RNA–Protein interactions for RNA: ENST00000431429.1

HMGB1P27-201, Transcript of high mobility group box 1 pseudogene 27, humanhuman

BASIC

Gene HMGB1P27, Length 603 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P27-201ENST00000431429 EDF1O60869 148 aaKnown RBP1□□□□□ -2.25
HMGB1P27-201ENST00000431429 IGHV3-30P01768 117 aa1□□□□□ -2.25
HMGB1P27-201ENST00000431429 IGHV3-33P01772 117 aa1□□□□□ -2.25
HMGB1P27-201ENST00000431429 CRPP02741 224 aa1□□□□□ -2.25
HMGB1P27-201ENST00000431429 SLC25A5P05141 298 aaKnown RBP1□□□□□ -2.25
HMGB1P27-201ENST00000431429 IGHV3-30-5P0DP03 117 aa1□□□□□ -2.25
HMGB1P27-201ENST00000431429 PKIAP61925 76 aa1□□□□□ -2.25
HMGB1P27-201ENST00000431429 HIST1H1AQ02539 215 aaPredicted RBP1□□□□□ -2.25
HMGB1P27-201ENST00000431429 CIRBPQ14011 172 aaKnown RBP1□□□□□ -2.25
HMGB1P27-201ENST00000431429 RHEBQ15382 184 aa1□□□□□ -2.25
HMGB1P27-201ENST00000431429 GOLT1AQ6ZVE7 132 aa1□□□□□ -2.25
HMGB1P27-201ENST00000431429 SREK1IP1Q8N9Q2 155 aaPredicted RBP1□□□□□ -2.25
HMGB1P27-201ENST00000431429 DIRC1Q969H9 104 aa1□□□□□ -2.25
HMGB1P27-201ENST00000431429 GPR146Q96CH1 333 aa1□□□□□ -2.25
HMGB1P27-201ENST00000431429 RETNLBQ9BQ08 111 aa1□□□□□ -2.25
HMGB1P27-201ENST00000431429 C9orf16Q9BUW7 83 aa1□□□□□ -2.25
HMGB1P27-201ENST00000431429 PBDC1Q9BVG4 233 aa1□□□□□ -2.25
HMGB1P27-201ENST00000431429 OSTCQ9NRP0 149 aa1□□□□□ -2.25
HMGB1P27-201ENST00000431429 EPDR1Q9UM22 224 aa1□□□□□ -2.25
HMGB1P27-201ENST00000431429 SSR3Q9UNL2 185 aa1□□□□□ -2.25
HMGB1P27-201ENST00000431429 TRAV12-3A0A0B4J271 114 aa0.99□□□□□ -2.25
HMGB1P27-201ENST00000431429 NMBP08949 121 aa0.99□□□□□ -2.25
HMGB1P27-201ENST00000431429 OR4E1P0C645 316 aa0.99□□□□□ -2.25
HMGB1P27-201ENST00000431429 IGLC1P0CG04 106 aa0.99□□□□□ -2.25
HMGB1P27-201ENST00000431429 SMIM17P0DL12 118 aa0.99□□□□□ -2.25
HMGB1P27-201ENST00000431429 RPL7P18124 248 aaKnown RBP0.99□□□□□ -2.25
HMGB1P27-201ENST00000431429 QRFPP83859 136 aa0.99□□□□□ -2.25
HMGB1P27-201ENST00000431429 PDE6HQ13956 83 aa0.99□□□□□ -2.25
HMGB1P27-201ENST00000431429 WFDC2Q14508 124 aa0.99□□□□□ -2.25
HMGB1P27-201ENST00000431429 RHOHQ15669 191 aa0.99□□□□□ -2.25
HMGB1P27-201ENST00000431429 HSD17B12Q53GQ0 312 aa0.99□□□□□ -2.25
HMGB1P27-201ENST00000431429 HACD4Q5VWC8 232 aa0.99□□□□□ -2.25
HMGB1P27-201ENST00000431429 C12orf73Q69YU5 71 aa0.99□□□□□ -2.25
HMGB1P27-201ENST00000431429 TSKUQ8WUA8 353 aa0.99□□□□□ -2.25
HMGB1P27-201ENST00000431429 LPAR5Q9H1C0 372 aa0.99□□□□□ -2.25
HMGB1P27-201ENST00000431429 MED9Q9NWA0 146 aa0.99□□□□□ -2.25
HMGB1P27-201ENST00000431429 U3KQ87 197 aa0.99□□□□□ -2.25
HMGB1P27-201ENST00000431429 PIGBOS1A0A0B4J2F0 54 aa0.98□□□□□ -2.25
HMGB1P27-201ENST00000431429 TRBV6-4A0A1B0GX49 114 aa0.98□□□□□ -2.25
HMGB1P27-201ENST00000431429 TMEM262E9PQX1 116 aa0.98□□□□□ -2.25
HMGB1P27-201ENST00000431429 PPYP01298 95 aa0.98□□□□□ -2.25
HMGB1P27-201ENST00000431429 MT-ND6P03923 174 aa0.98□□□□□ -2.25
HMGB1P27-201ENST00000431429 MGST1P10620 155 aaKnown RBP0.98□□□□□ -2.25
HMGB1P27-201ENST00000431429 S100A4P26447 101 aaKnown RBP0.98□□□□□ -2.25
HMGB1P27-201ENST00000431429 GTF2A1P52655 376 aaPredicted RBP0.98□□□□□ -2.25
HMGB1P27-201ENST00000431429 PIGPP57054 158 aa0.98□□□□□ -2.25
HMGB1P27-201ENST00000431429 DEFA3P59666 94 aa0.98□□□□□ -2.25
HMGB1P27-201ENST00000431429 DEFB1P60022 68 aa0.98□□□□□ -2.25
HMGB1P27-201ENST00000431429 RPS25P62851 125 aaKnown RBP0.98□□□□□ -2.25
HMGB1P27-201ENST00000431429 ASB16-AS1Q495Z4 193 aa0.98□□□□□ -2.25
HMGB1P27-201ENST00000431429 KHDC3LQ587J8 217 aa0.98□□□□□ -2.25
HMGB1P27-201ENST00000431429 ZNF431Q8TF32 576 aaPredicted RBP0.98□□□□□ -2.25
HMGB1P27-201ENST00000431429 ODF3Q96PU9 254 aa0.98□□□□□ -2.25
HMGB1P27-201ENST00000431429 SLC50A1Q9BRV3 221 aa0.98□□□□□ -2.25
HMGB1P27-201ENST00000431429 TMEM126AQ9H061 195 aa0.98□□□□□ -2.25
HMGB1P27-201ENST00000431429 C7orf71A4D174 169 aa0.97□□□□□ -2.25
HMGB1P27-201ENST00000431429 GPR31O00270 319 aa0.97□□□□□ -2.25
HMGB1P27-201ENST00000431429 PDCD5O14737 125 aa0.97□□□□□ -2.25
HMGB1P27-201ENST00000431429 BAALC-AS2P0C853 105 aa0.97□□□□□ -2.25
HMGB1P27-201ENST00000431429 HIST1H1DP16402 221 aaKnown RBP0.97□□□□□ -2.25
HMGB1P27-201ENST00000431429 GNG2P59768 71 aa0.97□□□□□ -2.25
HMGB1P27-201ENST00000431429 EIF5AP63241 154 aaKnown RBP0.97□□□□□ -2.25
HMGB1P27-201ENST00000431429 COX6A2Q02221 97 aa0.97□□□□□ -2.25
HMGB1P27-201ENST00000431429 KRTAP20-1Q3LI63 56 aa0.97□□□□□ -2.25
HMGB1P27-201ENST00000431429 SPANXN5Q5MJ07 72 aa0.97□□□□□ -2.25
HMGB1P27-201ENST00000431429 DEFB107AQ8IZN7 70 aa0.97□□□□□ -2.25
HMGB1P27-201ENST00000431429 CANT1Q8WVQ1 401 aa0.97□□□□□ -2.25
HMGB1P27-201ENST00000431429 TRGV9Q99603 122 aa0.97□□□□□ -2.25
HMGB1P27-201ENST00000431429 LPAP08519 4548 aa0.96□□□□□ -2.26
HMGB1P27-201ENST00000431429 PNMA8CA0A1B0GUJ8 204 aa0.96□□□□□ -2.26
HMGB1P27-201ENST00000431429 CEBPZOSA8MTT3 80 aa0.96□□□□□ -2.26
HMGB1P27-201ENST00000431429 M0R129 80 aa0.96□□□□□ -2.26
HMGB1P27-201ENST00000431429 M0R2P5 195 aa0.96□□□□□ -2.26
HMGB1P27-201ENST00000431429 M0R378 163 aa0.96□□□□□ -2.26
HMGB1P27-201ENST00000431429 HYPMO75409 117 aa0.96□□□□□ -2.26
HMGB1P27-201ENST00000431429 ANGP03950 147 aaKnown RBP0.96□□□□□ -2.26
HMGB1P27-201ENST00000431429 SFTA3P0C7M3 94 aa0.96□□□□□ -2.26
HMGB1P27-201ENST00000431429 FXYD4P59646 89 aa0.96□□□□□ -2.26
HMGB1P27-201ENST00000431429 SPINK9Q5DT21 86 aa0.96□□□□□ -2.26
HMGB1P27-201ENST00000431429 C1orf137Q5JT78 98 aa0.96□□□□□ -2.26
HMGB1P27-201ENST00000431429 TMEM78Q5T7P6 136 aa0.96□□□□□ -2.26
HMGB1P27-201ENST00000431429 EIF5AL1Q6IS14 154 aaKnown RBP0.96□□□□□ -2.26
HMGB1P27-201ENST00000431429 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP0.96□□□□□ -2.26
HMGB1P27-201ENST00000431429 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa0.96□□□□□ -2.26
HMGB1P27-201ENST00000431429 ZNF818PQ6ZRF7 136 aa0.96□□□□□ -2.26
HMGB1P27-201ENST00000431429 MAFIPQ8WZ33 124 aa0.96□□□□□ -2.26
HMGB1P27-201ENST00000431429 HIST1H2BLQ99880 126 aa0.96□□□□□ -2.26
HMGB1P27-201ENST00000431429 IMUPQ9GZP8 106 aa0.96□□□□□ -2.26
HMGB1P27-201ENST00000431429 ATG5Q9H1Y0 275 aa0.96□□□□□ -2.26
HMGB1P27-201ENST00000431429 NHP2Q9NX24 153 aaKnown RBP0.96□□□□□ -2.26
HMGB1P27-201ENST00000431429 HIGD1AQ9Y241 93 aa0.96□□□□□ -2.26
HMGB1P27-201ENST00000431429 EFCAB10A6NFE3 127 aa0.95□□□□□ -2.26
HMGB1P27-201ENST00000431429 A8MWV9 139 aa0.95□□□□□ -2.26
HMGB1P27-201ENST00000431429 TMEM238C9JI98 176 aa0.95□□□□□ -2.26
HMGB1P27-201ENST00000431429 IL5P05113 134 aa0.95□□□□□ -2.26
HMGB1P27-201ENST00000431429 ENHOQ6UWT2 76 aa0.95□□□□□ -2.26
HMGB1P27-201ENST00000431429 COX6B2Q6YFQ2 88 aa0.95□□□□□ -2.26
HMGB1P27-201ENST00000431429 EXOC3-AS1Q8N2X6 119 aa0.95□□□□□ -2.26
HMGB1P27-201ENST00000431429 PRRT1Q99946 306 aa0.95□□□□□ -2.26
HMGB1P27-201ENST00000431429 MRPL36Q9P0J6 103 aaKnown RBP0.95□□□□□ -2.26
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms