RNA–Protein interactions for RNA: ENST00000435083.5

CHRNA1-207, Transcript of cholinergic receptor nicotinic alpha 1 subunit, humanhuman

TSL 3

Gene CHRNA1, Length 1,596 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA1-207ENST00000435083 C2orf82Q6UX34 121 aa6.87□□□□□ -1.31
CHRNA1-207ENST00000435083 TRBV30A0A0K0K1B3 111 aa6.86□□□□□ -1.31
CHRNA1-207ENST00000435083 NDUFC2-KCTD14E9PQ53 114 aa6.86□□□□□ -1.31
CHRNA1-207ENST00000435083 PACRGQ96M98 296 aaPredicted RBP6.86□□□□□ -1.31
CHRNA1-207ENST00000435083 HIST1H2BKO60814 126 aa6.86□□□□□ -1.31
CHRNA1-207ENST00000435083 TNFRSF6BO95407 300 aa6.86□□□□□ -1.31
CHRNA1-207ENST00000435083 HIST1H2BJP06899 126 aa6.86□□□□□ -1.31
CHRNA1-207ENST00000435083 HIST1H2BOP23527 126 aa6.86□□□□□ -1.31
CHRNA1-207ENST00000435083 HIST1H2BBP33778 126 aa6.86□□□□□ -1.31
CHRNA1-207ENST00000435083 HIST1H2BDP58876 126 aa6.86□□□□□ -1.31
CHRNA1-207ENST00000435083 HIST1H2BCP62807 126 aa6.86□□□□□ -1.31
CHRNA1-207ENST00000435083 RPL32P62910 135 aaKnown RBP6.86□□□□□ -1.31
CHRNA1-207ENST00000435083 HIST2H2BEQ16778 126 aa6.86□□□□□ -1.31
CHRNA1-207ENST00000435083 HIST2H2BFQ5QNW6 126 aaPredicted RBP6.86□□□□□ -1.31
CHRNA1-207ENST00000435083 HIST1H2BHQ93079 126 aa6.86□□□□□ -1.31
CHRNA1-207ENST00000435083 HIST1H2BNQ99877 126 aa6.86□□□□□ -1.31
CHRNA1-207ENST00000435083 HIST1H2BMQ99879 126 aa6.86□□□□□ -1.31
CHRNA1-207ENST00000435083 SMIM2Q9BVW6 85 aa6.86□□□□□ -1.31
CHRNA1-207ENST00000435083 A0A087X002 238 aa6.83□□□□□ -1.32
CHRNA1-207ENST00000435083 NUPR1O60356 82 aa6.83□□□□□ -1.32
CHRNA1-207ENST00000435083 LINC00242Q5T6M2 205 aa6.83□□□□□ -1.32
CHRNA1-207ENST00000435083 LINC00469Q8N7U9 141 aa6.83□□□□□ -1.32
CHRNA1-207ENST00000435083 TYMSOSQ8TAI1 123 aa6.83□□□□□ -1.32
CHRNA1-207ENST00000435083 C22orf24Q9Y442 160 aa6.83□□□□□ -1.32
CHRNA1-207ENST00000435083 D6R8Y8 96 aa6.82□□□□□ -1.32
CHRNA1-207ENST00000435083 NPYP01303 97 aa6.82□□□□□ -1.32
CHRNA1-207ENST00000435083 IFI27P40305 119 aaPredicted RBP6.82□□□□□ -1.32
CHRNA1-207ENST00000435083 NDUFA6P56556 154 aa6.82□□□□□ -1.32
CHRNA1-207ENST00000435083 COA6Q5JTJ3 125 aaKnown RBP6.82□□□□□ -1.32
CHRNA1-207ENST00000435083 C5orf52A6NGY3 159 aa6.82□□□□□ -1.32
CHRNA1-207ENST00000435083 PPBPP02775 128 aa6.82□□□□□ -1.32
CHRNA1-207ENST00000435083 CRYGAP11844 174 aa6.82□□□□□ -1.32
CHRNA1-207ENST00000435083 LBHQ53QV2 105 aaPredicted RBP6.82□□□□□ -1.32
CHRNA1-207ENST00000435083 IGLV4-3A0A075B6K6 122 aa6.81□□□□□ -1.32
CHRNA1-207ENST00000435083 PRSS2P07478 247 aa6.81□□□□□ -1.32
CHRNA1-207ENST00000435083 RPL28P46779 137 aaKnown RBP6.81□□□□□ -1.32
CHRNA1-207ENST00000435083 XAGE1AQ9HD64 81 aa6.81□□□□□ -1.32
CHRNA1-207ENST00000435083 TOMM7Q9P0U1 55 aa6.81□□□□□ -1.32
CHRNA1-207ENST00000435083 LAMTOR2Q9Y2Q5 125 aa6.81□□□□□ -1.32
CHRNA1-207ENST00000435083 FAT4Q6V0I7 4981 aa6.8□□□□□ -1.32
CHRNA1-207ENST00000435083 CKS1BP61024 79 aa6.8□□□□□ -1.32
CHRNA1-207ENST00000435083 SNRPEP62304 92 aaKnown RBP6.8□□□□□ -1.32
CHRNA1-207ENST00000435083 KIAA1644Q3SXP7 199 aa6.8□□□□□ -1.32
CHRNA1-207ENST00000435083 BAGE3Q86Y29 109 aa6.8□□□□□ -1.32
CHRNA1-207ENST00000435083 ORMDL3Q8N138 153 aa6.8□□□□□ -1.32
CHRNA1-207ENST00000435083 TMEM141Q96I45 108 aa6.8□□□□□ -1.32
CHRNA1-207ENST00000435083 RETNLBQ9BQ08 111 aa6.8□□□□□ -1.32
CHRNA1-207ENST00000435083 ALKBH7Q9BT30 221 aaPredicted RBP6.8□□□□□ -1.32
CHRNA1-207ENST00000435083 S100A2P29034 98 aa6.79□□□□□ -1.32
CHRNA1-207ENST00000435083 C6orf226Q5I0X4 101 aa6.79□□□□□ -1.32
CHRNA1-207ENST00000435083 TEX43Q6ZNM6 134 aa6.79□□□□□ -1.32
CHRNA1-207ENST00000435083 LINC01561Q8N1V8 128 aa6.79□□□□□ -1.32
CHRNA1-207ENST00000435083 ANAPC11Q9NYG5 84 aa6.79□□□□□ -1.32
CHRNA1-207ENST00000435083 PYGO1Q9Y3Y4 419 aa6.79□□□□□ -1.32
CHRNA1-207ENST00000435083 BCE1O60756 84 aa6.78□□□□□ -1.32
CHRNA1-207ENST00000435083 Q6ZN92 141 aa6.78□□□□□ -1.32
CHRNA1-207ENST00000435083 CDIP1Q9H305 208 aa6.78□□□□□ -1.32
CHRNA1-207ENST00000435083 ZC2HC1BQ5TFG8 222 aa6.78□□□□□ -1.32
CHRNA1-207ENST00000435083 MRPL55Q7Z7F7 128 aaKnown RBP6.78□□□□□ -1.32
CHRNA1-207ENST00000435083 C18orf32Q8TCD1 76 aa6.78□□□□□ -1.32
CHRNA1-207ENST00000435083 PRELID3AQ96N28 172 aa6.78□□□□□ -1.32
CHRNA1-207ENST00000435083 C2orf88Q9BSF0 95 aa6.78□□□□□ -1.32
CHRNA1-207ENST00000435083 CHCHD1Q96BP2 118 aaKnown RBP6.77□□□□□ -1.33
CHRNA1-207ENST00000435083 RPL37AP8A6NKH3 93 aa6.76□□□□□ -1.33
CHRNA1-207ENST00000435083 Q8IZM0 81 aa6.76□□□□□ -1.33
CHRNA1-207ENST00000435083 HIST3H2BBQ8N257 126 aa6.76□□□□□ -1.33
CHRNA1-207ENST00000435083 MAP1LC3AQ9H492 121 aa6.76□□□□□ -1.33
CHRNA1-207ENST00000435083 TP73-AS1Q9UF72 201 aa6.76□□□□□ -1.33
CHRNA1-207ENST00000435083 LOC389332A0A1B0GUA5 103 aa6.75□□□□□ -1.33
CHRNA1-207ENST00000435083 SERF1AO75920 110 aa6.75□□□□□ -1.33
CHRNA1-207ENST00000435083 KRTAP13-2Q52LG2 175 aa6.75□□□□□ -1.33
CHRNA1-207ENST00000435083 VCX2Q9H322 139 aa6.75□□□□□ -1.33
CHRNA1-207ENST00000435083 HSBP1O75506 76 aa6.74□□□□□ -1.33
CHRNA1-207ENST00000435083 LINC00173Q6ZV60 143 aa6.74□□□□□ -1.33
CHRNA1-207ENST00000435083 FA2HQ7L5A8 372 aa6.74□□□□□ -1.33
CHRNA1-207ENST00000435083 LINC00304Q8N9R0 145 aa6.74□□□□□ -1.33
CHRNA1-207ENST00000435083 LINC00167Q96N53 147 aa6.74□□□□□ -1.33
CHRNA1-207ENST00000435083 NXT2Q9NPJ8 142 aaKnown RBP6.74□□□□□ -1.33
CHRNA1-207ENST00000435083 IGLV7-46A0A075B6I9 117 aa6.74□□□□□ -1.33
CHRNA1-207ENST00000435083 GAGE10A6NGK3 116 aa6.74□□□□□ -1.33
CHRNA1-207ENST00000435083 F8VRH5 84 aa6.74□□□□□ -1.33
CHRNA1-207ENST00000435083 LINC00614P0C842 121 aa6.74□□□□□ -1.33
CHRNA1-207ENST00000435083 AKR1D1P51857 326 aa6.74□□□□□ -1.33
CHRNA1-207ENST00000435083 TPRXLQ17RH7 258 aa6.74□□□□□ -1.33
CHRNA1-207ENST00000435083 PDZD11Q5EBL8 140 aa6.74□□□□□ -1.33
CHRNA1-207ENST00000435083 AMELXQ99217 191 aa6.74□□□□□ -1.33
CHRNA1-207ENST00000435083 CYSLTR1Q9Y271 337 aa6.74□□□□□ -1.33
CHRNA1-207ENST00000435083 PRSS47A8MTI9 375 aa6.73□□□□□ -1.33
CHRNA1-207ENST00000435083 FABP4P15090 132 aa6.73□□□□□ -1.33
CHRNA1-207ENST00000435083 UBE2AP49459 152 aa6.73□□□□□ -1.33
CHRNA1-207ENST00000435083 C2orf66Q6UXQ4 117 aa6.73□□□□□ -1.33
CHRNA1-207ENST00000435083 HIST1H2BLQ99880 126 aa6.73□□□□□ -1.33
CHRNA1-207ENST00000435083 K7EMI3 77 aa6.72□□□□□ -1.33
CHRNA1-207ENST00000435083 IGKV2D-26A0A0A0MRZ7 120 aa6.71□□□□□ -1.34
CHRNA1-207ENST00000435083 LINC00310P59036 64 aa6.71□□□□□ -1.34
CHRNA1-207ENST00000435083 CDKN2A-AS1Q9UH64 79 aa6.71□□□□□ -1.34
CHRNA1-207ENST00000435083 HERVK_113P63121 156 aa6.7□□□□□ -1.34
CHRNA1-207ENST00000435083 FAM229BQ4G0N7 80 aa6.7□□□□□ -1.34
CHRNA1-207ENST00000435083 FAM19A3Q7Z5A8 133 aa6.7□□□□□ -1.34
CHRNA1-207ENST00000435083 Q8N8P6 123 aa6.7□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 59.7 ms