RNA–Protein interactions for RNA: ENST00000432645.6

HDAC9-212, Transcript of histone deacetylase 9, humanhuman

TSL 1 (best) BASIC

Gene HDAC9, Length 3,099 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-212ENST00000432645 TMEM223A0PJW6 202 aa5.88□□□□□ -1.47
HDAC9-212ENST00000432645 DEFB121Q5J5C9 76 aa5.88□□□□□ -1.47
HDAC9-212ENST00000432645 UBE2WQ96B02 151 aa5.88□□□□□ -1.47
HDAC9-212ENST00000432645 LGALS3P17931 250 aaKnown RBP5.88□□□□□ -1.47
HDAC9-212ENST00000432645 FP248Q71RG6 208 aaPredicted RBP5.88□□□□□ -1.47
HDAC9-212ENST00000432645 X6R8D5 127 aa5.88□□□□□ -1.47
HDAC9-212ENST00000432645 PKD1L1Q8TDX9 2849 aa5.88□□□□□ -1.47
HDAC9-212ENST00000432645 STAB1Q9NY15 2570 aa5.88□□□□□ -1.47
HDAC9-212ENST00000432645 FHL2Q14192 279 aa5.88□□□□□ -1.47
HDAC9-212ENST00000432645 DAZ4Q86SG3 579 aaKnown RBP5.88□□□□□ -1.47
HDAC9-212ENST00000432645 DAZ3Q9NR90 486 aaKnown RBP5.88□□□□□ -1.47
HDAC9-212ENST00000432645 MRPS36P82909 103 aaKnown RBP5.87□□□□□ -1.47
HDAC9-212ENST00000432645 LINC00643Q86TS7 51 aa5.87□□□□□ -1.47
HDAC9-212ENST00000432645 SERP2Q8N6R1 65 aa5.87□□□□□ -1.47
HDAC9-212ENST00000432645 C11orf45Q8TAV5 145 aa5.87□□□□□ -1.47
HDAC9-212ENST00000432645 A0A0J9YY99 117 aa5.87□□□□□ -1.47
HDAC9-212ENST00000432645 ACYP1P07311 99 aa5.87□□□□□ -1.47
HDAC9-212ENST00000432645 TRBV6-4A0A1B0GX49 114 aa5.86□□□□□ -1.47
HDAC9-212ENST00000432645 H3BS24 57 aa5.86□□□□□ -1.47
HDAC9-212ENST00000432645 J3QL48 77 aa5.86□□□□□ -1.47
HDAC9-212ENST00000432645 EIF4EBP3O60516 100 aaPredicted RBP5.86□□□□□ -1.47
HDAC9-212ENST00000432645 MRPL55Q7Z7F7 128 aaKnown RBP5.86□□□□□ -1.47
HDAC9-212ENST00000432645 CFC1BP0CG36 223 aa5.86□□□□□ -1.47
HDAC9-212ENST00000432645 CFC1P0CG37 223 aa5.86□□□□□ -1.47
HDAC9-212ENST00000432645 IGHV3-30-3P0DP02 117 aa5.86□□□□□ -1.47
HDAC9-212ENST00000432645 FAM222AQ5U5X8 452 aa5.86□□□□□ -1.47
HDAC9-212ENST00000432645 PRR15Q8IV56 129 aa5.86□□□□□ -1.47
HDAC9-212ENST00000432645 TIMM21Q9BVV7 248 aa5.86□□□□□ -1.47
HDAC9-212ENST00000432645 UBE2L6O14933 153 aa5.85□□□□□ -1.47
HDAC9-212ENST00000432645 LEPROTO15243 131 aa5.85□□□□□ -1.47
HDAC9-212ENST00000432645 COX6A2Q02221 97 aa5.85□□□□□ -1.47
HDAC9-212ENST00000432645 CDKN2A-AS1Q9UH64 79 aa5.85□□□□□ -1.47
HDAC9-212ENST00000432645 MAST4O15021 2626 aa5.85□□□□□ -1.47
HDAC9-212ENST00000432645 A0A096LPF7 62 aa5.85□□□□□ -1.47
HDAC9-212ENST00000432645 KRTAP24-1Q3LI83 254 aa5.85□□□□□ -1.47
HDAC9-212ENST00000432645 IGKV3OR2-268A0A0C4DH90 116 aa5.85□□□□□ -1.47
HDAC9-212ENST00000432645 SDIM1Q6ZPB5 146 aa5.85□□□□□ -1.47
HDAC9-212ENST00000432645 WFDC9Q8NEX5 89 aa5.85□□□□□ -1.47
HDAC9-212ENST00000432645 ANK2Q01484 3957 aa5.85□□□□□ -1.47
HDAC9-212ENST00000432645 CYSRT1A8MQ03 144 aa5.84□□□□□ -1.47
HDAC9-212ENST00000432645 IGHV4-30-4P0DP06 118 aa5.84□□□□□ -1.47
HDAC9-212ENST00000432645 TMEM243Q9BU79 118 aa5.84□□□□□ -1.47
HDAC9-212ENST00000432645 TRBV10-2A0A0K0K1G8 114 aa5.84□□□□□ -1.47
HDAC9-212ENST00000432645 IGHV3-30P01768 117 aa5.84□□□□□ -1.47
HDAC9-212ENST00000432645 IGHV3-30-5P0DP03 117 aa5.84□□□□□ -1.47
HDAC9-212ENST00000432645 APOC4P55056 127 aa5.84□□□□□ -1.47
HDAC9-212ENST00000432645 RPL18AQ02543 176 aaKnown RBP5.84□□□□□ -1.47
HDAC9-212ENST00000432645 BAHCC1Q9P281 2608 aa5.83□□□□□ -1.48
HDAC9-212ENST00000432645 GYPEP15421 78 aa5.83□□□□□ -1.48
HDAC9-212ENST00000432645 IGHV4-28A0A0C4DH34 117 aa5.83□□□□□ -1.48
HDAC9-212ENST00000432645 IGHV1-58A0A0C4DH39 117 aa5.83□□□□□ -1.48
HDAC9-212ENST00000432645 LINC00242Q5T6M2 205 aa5.83□□□□□ -1.48
HDAC9-212ENST00000432645 CDC42SE2Q9NRR3 84 aa5.83□□□□□ -1.48
HDAC9-212ENST00000432645 PAX4O43316 350 aa5.83□□□□□ -1.48
HDAC9-212ENST00000432645 VSIG2Q96IQ7 327 aa5.83□□□□□ -1.48
HDAC9-212ENST00000432645 TRBV6-8A0A0A6YYG3 113 aa5.82□□□□□ -1.48
HDAC9-212ENST00000432645 IGLV4-60A0A075B6I1 120 aa5.82□□□□□ -1.48
HDAC9-212ENST00000432645 A0A0J9YXY3 114 aa5.82□□□□□ -1.48
HDAC9-212ENST00000432645 LAMTOR3Q9UHA4 124 aa5.82□□□□□ -1.48
HDAC9-212ENST00000432645 NDUFA12Q9UI09 145 aa5.82□□□□□ -1.48
HDAC9-212ENST00000432645 CELA1Q9UNI1 258 aa5.82□□□□□ -1.48
HDAC9-212ENST00000432645 LINC00612Q8N6U2 182 aa5.81□□□□□ -1.48
HDAC9-212ENST00000432645 PRSS2P07478 247 aa5.81□□□□□ -1.48
HDAC9-212ENST00000432645 HTN3P15516 51 aa5.81□□□□□ -1.48
HDAC9-212ENST00000432645 ATXN8Q156A1 80 aa5.81□□□□□ -1.48
HDAC9-212ENST00000432645 LCE2DQ5TA82 110 aaPredicted RBP5.81□□□□□ -1.48
HDAC9-212ENST00000432645 CD164L2Q6UWJ8 174 aa5.81□□□□□ -1.48
HDAC9-212ENST00000432645 MUSTN1Q8IVN3 82 aa5.81□□□□□ -1.48
HDAC9-212ENST00000432645 COL6A5A8TX70 2615 aa5.81□□□□□ -1.48
HDAC9-212ENST00000432645 KRTAP10-11P60412 298 aa5.8□□□□□ -1.48
HDAC9-212ENST00000432645 DAD1P61803 113 aa5.8□□□□□ -1.48
HDAC9-212ENST00000432645 ZNF625Q96I27 306 aaPredicted RBP5.8□□□□□ -1.48
HDAC9-212ENST00000432645 PRO1854Q9UHT4 67 aa5.8□□□□□ -1.48
HDAC9-212ENST00000432645 PRO0255Q9UI72 69 aa5.8□□□□□ -1.48
HDAC9-212ENST00000432645 TRBV7-6A0A0J9YX20 115 aa5.8□□□□□ -1.48
HDAC9-212ENST00000432645 SMCR5Q8TEV8 140 aa5.8□□□□□ -1.48
HDAC9-212ENST00000432645 LYRM9A8MSI8 78 aa5.8□□□□□ -1.48
HDAC9-212ENST00000432645 ADAMTSL4-AS1Q5T5F5 129 aa5.8□□□□□ -1.48
HDAC9-212ENST00000432645 DAND5Q8N907 189 aa5.8□□□□□ -1.48
HDAC9-212ENST00000432645 Q8NAQ8 132 aa5.8□□□□□ -1.48
HDAC9-212ENST00000432645 COPS9Q8WXC6 57 aa5.8□□□□□ -1.48
HDAC9-212ENST00000432645 Q1RN00 199 aa5.79□□□□□ -1.48
HDAC9-212ENST00000432645 IGLV5-45A0A087WSX0 123 aa5.79□□□□□ -1.48
HDAC9-212ENST00000432645 IGHV3-33P01772 117 aa5.79□□□□□ -1.48
HDAC9-212ENST00000432645 SS18Q15532 418 aa5.79□□□□□ -1.48
HDAC9-212ENST00000432645 CLPSL2Q6UWE3 100 aa5.78□□□□□ -1.48
HDAC9-212ENST00000432645 KRTAP3-3Q9BYR6 98 aa5.78□□□□□ -1.48
HDAC9-212ENST00000432645 KRTAP3-2Q9BYR7 98 aa5.78□□□□□ -1.48
HDAC9-212ENST00000432645 NOTCH1P46531 2555 aa5.78□□□□□ -1.48
HDAC9-212ENST00000432645 SMIM1B2RUZ4 78 aa5.78□□□□□ -1.48
HDAC9-212ENST00000432645 C2orf82Q6UX34 121 aa5.78□□□□□ -1.48
HDAC9-212ENST00000432645 RBM12B-AS1Q9P1G2 102 aa5.78□□□□□ -1.48
HDAC9-212ENST00000432645 MIFP14174 115 aa5.78□□□□□ -1.48
HDAC9-212ENST00000432645 LITAFQ99732 161 aa5.78□□□□□ -1.48
HDAC9-212ENST00000432645 Q9H8V8 135 aa5.78□□□□□ -1.48
HDAC9-212ENST00000432645 CMYA5Q8N3K9 4069 aa5.77□□□□□ -1.49
HDAC9-212ENST00000432645 H7C423 109 aa5.77□□□□□ -1.49
HDAC9-212ENST00000432645 SPART-AS1P0CW21 52 aa5.77□□□□□ -1.49
HDAC9-212ENST00000432645 Q8N3U1 123 aa5.77□□□□□ -1.49
HDAC9-212ENST00000432645 TOMM7Q9P0U1 55 aa5.76□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 10 ms