13-2Q52LG2 175 aa6.39□□□□□ -1.39
SPTLC1P4-201ENST00000435997 PAPPA-AS1Q5QFB9 102 aa6.39□□□□□ -1.39
SPTLC1P4-201ENST00000435997 TYMSOSQ8TAI1 123 aa6.39□□□□□ -1.39
SPTLC1P4-201ENST00000435997 TOMM6Q96B49 74 aa6.39□□□□□ -1.39
SPTLC1P4-201ENST00000435997 LINC00167Q96N53 147 aa6.39□□□□□ -1.39
SPTLC1P4-201ENST00000435997 ANAPC16Q96DE5 110 aa6.38□□□□□ -1.39
SPTLC1P4-201ENST00000435997 GEMIN7Q9H840 131 aaKnown RBP6.38□□□□□ -1.39
SPTLC1P4-201ENST00000435997 TINCRA0A1B0GVN0 87 aa6.37□□□□□ -1.39
SPTLC1P4-201ENST00000435997 FAM229BQ4G0N7 80 aa6.37□□□□□ -1.39
SPTLC1P4-201ENST00000435997 PDZD11Q5EBL8 140 aa6.37□□□□□ -1.39
SPTLC1P4-201ENST00000435997 ANAPC11Q9NYG5 84 aa6.37□□□□□ -1.39
SPTLC1P4-201ENST00000435997 RPL37AP8A6NKH3 93 aa6.36□□□□□ -1.39
SPTLC1P4-201ENST00000435997 G0S2P27469 103 aa6.36□□□□□ -1.39
SPTLC1P4-201ENST00000435997 TPRXLQ17RH7 258 aa6.36□□□□□ -1.39
SPTLC1P4-201ENST00000435997 ERASQ7Z444 233 aa6.36□□□□□ -1.39
SPTLC1P4-201ENST00000435997 LINC01546A6NGU7 62 aa6.35□□□□□ -1.39
SPTLC1P4-201ENST00000435997 MT-ND4LP03901 98 aa6.35□□□□□ -1.39
SPTLC1P4-201ENST00000435997 COX7B2Q8TF08 81 aa6.35□□□□□ -1.39
SPTLC1P4-201ENST00000435997 GAGE10A6NGK3 116 aa6.34□□□□□ -1.39
SPTLC1P4-201ENST00000435997 ADCYAP1P18509 176 aa6.34□□□□□ -1.39
SPTLC1P4-201ENST00000435997 CTAG1AP78358 180 aa6.34□□□□□ -1.39
SPTLC1P4-201ENST00000435997 LINC00304Q8N9R0 145 aa6.34□□□□□ -1.39
SPTLC1P4-201ENST00000435997 RETNLBQ9BQ08 111 aa6.34□□□□□ -1.39
SPTLC1P4-201ENST00000435997 SCGB3A1Q96QR1 104 aa6.33□□□□□ -1.4
SPTLC1P4-201ENST00000435997 CST9LQ9H4G1 147 aa6.33□□□□□ -1.4
SPTLC1P4-201ENST00000435997 SPINK8P0C7L1 97 aa6.32□□□□□ -1.4
SPTLC1P4-201ENST00000435997 UBE2AP49459 152 aa6.32□□□□□ -1.4
SPTLC1P4-201ENST00000435997 FAT4Q6V0I7 4981 aa6.31□□□□□ -1.4
SPTLC1P4-201ENST00000435997 IGLV5-39A0A0G2JS06 123 aa6.31□□□□□ -1.4
SPTLC1P4-201ENST00000435997 LINC01549A6NIU2 74 aa6.31□□□□□ -1.4
SPTLC1P4-201ENST00000435997 SCO1O75880 301 aa6.31□□□□□ -1.4
SPTLC1P4-201ENST00000435997 VPREB1P12018 145 aa6.31□□□□□ -1.4
SPTLC1P4-201ENST00000435997 PRLHP81277 87 aa6.31□□□□□ -1.4
SPTLC1P4-201ENST00000435997 KIAA1644Q3SXP7 199 aa6.31□□□□□ -1.4
SPTLC1P4-201ENST00000435997 NKAPP1Q8N9T2 125 aa6.31□□□□□ -1.4
SPTLC1P4-201ENST00000435997 MUC17Q685J3 4493 aa6.31□□□□□ -1.4
SPTLC1P4-201ENST00000435997 IGKV2-28A0A075B6P5 120 aa6.3□□□□□ -1.4
SPTLC1P4-201ENST00000435997 TRAV9-1A0A075B6T8 112 aa6.3□□□□□ -1.4
SPTLC1P4-201ENST00000435997 ATP5LO75964 103 aa6.3□□□□□ -1.4
SPTLC1P4-201ENST00000435997 IGKV2D-28P01615 120 aa6.3□□□□□ -1.4
SPTLC1P4-201ENST00000435997 PMVKQ15126 192 aa6.3□□□□□ -1.4
SPTLC1P4-201ENST00000435997 MRPL18Q9H0U6 180 aaKnown RBP6.3□□□□□ -1.4
SPTLC1P4-201ENST00000435997 IGLV7-46A0A075B6I9 117 aa6.29□□□□□ -1.4
SPTLC1P4-201ENST00000435997 M0R378 163 aa6.29□□□□□ -1.4
SPTLC1P4-201ENST00000435997 IGLC3P0DOY3 106 aa6.29□□□□□ -1.4
SPTLC1P4-201ENST00000435997 RAB5BP61020 215 aa6.29□□□□□ -1.4
SPTLC1P4-201ENST00000435997 TMEM126AQ9H061 195 aa6.29□□□□□ -1.4
SPTLC1P4-201ENST00000435997 IGKV2D-26A0A0A0MRZ7 120 aa6.28□□□□□ -1.4
SPTLC1P4-201ENST00000435997 TMEM238C9JI98 176 aa6.28□□□□□ -1.4
SPTLC1P4-201ENST00000435997 Q8NDZ9 215 aa6.28□□□□□ -1.4
SPTLC1P4-201ENST00000435997 CDIP1Q9H305 208 aa6.28□□□□□ -1.4
SPTLC1P4-201ENST00000435997 SND1-IT1Q9HBX3 110 aa6.28□□□□□ -1.4
SPTLC1P4-201ENST00000435997 H3BRM9 83 aa6.27□□□□□ -1.41
SPTLC1P4-201ENST00000435997 PLEKHB2Q96CS7 222 aa6.27□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms